EnhancerDB
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  3. vista5027[chr1:212856011-212856573]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5027[chr1:212856011-212856573]
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Tissue distribution of vista5027
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Transcription factor that possibly regulate vista5027[chr1:212856011-212856573]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212856573 212856975 RUNX3 UCSC Txn Factor no Conserved 107869324
chr1 212856035 212856050 SOX21 JASPAR yes 35147227
chr1 212856035 212856050 SOX21 JASPAR yes 118455147
chr1 212856035 212856051 SOX4 JASPAR yes 35147228
chr1 212856035 212856051 SOX4 JASPAR yes 118455148
chr1 212856068 212856074 ESR1 TRANSFAC yes 35147229
chr1 212856068 212856074 ESR1 TRANSFAC yes 118455149
chr1 212856070 212856074 ESR1 TRANSFAC yes 35147230
chr1 212856070 212856074 ESR1 TRANSFAC yes 118455150
chr1 212856085 212856106 REST JASPAR yes 35147231
chr1 212856085 212856106 REST JASPAR yes 118455151
chr1 212856111 212856119 TBX5 JASPAR yes 35147232
chr1 212856111 212856119 TBX5 JASPAR yes 118455152
chr1 212856117 212856121 NFE TRANSFAC yes 35147233
chr1 212856117 212856121 NFE TRANSFAC yes 118455153
chr1 212856117 212856122 GATA1 TRANSFAC yes 35147234
chr1 212856117 212856122 GATA1 TRANSFAC yes 118455154
chr1 212856117 212856123 GATA3 JASPAR yes 35147235
chr1 212856117 212856123 GATA3 JASPAR yes 118455155
chr1 212856124 212856130 SOX10 JASPAR yes 35147236
chr1 212856124 212856130 SOX10 JASPAR yes 118455156
chr1 212856143 212856148 SP1 TRANSFAC yes 35147237
chr1 212856143 212856148 SP1 TRANSFAC yes 118455157
chr1 212856165 212856169 H4TF2 TRANSFAC yes 35147238
chr1 212856165 212856169 H4TF2 TRANSFAC yes 118455158
chr1 212856169 212856173 YY1 TRANSFAC yes 35147239
chr1 212856169 212856173 YY1 TRANSFAC yes 118455159
chr1 212856180 212856184 LFA1 TRANSFAC yes 35147240
chr1 212856180 212856184 LFA1 TRANSFAC yes 118455160
chr1 212856235 212856254 PAX5 JASPAR yes 35147241
chr1 212856235 212856254 PAX5 JASPAR yes 118455161
chr1 212856246 212856266 RREB1 JASPAR yes 35147242
chr1 212856246 212856266 RREB1 JASPAR yes 118455162
chr1 212856249 212856261 INSM1 JASPAR yes 35147243
chr1 212856249 212856261 INSM1 JASPAR yes 118455163
chr1 212856256 212856267 RUNX1 JASPAR yes 35147244
chr1 212856256 212856267 RUNX1 JASPAR yes 118455164
chr1 212856274 212856278 YY1 TRANSFAC yes 35147245
chr1 212856274 212856278 YY1 TRANSFAC yes 118455165
chr1 212856277 212856287 GCM2 JASPAR yes 35147246
chr1 212856277 212856287 GCM2 JASPAR yes 118455166
chr1 212856278 212856288 ZNF740 JASPAR yes 35147247
chr1 212856278 212856288 ZNF740 JASPAR yes 118455167
chr1 212856280 212856294 PLAG1 JASPAR yes 35147248
chr1 212856280 212856294 PLAG1 JASPAR yes 118455168
chr1 212856281 212856292 TBX20 JASPAR yes 35147249
chr1 212856281 212856292 TBX20 JASPAR yes 118455169
