EnhancerDB
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  3. vista50285[chr5:175111905-175112078]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50285[chr5:175111905-175112078]
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Tissue distribution of vista50285
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Transcription factor that possibly regulate vista50285[chr5:175111905-175112078]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 175111906 175111921 PRDM1 JASPAR yes 70768979
chr5 175111907 175111922 LEF1 JASPAR yes 70768980
chr5 175111925 175111940 PRDM1 JASPAR yes 70768981
chr5 175111931 175111945 STAT1 JASPAR yes 70768982
chr5 175111931 175111946 STAT2 JASPAR yes 70768983
chr5 175111931 175111949 IRF2 JASPAR yes 70768984
chr5 175111939 175111942 MYB TRANSFAC yes 70768985
chr5 175112027 175112041 JUN JASPAR yes 70768986
chr5 175112029 175112040 BATF JASPAR yes 70768987
chr5 175112030 175112041 JUNB JASPAR yes 70768988
chr5 175112031 175112042 FOS JASPAR yes 70768989
chr5 175112031 175112042 FOSL1 JASPAR yes 70768990
chr5 175112031 175112042 JUND JASPAR yes 70768991
chr5 175112031 175112042 NFE2 JASPAR yes 70768992
chr5 175112032 175112041 JDP2 JASPAR yes 70768993
chr5 175112032 175112043 FOSL2 JASPAR yes 70768994
chr5 175112032 175112043 JUNB JASPAR yes 70768995
chr5 175112041 175112062 ZNF263 JASPAR yes 70768996
chr5 175112044 175112051 SPIB JASPAR yes 70768997
chr5 175112052 175112073 IRF1 JASPAR yes 70768998
chr5 175112053 175112060 SPIB JASPAR yes 70768999
chr5 175112055 175112069 IRF7 JASPAR yes 70769000
SNP sites on vista50285[chr5:175111905-175112078]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 175111973 rs138425636 C T no 8725079
chr5 175112026 rs550545040 TG T no 8725080
chr5 175112070 rs531552218 A G
IRF1
8725081
Genes possibly regulated by vista50285[chr5:175111905-175112078]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 175085033 175113245 + HRH2 ENSG00000113749.5 175085033 0.83 0.99 6000 73128
Expression level of Genes
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miRNAs possibly regulated by vista50285[chr5:175111905-175112078]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results