EnhancerDB
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  3. vista50295[chr5:175962179-175962700]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50295[chr5:175962179-175962700]
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Tissue distribution of vista50295
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Transcription factor that possibly regulate vista50295[chr5:175962179-175962700]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 175961891 175963086 POLR2A UCSC Txn Factor no Conserved 108537683
chr5 175962261 175962577 EBF1 UCSC Txn Factor no Conserved 108537684
chr5 175962171 175962184 NFKB1 JASPAR yes 68055856
chr5 175962171 175962184 NFKB2 JASPAR yes 68055857
chr5 175962171 175962184 NFKB1 JASPAR yes 70769327
chr5 175962171 175962184 NFKB2 JASPAR yes 70769328
chr5 175962172 175962183 NFKB1 JASPAR yes 68055858
chr5 175962172 175962183 NFKB1 JASPAR yes 70769329
chr5 175962176 175962186 MZF1 JASPAR yes 68055859
chr5 175962176 175962186 MZF1 JASPAR yes 70769330
chr5 175962179 175962185 SP1 TRANSFAC yes 68055860
chr5 175962179 175962185 SP1 TRANSFAC yes 70769331
chr5 175962195 175962200 GATA1 TRANSFAC yes 68055861
chr5 175962195 175962200 GATA1 TRANSFAC yes 70769332
chr5 175962223 175962227 H1TF2 TRANSFAC yes 68055862
chr5 175962223 175962227 NFE TRANSFAC yes 68055863
chr5 175962223 175962227 SRF TRANSFAC yes 68055864
chr5 175962223 175962227 H1TF2 TRANSFAC yes 70769333
chr5 175962223 175962227 NFE TRANSFAC yes 70769334
chr5 175962223 175962227 SRF TRANSFAC yes 70769335
chr5 175962227 175962230 MYB TRANSFAC yes 68055865
chr5 175962227 175962230 MYB TRANSFAC yes 70769336
chr5 175962241 175962252 STAT3 JASPAR yes 68055866
chr5 175962241 175962252 STAT3 JASPAR yes 70769337
chr5 175962241 175962253 E2F8 JASPAR yes 68055867
chr5 175962241 175962253 E2F8 JASPAR yes 70769338
chr5 175962253 175962268 TFAP2A JASPAR yes 68055868
chr5 175962253 175962268 TFAP2A JASPAR yes 70769339
chr5 175962256 175962275 RFX2 JASPAR yes 68055869
chr5 175962256 175962275 RFX2 JASPAR yes 70769340
chr5 175962303 175962313 TBX21 JASPAR yes 68055870
chr5 175962303 175962313 TBX21 JASPAR yes 70769341
chr5 175962303 175962314 TBX20 JASPAR yes 68055871
chr5 175962303 175962314 TBX2 JASPAR yes 68055872
chr5 175962303 175962314 TBX20 JASPAR yes 70769342
chr5 175962303 175962314 TBX2 JASPAR yes 70769343
chr5 175962303 175962316 EOMES JASPAR yes 68055873
chr5 175962303 175962316 EOMES JASPAR yes 70769344
chr5 175962304 175962312 MGA JASPAR yes 68055874
chr5 175962304 175962312 TBX15 JASPAR yes 68055875
chr5 175962304 175962312 TBX1 JASPAR yes 68055876
chr5 175962304 175962312 TBX4 JASPAR yes 68055877
chr5 175962304 175962312 TBX5 JASPAR yes 68055878
chr5 175962304 175962312 MGA JASPAR yes 70769345
chr5 175962304 175962312 TBX15 JASPAR yes 70769346
chr5 175962304 175962312 TBX1 JASPAR yes 70769347
chr5 175962304 175962312 TBX4 JASPAR yes 70769348
chr5 175962304 175962312 TBX5 JASPAR yes 70769349
chr5 175962304 175962314 TBR1 JASPAR yes 68055879
chr5 175962304 175962314 TBR1 JASPAR yes 70769350
chr5 175962317 175962321 YY1 TRANSFAC yes 68055880
chr5 175962317 175962321 YY1 TRANSFAC yes 70769351
chr5 175962339 175962353 RORA JASPAR yes 68055881
chr5 175962339 175962353 RORA JASPAR yes 70769352
chr5 175962340 175962350 RORA JASPAR yes 68055882
chr5 175962340 175962350 RORA JASPAR yes 70769353
chr5 175962341 175962352 YY2 JASPAR yes 68055883
chr5 175962341 175962352 YY2 JASPAR yes 70769354