chr1 212856282 212856290 MGA JASPAR yes 35147250
chr1 212856282 212856290 TBX15 JASPAR yes 35147251
chr1 212856282 212856290 TBX1 JASPAR yes 35147252
chr1 212856282 212856290 TBX4 JASPAR yes 35147253
chr1 212856282 212856290 TBX5 JASPAR yes 35147254
chr1 212856282 212856290 MGA JASPAR yes 118455170
chr1 212856282 212856290 TBX15 JASPAR yes 118455171
chr1 212856282 212856290 TBX1 JASPAR yes 118455172
chr1 212856282 212856290 TBX4 JASPAR yes 118455173
chr1 212856282 212856290 TBX5 JASPAR yes 118455174
chr1 212856285 212856305 PPARG JASPAR yes 35147255
chr1 212856285 212856305 PPARG JASPAR yes 118455175
chr1 212856289 212856302 NFKB2 JASPAR yes 35147256
chr1 212856289 212856302 NFKB2 JASPAR yes 118455176
chr1 212856290 212856300 NFKB1 JASPAR yes 35147257
chr1 212856290 212856300 REL JASPAR yes 35147258
chr1 212856290 212856300 NFKB1 JASPAR yes 118455177
chr1 212856290 212856300 REL JASPAR yes 118455178
chr1 212856290 212856301 NFKB1 JASPAR yes 35147259
chr1 212856290 212856301 NFKB1 JASPAR yes 118455179
chr1 212856291 212856301 NFKB1 JASPAR yes 35147260
chr1 212856291 212856301 REL JASPAR yes 35147261
chr1 212856291 212856301 NFKB1 JASPAR yes 118455180
chr1 212856291 212856301 REL JASPAR yes 118455181
chr1 212856291 212856302 NFKB1 JASPAR yes 35147262
chr1 212856291 212856302 NFKB1 JASPAR yes 118455182
chr1 212856305 212856319 ZIC1 JASPAR yes 35147263
chr1 212856305 212856319 ZIC1 JASPAR yes 118455183
chr1 212856315 212856326 FOXH1 JASPAR yes 35147264
chr1 212856315 212856326 FOXH1 JASPAR yes 118455184
chr1 212856316 212856322 ZNF354C JASPAR yes 35147265
chr1 212856316 212856322 ZNF354C JASPAR yes 118455185
chr1 212856334 212856345 EBF1 JASPAR yes 35147266
chr1 212856334 212856345 EBF1 JASPAR yes 118455186
chr1 212856372 212856393 ZNF263 JASPAR yes 35147267
chr1 212856372 212856393 ZNF263 JASPAR yes 118455187
chr1 212856373 212856379 MZF1 JASPAR yes 35147268
chr1 212856373 212856379 MZF1 JASPAR yes 118455188
chr1 212856373 212856394 ZNF263 JASPAR yes 35147269
chr1 212856373 212856394 ZNF263 JASPAR yes 118455189
chr1 212856377 212856388 E2F6 JASPAR yes 35147270
chr1 212856377 212856388 E2F6 JASPAR yes 118455190
chr1 212856377 212856398 ZNF263 JASPAR yes 35147271
chr1 212856377 212856398 ZNF263 JASPAR yes 118455191
chr1 212856384 212856398 SPI1 JASPAR yes 35147272
chr1 212856384 212856398 SPIC JASPAR yes 35147273
chr1 212856384 212856398 SPI1 JASPAR yes 118455192
chr1 212856384 212856398 SPIC JASPAR yes 118455193
chr1 212856384 212856405 ZNF263 JASPAR yes 35147274
chr1 212856384 212856405 ZNF263 JASPAR yes 118455194
chr1 212856388 212856409 ZNF263 JASPAR yes 35147275
chr1 212856388 212856409 ZNF263 JASPAR yes 118455195
chr1 212856392 212856399 NFATC2 JASPAR yes 35147276
chr1 212856392 212856399 NFATC2 JASPAR yes 118455196
chr1 212856392 212856413 ZNF263 JASPAR yes 35147277
chr1 212856392 212856413 ZNF263 JASPAR yes 118455197
