EnhancerDB
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  3. vista5026[chr1:212855580-212855934]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5026[chr1:212855580-212855934]
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Tissue distribution of vista5026
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Transcription factor that possibly regulate vista5026[chr1:212855580-212855934]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212855564 212855583 RFX2 JASPAR yes 35147178
chr1 212855564 212855583 RFX2 JASPAR yes 118455104
chr1 212855577 212855592 HNF1A JASPAR yes 35147180
chr1 212855577 212855592 HNF1A JASPAR yes 118455105
chr1 212855584 212855596 HLF JASPAR yes 35147181
chr1 212855584 212855596 HLF JASPAR yes 118455106
chr1 212855608 212855618 ZNF740 JASPAR yes 35147182
chr1 212855608 212855618 ZNF740 JASPAR yes 118455107
chr1 212855632 212855637 SP1 TRANSFAC yes 35147183
chr1 212855632 212855637 SP1 TRANSFAC yes 118455108
chr1 212855636 212855640 H1TF2 TRANSFAC yes 35147184
chr1 212855636 212855640 NFE TRANSFAC yes 35147185
chr1 212855636 212855640 SRF TRANSFAC yes 35147186
chr1 212855636 212855640 H1TF2 TRANSFAC yes 118455109
chr1 212855636 212855640 NFE TRANSFAC yes 118455110
chr1 212855636 212855640 SRF TRANSFAC yes 118455111
chr1 212855662 212855667 GATA2 JASPAR yes 35147187
chr1 212855662 212855667 GATA2 JASPAR yes 118455112
chr1 212855672 212855687 IRF9 JASPAR yes 35147188
chr1 212855672 212855687 IRF9 JASPAR yes 118455113
chr1 212855688 212855691 MYB TRANSFAC yes 35147189
chr1 212855688 212855691 MYB TRANSFAC yes 118455114
chr1 212855695 212855708 ZBTB18 JASPAR yes 35147190
chr1 212855695 212855708 ZBTB18 JASPAR yes 118455115
chr1 212855695 212855710 HSF1 JASPAR yes 35147191
chr1 212855695 212855710 HSF1 JASPAR yes 118455116
chr1 212855696 212855709 HSF2 JASPAR yes 35147192
chr1 212855696 212855709 HSF2 JASPAR yes 118455117
chr1 212855701 212855712 NFE2 JASPAR yes 35147193
chr1 212855701 212855712 NFE2 JASPAR yes 118455118
chr1 212855716 212855722 HiNF-A TRANSFAC yes 35147194
chr1 212855716 212855722 HiNF-A TRANSFAC yes 118455119
chr1 212855720 212855736 POU4F2 JASPAR yes 35147195
chr1 212855720 212855736 POU4F2 JASPAR yes 118455120
chr1 212855738 212855755 ZNF410 JASPAR yes 35147196
chr1 212855738 212855755 ZNF410 JASPAR yes 118455121
chr1 212855756 212855761 ETS2 TRANSFAC yes 35147197
chr1 212855756 212855761 ETS2 TRANSFAC yes 118455122
chr1 212855756 212855766 NFKB1 JASPAR yes 35147198
chr1 212855756 212855766 REL JASPAR yes 35147199
chr1 212855756 212855766 NFKB1 JASPAR yes 118455123
chr1 212855756 212855766 REL JASPAR yes 118455124
chr1 212855756 212855767 NFKB1 JASPAR yes 35147200
chr1 212855756 212855767 NFKB1 JASPAR yes 118455125
chr1 212855756 212855771 HSF1 JASPAR yes 35147201
chr1 212855756 212855771 HSF1 JASPAR yes 118455126
chr1 212855768 212855784 SRF JASPAR yes 35147202
chr1 212855768 212855784 SRF JASPAR yes 118455127
chr1 212855801 212855812 FOXA1 JASPAR yes 35147203
chr1 212855801 212855812 FOXA1 JASPAR yes 118455128
chr1 212855801 212855816 FOXA1 JASPAR yes 35147204
chr1 212855801 212855816 FOXA1 JASPAR yes 118455129
chr1 212855802 212855813 FOXC1 JASPAR yes 35147205
chr1 212855802 212855813 FOXC1 JASPAR yes 118455130
chr1 212855802 212855814 FOXC2 JASPAR yes 35147206
chr1 212855802 212855814 FOXC2 JASPAR yes 118455131
chr1 212855805 212855814 SRY JASPAR yes 35147207
chr1 212855805 212855814 SRY JASPAR yes 118455132
chr1 212855807 212855816 SOX9 JASPAR yes 35147208
chr1 212855807 212855816 SOX9 JASPAR yes 118455133
chr1 212855814 212855829 PRDM1 JASPAR yes 35147209
chr1 212855814 212855829 PRDM1 JASPAR yes 118455134
chr1 212855817 212855835 IRF2 JASPAR yes 35147210
chr1 212855817 212855835 IRF2 JASPAR yes 118455135
chr1 212855818 212855839 IRF1 JASPAR yes 35147211
chr1 212855818 212855839 IRF1 JASPAR yes 118455136
chr1 212855829 212855844 TFAP2A JASPAR yes 35147212
chr1 212855829 212855844 TFAP2C JASPAR yes 35147213
chr1 212855829 212855844 TFAP2A JASPAR yes 118455137
chr1 212855829 212855844 TFAP2C JASPAR yes 118455138
chr1 212855831 212855846 TFAP2A JASPAR yes 35147214
chr1 212855831 212855846 TFAP2C JASPAR yes 35147215
chr1 212855831 212855846 TFAP2A JASPAR yes 118455139
chr1 212855831 212855846 TFAP2C JASPAR yes 118455140
chr1 212855832 212855844 TFAP2A JASPAR yes 35147216
chr1 212855832 212855844 TFAP2B JASPAR yes 35147217
chr1 212855832 212855844 TFAP2C JASPAR yes 35147218
chr1 212855832 212855844 TFAP2A JASPAR yes 118455141
chr1 212855832 212855844 TFAP2B JASPAR yes 118455142
chr1 212855832 212855844 TFAP2C JASPAR yes 118455143
chr1 212855837 212855852 RUNX2 JASPAR yes 35147219
chr1 212855837 212855852 RUNX2 JASPAR yes 118455144
chr1 212855842 212855851 RUNX2 JASPAR yes 35147220
chr1 212855842 212855851 RUNX2 JASPAR yes 118455145
chr1 212855890 212855894 YY1 TRANSFAC yes 35147221
chr1 212855890 212855894 YY1 TRANSFAC yes 118455146
SNP sites on vista5026[chr1:212855580-212855934]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212855666 rs115241672 C T
GATA2
925158
chr1 212855740 rs191495609 G A
ZNF410
925159
chr1 212855865 rs61378850 G C no 925160
chr1 212855866 rs57052723 T A no 925161
chr1 212855923 rs17019567 A G no 925162
Genes possibly regulated by vista5026[chr1:212855580-212855934]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 42209
chr1 212859760 212873327 - BATF3 ENSG00000123685.4 212873327 0.87 1.0 1830 82607
Expression level of Genes
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miRNAs possibly regulated by vista5026[chr1:212855580-212855934]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results