EnhancerDB
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  3. vista5029[chr1:212864843-212865470]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5029[chr1:212864843-212865470]
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Tissue distribution of vista5029
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Transcription factor that possibly regulate vista5029[chr1:212864843-212865470]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 212864865 212864880 STAT1 JASPAR yes 118455271
chr1 212864867 212864878 STAT1 JASPAR yes 118455272
chr1 212864867 212864878 STAT3 JASPAR yes 118455273
chr1 212864932 212864942 MAX JASPAR yes 118455274
chr1 212864932 212864943 USF1 JASPAR yes 118455275
chr1 212864932 212864943 USF2 JASPAR yes 118455276
chr1 212864979 212864995 RFX3 JASPAR yes 118455277
chr1 212864979 212864995 RFX4 JASPAR yes 118455278
chr1 212864980 212864999 RFX2 JASPAR yes 118455279
chr1 212864982 212864997 RFX5 JASPAR yes 118455280
chr1 212864993 212865003 TEAD1 JASPAR yes 118455281
chr1 212864993 212865003 TEAD4 JASPAR yes 118455282
chr1 212864993 212865010 ZNF410 JASPAR yes 118455283
chr1 212864995 212865010 RUNX2 JASPAR yes 118455284
chr1 212864996 212865007 RUNX1 JASPAR yes 118455285
chr1 212865000 212865015 SOX21 JASPAR yes 118455286
chr1 212865009 212865020 CEBPA JASPAR yes 118455287
chr1 212865020 212865024 YY1 TRANSFAC yes 118455288
chr1 212865037 212865041 YY1 TRANSFAC yes 118455289
chr1 212865054 212865060 YY1 JASPAR yes 118455290
chr1 212865064 212865079 PRDM1 JASPAR yes 118455291
chr1 212865069 212865074 ETS2 TRANSFAC yes 118455292
chr1 212865075 212865086 JUNB JASPAR yes 118455293
chr1 212865077 212865084 JUN TRANSFAC yes 118455294
chr1 212865078 212865089 BATF JASPAR yes 118455295
chr1 212865096 212865109 SMAD2 JASPAR yes 118455296
chr1 212865099 212865110 TBX20 JASPAR yes 118455297
chr1 212865119 212865139 ESR1 JASPAR yes 118455298
chr1 212865123 212865141 ESR2 JASPAR yes 118455299
chr1 212865124 212865139 ESR2 JASPAR yes 118455300
chr1 212865132 212865146 RORA JASPAR yes 118455301
chr1 212865143 212865154 FOSL2 JASPAR yes 118455302
chr1 212865170 212865178 SP1 TRANSFAC yes 118455303
chr1 212865203 212865207 YY1 TRANSFAC yes 118455304
chr1 212865214 212865229 HNF4A JASPAR yes 118455305
chr1 212865215 212865230 HNF4G JASPAR yes 118455306
chr1 212865219 212865229 NFIA JASPAR yes 118455307
chr1 212865220 212865229 NFIX JASPAR yes 118455308
chr1 212865221 212865227 NFIC JASPAR yes 118455309
chr1 212865261 212865275 EBF1 JASPAR yes 118455310
chr1 212865262 212865268 MZF1 JASPAR yes 118455311
chr1 212865262 212865277 ZIC3 JASPAR yes 118455312
chr1 212865262 212865277 ZIC4 JASPAR yes 118455313
chr1 212865263 212865277 ZIC1 JASPAR yes 118455314
chr1 212865271 212865281 TBX21 JASPAR yes 118455315
chr1 212865271 212865282 TBX20 JASPAR yes 118455316
chr1 212865271 212865282 TBX2 JASPAR yes 118455317
chr1 212865271 212865284 EOMES JASPAR yes 118455318
chr1 212865272 212865280 MGA JASPAR yes 118455319
chr1 212865272 212865280 TBX15 JASPAR yes 118455320
chr1 212865272 212865280 TBX1 JASPAR yes 118455321
chr1 212865272 212865280 TBX4 JASPAR yes 118455322
chr1 212865272 212865280 TBX5 JASPAR yes 118455323
chr1 212865272 212865282 TBR1 JASPAR yes 118455324
chr1 212865356 212865361 MYC TRANSFAC yes 118455325
chr1 212865369 212865378 THAP1 JASPAR yes 118455326
chr1 212865380 212865395 STAT1 JASPAR yes 118455327
chr1 212865382 212865391 THAP1 JASPAR yes 118455328
chr1 212865396 212865416 PPARG JASPAR yes 118455329
chr1 212865404 212865417 NFKB1 JASPAR yes 118455330
chr1 212865405 212865416 NFKB1 JASPAR yes 118455331
chr1 212865406 212865416 RELA JASPAR yes 118455332
chr1 212865412 212865420 SP1 TRANSFAC yes 118455333
chr1 212865432 212865439 E2F1 TRANSFAC yes 118455334
chr1 212865446 212865467 ZNF263 JASPAR yes 118455335
chr1 212865448 212865469 ZNF263 JASPAR yes 118455336
chr1 212865459 212865469 MZF1 JASPAR yes 118455337
chr1 212865462 212865468 SP1 TRANSFAC yes 118455338
SNP sites on vista5029[chr1:212864843-212865470]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 212864871 rs60292092 C T
STAT1 STAT3
925265
chr1 212864904 rs74141111 G T no 925266
chr1 212864948 rs59184028 G T no 925267
chr1 212864952 rs116374906 T A no 925268
chr1 212864974 rs3754477 A G no 925269
chr1 212864992 rs12068304 A G
RFX2 RFX3 RFX4 RFX5
925270
chr1 212865045 rs139330952 G C no 925271
chr1 212865233 rs113906256 C T no 925272
chr1 212865270 rs376737808 G A
EBF1 ZIC1 ZIC3 ZIC4
925273
chr1 212865337 rs3754478 C T no 925274
chr1 212865377 rs144772876 C T
THAP1
925275
chr1 212865398 rs12070621 T C
PPARG
925276
Genes possibly regulated by vista5029[chr1:212864843-212865470]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 212797789 212800120 + FAM71A ENSG00000162771.6 212797789 0.96 1.0 1829 32946
chr1 212859760 212873327 - BATF3 ENSG00000123685.4 212873327 0.87 1.0 1830 92143
chr1 212899495 212965124 - NSL1 ENSG00000117697.10 212965124 0.78 0.97 1831 346
chr1 212965170 212989968 + TATDN3 ENSG00000203705.6 212965170 0.7 0.99 1832 300
Expression level of Genes
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miRNAs possibly regulated by vista5029[chr1:212864843-212865470]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results