chr1 212856395 212856416 ZNF263 JASPAR yes 35147278
chr1 212856395 212856416 ZNF263 JASPAR yes 118455198
chr1 212856400 212856421 ZNF263 JASPAR yes 35147279
chr1 212856400 212856421 ZNF263 JASPAR yes 118455199
chr1 212856401 212856422 ZNF263 JASPAR yes 35147280
chr1 212856401 212856422 ZNF263 JASPAR yes 118455200
chr1 212856404 212856425 ZNF263 JASPAR yes 35147281
chr1 212856404 212856425 ZNF263 JASPAR yes 118455201
chr1 212856406 212856411 ETS2 TRANSFAC yes 35147282
chr1 212856406 212856411 ETS2 TRANSFAC yes 118455202
chr1 212856407 212856428 ZNF263 JASPAR yes 35147283
chr1 212856407 212856428 ZNF263 JASPAR yes 118455203
chr1 212856409 212856430 ZNF263 JASPAR yes 35147284
chr1 212856409 212856430 ZNF263 JASPAR yes 118455204
chr1 212856410 212856431 ZNF263 JASPAR yes 35147285
chr1 212856410 212856431 ZNF263 JASPAR yes 118455205
chr1 212856412 212856425 ELF1 JASPAR yes 35147286
chr1 212856412 212856425 ELF1 JASPAR yes 118455206
chr1 212856413 212856434 ZNF263 JASPAR yes 35147287
chr1 212856413 212856434 ZNF263 JASPAR yes 118455207
chr1 212856417 212856438 ZNF263 JASPAR yes 35147288
chr1 212856417 212856438 ZNF263 JASPAR yes 118455208
chr1 212856423 212856444 IRF1 JASPAR yes 35147289
chr1 212856423 212856444 IRF1 JASPAR yes 118455209
chr1 212856429 212856450 IRF1 JASPAR yes 35147290
chr1 212856429 212856450 IRF1 JASPAR yes 118455210
chr1 212856431 212856446 PRDM1 JASPAR yes 35147291
chr1 212856431 212856446 STAT2 JASPAR yes 35147292
chr1 212856431 212856446 PRDM1 JASPAR yes 118455211
chr1 212856431 212856446 STAT2 JASPAR yes 118455212
chr1 212856454 212856475 ZNF263 JASPAR yes 35147293
chr1 212856454 212856475 ZNF263 JASPAR yes 118455213
chr1 212856498 212856509 ELK4 JASPAR yes 35147294
chr1 212856498 212856509 ELK4 JASPAR yes 118455214
chr1 212856499 212856510 ELF5 JASPAR yes 35147295
chr1 212856499 212856510 ELF5 JASPAR yes 118455215
chr1 212856499 212856511 EHF JASPAR yes 35147296
chr1 212856499 212856511 ELF1 JASPAR yes 35147297
chr1 212856499 212856511 ELF4 JASPAR yes 35147298
chr1 212856499 212856511 EHF JASPAR yes 118455216
chr1 212856499 212856511 ELF1 JASPAR yes 118455217
chr1 212856499 212856511 ELF4 JASPAR yes 118455218
chr1 212856499 212856512 ELF1 JASPAR yes 35147299
chr1 212856499 212856512 ELF1 JASPAR yes 118455219
chr1 212856500 212856507 SPI1 JASPAR yes 35147300
chr1 212856500 212856507 SPI1 JASPAR yes 118455220
chr1 212856500 212856508 EHF JASPAR yes 35147301
chr1 212856500 212856508 FEV JASPAR yes 35147302
chr1 212856500 212856508 EHF JASPAR yes 118455221
chr1 212856500 212856508 FEV JASPAR yes 118455222
chr1 212856509 212856520 EBF1 JASPAR yes 35147303
chr1 212856509 212856520 EBF1 JASPAR yes 118455223
chr1 212856516 212856522 MAZ TRANSFAC yes 35147304
chr1 212856516 212856522 MAZ TRANSFAC yes 118455224
chr1 212856516 212856527 E2F6 JASPAR yes 35147305
chr1 212856516 212856527 E2F6 JASPAR yes 118455225
