EnhancerDB
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  3. vista50272[chr5:174153587-174153702]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50272[chr5:174153587-174153702]
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Tissue distribution of vista50272
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Transcription factor that possibly regulate vista50272[chr5:174153587-174153702]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 174153587 174153602 FOXP1 JASPAR yes 70768548
chr5 174153588 174153603 FOXP1 JASPAR yes 70768549
chr5 174153588 174153609 IRF1 JASPAR yes 70768550
chr5 174153589 174153604 FOXP1 JASPAR yes 70768551
chr5 174153589 174153610 IRF1 JASPAR yes 70768552
chr5 174153590 174153605 FOXP1 JASPAR yes 70768553
chr5 174153590 174153611 IRF1 JASPAR yes 70768554
chr5 174153591 174153606 FOXP1 JASPAR yes 70768555
chr5 174153591 174153612 IRF1 JASPAR yes 70768556
chr5 174153592 174153607 FOXP1 JASPAR yes 70768557
chr5 174153593 174153608 FOXP1 JASPAR yes 70768558
chr5 174153594 174153609 FOXP1 JASPAR yes 70768559
chr5 174153594 174153615 IRF1 JASPAR yes 70768560
chr5 174153595 174153610 FOXP1 JASPAR yes 70768561
chr5 174153611 174153616 TFAP2A TRANSFAC yes 70768562
chr5 174153611 174153617 MZF1 JASPAR yes 70768563
chr5 174153616 174153626 BARHL2 JASPAR yes 70768564
chr5 174153618 174153622 YY1 TRANSFAC yes 70768565
chr5 174153619 174153629 HOXC10 JASPAR yes 70768566
chr5 174153619 174153629 HOXD11 JASPAR yes 70768567
chr5 174153619 174153630 HOXC11 JASPAR yes 70768568
chr5 174153619 174153630 HOXC12 JASPAR yes 70768569
chr5 174153634 174153644 FIGLA JASPAR yes 70768570
chr5 174153637 174153650 SMAD2 JASPAR yes 70768571
chr5 174153641 174153654 SMAD2 JASPAR yes 70768572
SNP sites on vista50272[chr5:174153587-174153702]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 174153613 rs185697899 G T
IRF1 MZF1 TFAP2A
8720094
Genes possibly regulated by vista50272[chr5:174153587-174153702]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 174151536 174157896 + MSX2 ENSG00000120149.7 174151536 0.94 0.99 5997 97949
Expression level of Genes
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miRNAs possibly regulated by vista50272[chr5:174153587-174153702]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results