EnhancerDB
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  3. vista50294[chr5:175960481-175960718]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50294[chr5:175960481-175960718]
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Tissue distribution of vista50294
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Transcription factor that possibly regulate vista50294[chr5:175960481-175960718]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 175960512 175960527 TFAP2A JASPAR yes 68055649
chr5 175960512 175960527 TFAP2C JASPAR yes 68055650
chr5 175960512 175960527 TFAP2A JASPAR yes 70769286
chr5 175960512 175960527 TFAP2C JASPAR yes 70769287
chr5 175960515 175960526 TFAP2A JASPAR yes 68055651
chr5 175960515 175960526 TFAP2B JASPAR yes 68055652
chr5 175960515 175960526 TFAP2C JASPAR yes 68055653
chr5 175960515 175960526 TFAP2A JASPAR yes 70769288
chr5 175960515 175960526 TFAP2B JASPAR yes 70769289
chr5 175960515 175960526 TFAP2C JASPAR yes 70769290
chr5 175960516 175960525 TFAP2A JASPAR yes 68055654
chr5 175960516 175960525 TFAP2A JASPAR yes 70769291
chr5 175960519 175960535 ZNF143 JASPAR yes 68055655
chr5 175960519 175960535 ZNF143 JASPAR yes 70769292
chr5 175960524 175960538 GLIS2 JASPAR yes 68055656
chr5 175960524 175960538 GLIS3 JASPAR yes 68055657
chr5 175960524 175960538 GLIS2 JASPAR yes 70769293
chr5 175960524 175960538 GLIS3 JASPAR yes 70769294
chr5 175960537 175960550 ELF1 JASPAR yes 68055658
chr5 175960537 175960550 ELF1 JASPAR yes 70769295
chr5 175960541 175960546 ETS2 TRANSFAC yes 68055659
chr5 175960541 175960546 ETS2 TRANSFAC yes 70769296
chr5 175960541 175960549 FEV JASPAR yes 68055660
chr5 175960541 175960549 FEV JASPAR yes 70769297
chr5 175960542 175960549 SPI1 JASPAR yes 68055661
chr5 175960542 175960549 SPI1 JASPAR yes 70769298
chr5 175960554 175960559 TFAP2A TRANSFAC yes 68055662
chr5 175960554 175960559 TFAP2A TRANSFAC yes 70769299
chr5 175960554 175960560 MZF1 JASPAR yes 68055663
chr5 175960554 175960560 MZF1 JASPAR yes 70769300
chr5 175960571 175960585 TLX1 JASPAR yes 68055664
chr5 175960571 175960585 TLX1 JASPAR yes 70769301
chr5 175960572 175960586 TLX1 JASPAR yes 68055665
chr5 175960572 175960586 TLX1 JASPAR yes 70769302
chr5 175960583 175960598 HNF4A JASPAR yes 68055666
chr5 175960583 175960598 HNF4A JASPAR yes 70769303
chr5 175960584 175960599 HNF4G JASPAR yes 68055667
chr5 175960584 175960599 HNF4G JASPAR yes 70769304
chr5 175960597 175960602 SP1 TRANSFAC yes 68055668
chr5 175960597 175960602 SP1 TRANSFAC yes 70769305
chr5 175960601 175960621 RREB1 JASPAR yes 68055669
chr5 175960601 175960621 RREB1 JASPAR yes 70769306
chr5 175960602 175960622 RREB1 JASPAR yes 68055670
chr5 175960602 175960622 RREB1 JASPAR yes 70769307
chr5 175960607 175960617 SP1 JASPAR yes 68055671
chr5 175960607 175960617 SP1 JASPAR yes 70769308
chr5 175960616 175960631 ZIC3 JASPAR yes 68055672
chr5 175960616 175960631 ZIC3 JASPAR yes 70769309
chr5 175960617 175960631 GLIS3 JASPAR yes 68055673
chr5 175960617 175960631 GLIS3 JASPAR yes 70769310
chr5 175960635 175960646 STAT3 JASPAR yes 68055674
chr5 175960635 175960646 STAT3 JASPAR yes 70769311
chr5 175960639 175960660 IRF1 JASPAR yes 68055675
chr5 175960639 175960660 ZNF263 JASPAR yes 68055676
chr5 175960639 175960660 IRF1 JASPAR yes 70769312
chr5 175960639 175960660 ZNF263 JASPAR yes 70769313
chr5 175960643 175960657 SPI1 JASPAR yes 68055677
chr5 175960643 175960657 SPIC JASPAR yes 68055678
chr5 175960643 175960657 SPI1 JASPAR yes 70769314
chr5 175960643 175960657 SPIC JASPAR yes 70769315
chr5 175960648 175960653 ETS2 TRANSFAC yes 68055679
chr5 175960648 175960653 ETS2 TRANSFAC yes 70769316
chr5 175960648 175960656 EHF JASPAR yes 68055680
chr5 175960648 175960656 EHF JASPAR yes 70769317
chr5 175960651 175960672 ZNF263 JASPAR yes 68055681
chr5 175960651 175960672 ZNF263 JASPAR yes 70769318
chr5 175960652 175960657 ETS2 TRANSFAC yes 68055682
chr5 175960652 175960657 ETS2 TRANSFAC yes 70769319
chr5 175960667 175960674 SPIB JASPAR yes 68055683
chr5 175960667 175960674 SPIB JASPAR yes 70769320
chr5 175960667 175960678 FLI1 JASPAR yes 68055684
chr5 175960667 175960678 FLI1 JASPAR yes 70769321
chr5 175960690 175960708 ESR2 JASPAR yes 68055685
chr5 175960690 175960708 ESR2 JASPAR yes 70769322
chr5 175960692 175960702 SP1 JASPAR yes 68055686
chr5 175960692 175960702 SP1 JASPAR yes 70769323
chr5 175960692 175960712 ESR1 JASPAR yes 68055687
chr5 175960692 175960712 ESR1 JASPAR yes 70769324
chr5 175960693 175960697 LFA1 TRANSFAC yes 68055688
chr5 175960693 175960697 LFA1 TRANSFAC yes 70769325
chr5 175960713 175960717 ESR1 TRANSFAC yes 68055689
chr5 175960713 175960717 ESR1 TRANSFAC yes 70769326
SNP sites on vista50294[chr5:175960481-175960718]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 175960503 rs189974264 G A no 8728436
chr5 175960545 rs9313738 G A
ELF1 ETS2 FEV SPI1
8728437
chr5 175960601 rs572662991 G C
RREB1 SP1
8728438
chr5 175960602 rs112324598 C G
RREB1 SP1
8728439
chr5 175960676 rs1366240 C G,T
FLI1
8728440
chr5 175960703 rs574507507 C T
ESR1 ESR2
8728441
Genes possibly regulated by vista50294[chr5:175960481-175960718]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 175874629 175937075 + FAF2 ENSG00000113194.8 175874629 0.66 1.0 6011 14148
chr5 175953698 175965026 - RNF44 ENSG00000146083.7 175965026 0.82 1.0 6012 95692
chr5 175969512 176022975 + CDHR2 ENSG00000074276.6 175969512 0.94 1.0 6013 91206
chr5 176022803 176037134 - GPRIN1 ENSG00000169258.6 176037134 0.81 0.99 6014 23584
chr5 176047085 176057530 - SNCB ENSG00000074317.6 176057530 0.86 0.97 6015 3188
chr5 176057683 176073642 + EIF4E1B ENSG00000175766.7 176057683 0.94 1.0 6016 3035
Expression level of Genes
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miRNAs possibly regulated by vista50294[chr5:175960481-175960718]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results