chr1 212856520 212856525 ETS2 TRANSFAC yes 35147306
chr1 212856520 212856525 ETS2 TRANSFAC yes 118455226
chr1 212856524 212856532 TBX5 JASPAR yes 35147307
chr1 212856524 212856532 TBX5 JASPAR yes 118455227
chr1 212856528 212856548 ESR1 JASPAR yes 35147308
chr1 212856528 212856548 ESR1 JASPAR yes 118455228
chr1 212856543 212856548 SP1 TRANSFAC yes 35147309
chr1 212856543 212856548 SP1 TRANSFAC yes 118455229
chr1 212856547 212856568 IRF1 JASPAR yes 35147310
chr1 212856547 212856568 IRF1 JASPAR yes 118455230
chr1 212856548 212856569 IRF1 JASPAR yes 35147311
chr1 212856548 212856569 IRF1 JASPAR yes 118455231
chr1 212856549 212856564 PRDM1 JASPAR yes 35147312
chr1 212856549 212856564 PRDM1 JASPAR yes 118455232
chr1 212856549 212856570 IRF1 JASPAR yes 35147313
chr1 212856549 212856570 IRF1 JASPAR yes 118455233
chr1 212856551 212856566 FOXP1 JASPAR yes 35147314
chr1 212856551 212856566 FOXP1 JASPAR yes 118455234
chr1 212856552 212856567 FOXP1 JASPAR yes 35147315
chr1 212856552 212856567 FOXP1 JASPAR yes 118455235
chr1 212856553 212856568 FOXP1 JASPAR yes 35147316
chr1 212856553 212856568 FOXP1 JASPAR yes 118455236
chr1 212856554 212856569 FOXP1 JASPAR yes 35147317
chr1 212856554 212856569 FOXP1 JASPAR yes 118455237
chr1 212856554 212856575 IRF1 JASPAR yes 35147318
chr1 212856554 212856575 IRF1 JASPAR yes 118455238
chr1 212856555 212856570 FOXP1 JASPAR yes 35147319
chr1 212856555 212856570 FOXP1 JASPAR yes 118455239
chr1 212856556 212856571 FOXP1 JASPAR yes 35147320
chr1 212856556 212856571 FOXP1 JASPAR yes 118455240
chr1 212856557 212856572 FOXP1 JASPAR yes 35147321
chr1 212856557 212856572 FOXP1 JASPAR yes 118455241
chr1 212856558 212856573 FOXP1 JASPAR yes 35147322
chr1 212856558 212856573 FOXP1 JASPAR yes 118455242
chr1 212856559 212856574 FOXP1 JASPAR yes 35147323
chr1 212856559 212856574 FOXP1 JASPAR yes 118455243
chr1 212856560 212856575 FOXP1 JASPAR yes 35147324
chr1 212856560 212856575 FOXP1 JASPAR yes 118455244
SNP sites on vista5027[chr1:212856011-212856573]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212856030 rs535375710 G A no 925163
chr1 212856143 rs12034174 G A
SP1
925164
chr1 212856147 rs35027464 G A
SP1
925165
chr1 212856151 rs60334006 C T no 925166
chr1 212856237 rs144899410 C A
PAX5
925167
chr1 212856245 rs2492780 G A
PAX5
925168
chr1 212856255 rs554593367 C T
INSM1 RREB1
925169
chr1 212856434 rs10627958 G GCTT
IRF1 PRDM1 STAT2 ZNF263
925170
chr1 212856467 rs183555316 G A
ZNF263
925171
chr1 212856569 rs544020701 T C
FOXP1 IRF1
925172
Genes possibly regulated by vista5027[chr1:212856011-212856573]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 41778
chr1 212859760 212873327 - BATF3 ENSG00000123685.4 212873327 0.87 1.0 1830 83246
Expression level of Genes
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miRNAs possibly regulated by vista5027[chr1:212856011-212856573]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results