chr5 175962347 175962351 YY1 TRANSFAC yes 68055884
chr5 175962347 175962351 YY1 TRANSFAC yes 70769355
chr5 175962379 175962390 ELK4 JASPAR yes 68055885
chr5 175962379 175962390 FLI1 JASPAR yes 68055886
chr5 175962379 175962390 ELK4 JASPAR yes 70769356
chr5 175962379 175962390 FLI1 JASPAR yes 70769357
chr5 175962379 175962392 ELF3 JASPAR yes 68055887
chr5 175962379 175962392 ELF3 JASPAR yes 70769358
chr5 175962380 175962390 ELK1 JASPAR yes 68055888
chr5 175962380 175962390 ELK3 JASPAR yes 68055889
chr5 175962380 175962390 ERF JASPAR yes 68055890
chr5 175962380 175962390 ERG JASPAR yes 68055891
chr5 175962380 175962390 ETS1 JASPAR yes 68055892
chr5 175962380 175962390 ETV1 JASPAR yes 68055893
chr5 175962380 175962390 ETV3 JASPAR yes 68055894
chr5 175962380 175962390 ETV4 JASPAR yes 68055895
chr5 175962380 175962390 ETV5 JASPAR yes 68055896
chr5 175962380 175962390 ETV6 JASPAR yes 68055897
chr5 175962380 175962390 FEV JASPAR yes 68055898
chr5 175962380 175962390 FLI1 JASPAR yes 68055899
chr5 175962380 175962390 GABPA JASPAR yes 68055900
chr5 175962380 175962390 ELK1 JASPAR yes 70769359
chr5 175962380 175962390 ELK3 JASPAR yes 70769360
chr5 175962380 175962390 ERF JASPAR yes 70769361
chr5 175962380 175962390 ERG JASPAR yes 70769362
chr5 175962380 175962390 ETS1 JASPAR yes 70769363
chr5 175962380 175962390 ETV1 JASPAR yes 70769364
chr5 175962380 175962390 ETV3 JASPAR yes 70769365
chr5 175962380 175962390 ETV4 JASPAR yes 70769366
chr5 175962380 175962390 ETV5 JASPAR yes 70769367
chr5 175962380 175962390 ETV6 JASPAR yes 70769368
chr5 175962380 175962390 FEV JASPAR yes 70769369
chr5 175962380 175962390 FLI1 JASPAR yes 70769370
chr5 175962380 175962390 GABPA JASPAR yes 70769371
chr5 175962380 175962391 ELF5 JASPAR yes 68055901
chr5 175962380 175962391 ELF5 JASPAR yes 70769372
chr5 175962380 175962392 EHF JASPAR yes 68055902
chr5 175962380 175962392 ELF1 JASPAR yes 68055903
chr5 175962380 175962392 ELF4 JASPAR yes 68055904
chr5 175962380 175962392 EHF JASPAR yes 70769373
chr5 175962380 175962392 ELF1 JASPAR yes 70769374
chr5 175962380 175962392 ELF4 JASPAR yes 70769375
chr5 175962380 175962393 ELF1 JASPAR yes 68055905
chr5 175962380 175962393 ELF1 JASPAR yes 70769376
chr5 175962381 175962389 FEV JASPAR yes 68055906
chr5 175962381 175962389 FEV JASPAR yes 70769377
chr5 175962381 175962390 ELK4 JASPAR yes 68055907
chr5 175962381 175962390 ELK4 JASPAR yes 70769378
chr5 175962382 175962388 ETS1 JASPAR yes 68055908
chr5 175962382 175962388 SPI1 JASPAR yes 68055909
chr5 175962382 175962388 ETS1 JASPAR yes 70769379
chr5 175962382 175962388 SPI1 JASPAR yes 70769380
chr5 175962382 175962392 ELK1 JASPAR yes 68055910
chr5 175962382 175962392 ELK1 JASPAR yes 70769381
chr5 175962388 175962392 LFA1 TRANSFAC yes 68055911
chr5 175962388 175962392 LFA1 TRANSFAC yes 70769382
chr5 175962413 175962426 NFKB2 JASPAR yes 68055912
chr5 175962413 175962426 NFKB2 JASPAR yes 70769383
chr5 175962414 175962424 REL JASPAR yes 68055913
chr5 175962414 175962424 REL JASPAR yes 70769384
chr5 175962422 175962434 NHLH1 JASPAR yes 68055914
chr5 175962422 175962434 NHLH1 JASPAR yes 70769385
chr5 175962423 175962433 TFAP4 JASPAR yes 68055915
chr5 175962423 175962433 TFAP4 JASPAR yes 70769386
chr5 175962437 175962443 ZNF354C JASPAR yes 68055916
chr5 175962437 175962443 ZNF354C JASPAR yes 70769387
chr5 175962484 175962502 ESR1 JASPAR yes 68055917
chr5 175962484 175962502 ESR1 JASPAR yes 70769388
chr5 175962524 175962537 ELF1 JASPAR yes 68055918
