EnhancerDB
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  3. vista50300[chr5:176250976-176251175]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50300[chr5:176250976-176251175]
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Tissue distribution of vista50300
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Transcription factor that possibly regulate vista50300[chr5:176250976-176251175]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 176250887 176251271 USF1 UCSC Txn Factor no Conserved 108537690
chr5 176250975 176250979 NFE TRANSFAC yes 68067574
chr5 176250975 176250979 NFE TRANSFAC yes 70769560
chr5 176250990 176251000 SP1 JASPAR yes 68067575
chr5 176250990 176251000 SP1 JASPAR yes 70769561
chr5 176250998 176251012 EBF1 JASPAR yes 68067576
chr5 176250998 176251012 EBF1 JASPAR yes 70769562
chr5 176251000 176251011 EBF1 JASPAR yes 68067577
chr5 176251000 176251011 EBF1 JASPAR yes 70769563
chr5 176251011 176251021 ID4 JASPAR yes 68067578
chr5 176251011 176251021 TCF3 JASPAR yes 68067579
chr5 176251011 176251021 TCF4 JASPAR yes 68067580
chr5 176251011 176251021 ID4 JASPAR yes 70769564
chr5 176251011 176251021 TCF3 JASPAR yes 70769565
chr5 176251011 176251021 TCF4 JASPAR yes 70769566
chr5 176251012 176251021 SNAI2 JASPAR yes 68067581
chr5 176251012 176251021 SNAI2 JASPAR yes 70769567
chr5 176251012 176251033 REST JASPAR yes 68067582
chr5 176251012 176251033 REST JASPAR yes 70769568
chr5 176251013 176251018 USF2 TRANSFAC yes 68067583
chr5 176251013 176251018 USF2 TRANSFAC yes 70769569
chr5 176251016 176251020 NFE TRANSFAC yes 68067584
chr5 176251016 176251020 NFE TRANSFAC yes 70769570
chr5 176251034 176251038 H4TF2 TRANSFAC yes 68067585
chr5 176251034 176251038 H4TF2 TRANSFAC yes 70769571
chr5 176251049 176251053 LFA1 TRANSFAC yes 68067586
chr5 176251049 176251053 LFA1 TRANSFAC yes 70769572
chr5 176251049 176251060 USF2 JASPAR yes 68067587
chr5 176251049 176251060 USF2 JASPAR yes 70769573
chr5 176251050 176251060 TFEB JASPAR yes 68067588
chr5 176251050 176251060 TFEC JASPAR yes 68067589
chr5 176251050 176251060 TFEB JASPAR yes 70769574
chr5 176251050 176251060 TFEC JASPAR yes 70769575
chr5 176251057 176251062 NFY TRANSFAC yes 68067590
chr5 176251057 176251062 NFY TRANSFAC yes 70769576
chr5 176251071 176251081 MAX JASPAR yes 68067591
chr5 176251071 176251081 MAX JASPAR yes 70769577
chr5 176251071 176251082 USF1 JASPAR yes 68067592
chr5 176251071 176251082 USF2 JASPAR yes 68067593
chr5 176251071 176251082 USF1 JASPAR yes 70769578
chr5 176251071 176251082 USF2 JASPAR yes 70769579
chr5 176251072 176251082 NEUROD2 JASPAR yes 68067594
chr5 176251072 176251082 NEUROD2 JASPAR yes 70769580
chr5 176251072 176251083 USF1 JASPAR yes 68067595
chr5 176251072 176251083 USF1 JASPAR yes 70769581
chr5 176251088 176251106 NFYA JASPAR yes 68067596
chr5 176251088 176251106 NFYA JASPAR yes 70769582
chr5 176251103 176251123 TP53 JASPAR yes 68067597
chr5 176251103 176251123 TP53 JASPAR yes 70769583
chr5 176251104 176251119 TP53 JASPAR yes 68067598
chr5 176251104 176251119 TP53 JASPAR yes 70769584
chr5 176251115 176251126 E2F4 JASPAR yes 68067599
chr5 176251115 176251126 E2F6 JASPAR yes 68067600
chr5 176251115 176251126 E2F4 JASPAR yes 70769585
chr5 176251115 176251126 E2F6 JASPAR yes 70769586
chr5 176251116 176251127 E2F1 JASPAR yes 68067601
chr5 176251116 176251127 E2F1 JASPAR yes 70769587
chr5 176251121 176251133 TFAP2A JASPAR yes 68067602
chr5 176251121 176251133 TFAP2B JASPAR yes 68067603
chr5 176251121 176251133 TFAP2C JASPAR yes 68067604
chr5 176251121 176251133 TFAP2A JASPAR yes 70769588
chr5 176251121 176251133 TFAP2B JASPAR yes 70769589
chr5 176251121 176251133 TFAP2C JASPAR yes 70769590
chr5 176251126 176251136 SP1 JASPAR yes 68067605
chr5 176251126 176251136 SP1 JASPAR yes 70769591
chr5 176251128 176251133 SP1 TRANSFAC yes 68067606
chr5 176251128 176251133 SP1 TRANSFAC yes 70769592
SNP sites on vista50300[chr5:176250976-176251175]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 176250986 rs520330 T C
USF1
8729892
chr5 176250994 rs187651463 C G
SP1 USF1
8729893
chr5 176251002 rs151115853 C G
EBF1 USF1
8729894
chr5 176251047 rs141119652 C G
USF1
8729895
chr5 176251133 rs73340052 G A
SP1 TFAP2A TFAP2B TFAP2C USF1
8729896
chr5 176251140 rs532605574 C G,T
USF1
8729897
chr5 176251160 rs149821074 T C
USF1
8729898
chr5 176251161 rs569273474 T A
USF1
8729899
Genes possibly regulated by vista50300[chr5:176250976-176251175]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 176237478 176307897 + UNC5A ENSG00000113763.6 176237478 0.78 1.0 6018 86502
chr5 176307870 176326333 - HK3 ENSG00000160883.6 176326333 0.97 1.0 6019 24842
Expression level of Genes
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miRNAs possibly regulated by vista50300[chr5:176250976-176251175]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results