EnhancerDB
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  3. vista50282[chr5:175026340-175026569]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50282[chr5:175026340-175026569]
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Tissue distribution of vista50282
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Transcription factor that possibly regulate vista50282[chr5:175026340-175026569]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 175026338 175026348 ETV3 JASPAR yes 68018484
chr5 175026338 175026348 ETV3 JASPAR yes 70768838
chr5 175026342 175026352 TBX21 JASPAR yes 68018485
chr5 175026342 175026352 TBX21 JASPAR yes 70768839
chr5 175026342 175026353 TBX20 JASPAR yes 68018486
chr5 175026342 175026353 TBX20 JASPAR yes 70768840
chr5 175026342 175026355 EOMES JASPAR yes 68018487
chr5 175026342 175026355 EOMES JASPAR yes 70768841
chr5 175026343 175026353 TBR1 JASPAR yes 68018488
chr5 175026343 175026353 TBR1 JASPAR yes 70768842
chr5 175026358 175026361 MYB TRANSFAC yes 68018489
chr5 175026358 175026361 MYB TRANSFAC yes 70768843
chr5 175026387 175026403 NFYA JASPAR yes 68018490
chr5 175026387 175026403 NFYA JASPAR yes 70768844
chr5 175026392 175026396 H1TF2 TRANSFAC yes 68018491
chr5 175026392 175026396 NFE TRANSFAC yes 68018492
chr5 175026392 175026396 SRF TRANSFAC yes 68018493
chr5 175026392 175026396 H1TF2 TRANSFAC yes 70768845
chr5 175026392 175026396 NFE TRANSFAC yes 70768846
chr5 175026392 175026396 SRF TRANSFAC yes 70768847
chr5 175026412 175026415 MYB TRANSFAC yes 68018494
chr5 175026412 175026415 MYB TRANSFAC yes 70768848
chr5 175026428 175026438 MYF6 JASPAR yes 68018495
chr5 175026428 175026438 MYF6 JASPAR yes 70768849
chr5 175026439 175026453 MTF1 JASPAR yes 68018496
chr5 175026439 175026453 MTF1 JASPAR yes 70768850
chr5 175026443 175026461 SRF JASPAR yes 68018497
chr5 175026443 175026461 SRF JASPAR yes 70768851
chr5 175026461 175026466 SP1 TRANSFAC yes 68018498
chr5 175026461 175026466 SP1 TRANSFAC yes 70768852
chr5 175026495 175026516 IRF1 JASPAR yes 68018499
chr5 175026495 175026516 IRF1 JASPAR yes 70768853
chr5 175026497 175026512 STAT2 JASPAR yes 68018500
chr5 175026497 175026512 STAT2 JASPAR yes 70768854
chr5 175026498 175026512 SPI1 JASPAR yes 68018501
chr5 175026498 175026512 SPI1 JASPAR yes 70768855
chr5 175026501 175026516 FOXP1 JASPAR yes 68018502
chr5 175026501 175026516 FOXP1 JASPAR yes 70768856
chr5 175026502 175026513 FOXP2 JASPAR yes 68018503
chr5 175026502 175026513 FOXP2 JASPAR yes 70768857
chr5 175026504 175026512 FOXO3 JASPAR yes 68018504
chr5 175026504 175026512 FOXO3 JASPAR yes 70768858
chr5 175026507 175026513 ETS1 JASPAR yes 68018505
chr5 175026507 175026513 ETS1 JASPAR yes 70768859
chr5 175026515 175026536 IRF1 JASPAR yes 68018506
chr5 175026515 175026536 IRF1 JASPAR yes 70768860
chr5 175026517 175026532 PRDM1 JASPAR yes 68018507
chr5 175026517 175026532 STAT2 JASPAR yes 68018508
chr5 175026517 175026532 PRDM1 JASPAR yes 70768861
chr5 175026517 175026532 STAT2 JASPAR yes 70768862
chr5 175026518 175026522 YY1 TRANSFAC yes 68018509
chr5 175026518 175026522 YY1 TRANSFAC yes 70768863
chr5 175026518 175026532 STAT1 JASPAR yes 68018510
chr5 175026518 175026532 STAT1 JASPAR yes 70768864
chr5 175026522 175026527 ETS2 TRANSFAC yes 68018511
chr5 175026522 175026527 ETS2 TRANSFAC yes 70768865
chr5 175026522 175026537 PRDM1 JASPAR yes 68018512
chr5 175026522 175026537 PRDM1 JASPAR yes 70768866
chr5 175026531 175026535 NFE TRANSFAC yes 68018513
chr5 175026531 175026535 NFE TRANSFAC yes 70768867
chr5 175026536 175026540 TEAD2 TRANSFAC yes 68018514
chr5 175026536 175026540 TEAD2 TRANSFAC yes 70768868
chr5 175026536 175026541 TBP TRANSFAC yes 68018515
chr5 175026536 175026541 TBP TRANSFAC yes 70768869
chr5 175026536 175026542 TMF TRANSFAC yes 68018516
chr5 175026536 175026542 TMF TRANSFAC yes 70768870
SNP sites on vista50282[chr5:175026340-175026569]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 175026508 rs115582164 T C
ETS1 FOXO3 FOXP1 FOXP2 IRF1 SPI1 STAT2
8724547
chr5 175026556 rs77610878 C T no 8724548
Genes possibly regulated by vista50282[chr5:175026340-175026569]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 175085033 175113245 + HRH2 ENSG00000113749.5 175085033 0.83 0.99 6000 41536
Expression level of Genes
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miRNAs possibly regulated by vista50282[chr5:175026340-175026569]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results