chr5 175962524 175962537 ELF1 JASPAR yes 70769389
chr5 175962527 175962538 FLI1 JASPAR yes 68055919
chr5 175962527 175962538 FLI1 JASPAR yes 70769390
chr5 175962528 175962533 ETS2 TRANSFAC yes 68055920
chr5 175962528 175962533 ETS2 TRANSFAC yes 70769391
chr5 175962528 175962536 FEV JASPAR yes 68055921
chr5 175962528 175962536 FEV JASPAR yes 70769392
chr5 175962529 175962536 SPI1 JASPAR yes 68055922
chr5 175962529 175962536 SPI1 JASPAR yes 70769393
chr5 175962545 175962560 RUNX2 JASPAR yes 68055923
chr5 175962545 175962560 RUNX2 JASPAR yes 70769394
chr5 175962574 175962578 H4TF2 TRANSFAC yes 68055924
chr5 175962574 175962578 H4TF2 TRANSFAC yes 70769395
chr5 175962599 175962614 TFAP2A JASPAR yes 68055925
chr5 175962599 175962614 TFAP2A JASPAR yes 70769396
chr5 175962601 175962613 INSM1 JASPAR yes 68055926
chr5 175962601 175962613 INSM1 JASPAR yes 70769397
chr5 175962602 175962614 TFAP2A JASPAR yes 68055927
chr5 175962602 175962614 TFAP2B JASPAR yes 68055928
chr5 175962602 175962614 TFAP2C JASPAR yes 68055929
chr5 175962602 175962614 TFAP2A JASPAR yes 70769398
chr5 175962602 175962614 TFAP2B JASPAR yes 70769399
chr5 175962602 175962614 TFAP2C JASPAR yes 70769400
chr5 175962614 175962617 MYB TRANSFAC yes 68055930
chr5 175962614 175962617 MYB TRANSFAC yes 70769401
chr5 175962616 175962629 SCRT2 JASPAR yes 68055931
chr5 175962616 175962629 SCRT2 JASPAR yes 70769402
chr5 175962621 175962634 ATF4 JASPAR yes 68055932
chr5 175962621 175962634 ATF4 JASPAR yes 70769403
chr5 175962637 175962643 PEA3 TRANSFAC yes 68055933
chr5 175962637 175962643 PEA3 TRANSFAC yes 70769404
chr5 175962638 175962646 FEV JASPAR yes 68055934
chr5 175962638 175962646 FEV JASPAR yes 70769405
chr5 175962640 175962650 REL JASPAR yes 68055935
chr5 175962640 175962650 REL JASPAR yes 70769406
chr5 175962648 175962657 PITX3 JASPAR yes 68055936
chr5 175962648 175962657 PITX3 JASPAR yes 70769407
chr5 175962648 175962658 GSC2 JASPAR yes 68055937
chr5 175962648 175962658 GSC JASPAR yes 68055938
chr5 175962648 175962658 GSC2 JASPAR yes 70769408
chr5 175962648 175962658 GSC JASPAR yes 70769409
chr5 175962649 175962657 OTX1 JASPAR yes 68055939
chr5 175962649 175962657 OTX1 JASPAR yes 70769410
chr5 175962675 175962685 SP1 JASPAR yes 68055940
chr5 175962675 175962685 SP1 JASPAR yes 70769411
SNP sites on vista50295[chr5:175962179-175962700]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 175962188 rs191680748 G A
POLR2A
8728459
chr5 175962449 rs145726120 T A
EBF1 POLR2A
8728460
chr5 175962541 rs148926190 T C
EBF1 POLR2A
8728461
chr5 175962554 rs78853445 A C
EBF1 POLR2A RUNX2
8728462
chr5 175962583 rs184131556 T C
POLR2A
8728463
chr5 175962636 rs559391926 C T
POLR2A
8728464
Genes possibly regulated by vista50295[chr5:175962179-175962700]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 175874629 175937075 + FAF2 ENSG00000113194.8 175874629 0.66 1.0 6011 12450
chr5 175953698 175965026 - RNF44 ENSG00000146083.7 175965026 0.82 1.0 6012 97674
chr5 175969512 176022975 + CDHR2 ENSG00000074276.6 175969512 0.94 1.0 6013 93188
chr5 176022803 176037134 - GPRIN1 ENSG00000169258.6 176037134 0.81 0.99 6014 25566
chr5 176047085 176057530 - SNCB ENSG00000074317.6 176057530 0.86 0.97 6015 5170
chr5 176057683 176073642 + EIF4E1B ENSG00000175766.7 176057683 0.94 1.0 6016 5017
Expression level of Genes
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miRNAs possibly regulated by vista50295[chr5:175962179-175962700]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results