EnhancerDB
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  3. vista50308[chr5:176526460-176526848]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50308[chr5:176526460-176526848]
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Tissue distribution of vista50308
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Transcription factor that possibly regulate vista50308[chr5:176526460-176526848]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 176526460 176526475 FOXP1 JASPAR yes 68076693
chr5 176526460 176526475 FOXP1 JASPAR yes 70769977
chr5 176526461 176526476 FOXP1 JASPAR yes 68076694
chr5 176526461 176526476 FOXP1 JASPAR yes 70769978
chr5 176526462 176526477 FOXP1 JASPAR yes 68076695
chr5 176526462 176526477 FOXP1 JASPAR yes 70769979
chr5 176526462 176526483 IRF1 JASPAR yes 68076696
chr5 176526462 176526483 IRF1 JASPAR yes 70769980
chr5 176526463 176526478 FOXP1 JASPAR yes 68076697
chr5 176526463 176526478 FOXP1 JASPAR yes 70769981
chr5 176526463 176526484 IRF1 JASPAR yes 68076698
chr5 176526463 176526484 IRF1 JASPAR yes 70769982
chr5 176526464 176526479 FOXP1 JASPAR yes 68076699
chr5 176526464 176526479 FOXP1 JASPAR yes 70769983
chr5 176526466 176526481 FOXP1 JASPAR yes 68076700
chr5 176526466 176526481 FOXP1 JASPAR yes 70769984
chr5 176526468 176526483 FOXP1 JASPAR yes 68076701
chr5 176526468 176526483 FOXP1 JASPAR yes 70769985
chr5 176526475 176526493 RARA JASPAR yes 68076702
chr5 176526475 176526493 RARA JASPAR yes 70769986
chr5 176526505 176526509 H4TF2 TRANSFAC yes 68076703
chr5 176526505 176526509 H4TF2 TRANSFAC yes 70769987
chr5 176526552 176526556 NFE TRANSFAC yes 68076704
chr5 176526552 176526556 NFE TRANSFAC yes 70769988
chr5 176526574 176526584 ID4 JASPAR yes 68076705
chr5 176526574 176526584 TCF3 JASPAR yes 68076706
chr5 176526574 176526584 TCF4 JASPAR yes 68076707
chr5 176526574 176526584 ID4 JASPAR yes 70769989
chr5 176526574 176526584 TCF3 JASPAR yes 70769990
chr5 176526574 176526584 TCF4 JASPAR yes 70769991
chr5 176526575 176526584 SNAI2 JASPAR yes 68076708
chr5 176526575 176526584 SNAI2 JASPAR yes 70769992
chr5 176526576 176526581 USF2 TRANSFAC yes 68076709
chr5 176526576 176526581 USF2 TRANSFAC yes 70769993
chr5 176526579 176526583 NFE TRANSFAC yes 68076710
chr5 176526579 176526583 NFE TRANSFAC yes 70769994
chr5 176526580 176526587 E2F1 TRANSFAC yes 68076711
chr5 176526580 176526587 E2F1 TRANSFAC yes 70769995
chr5 176526589 176526604 ZIC3 JASPAR yes 68076712
chr5 176526589 176526604 ZIC3 JASPAR yes 70769996
chr5 176526590 176526601 EBF1 JASPAR yes 68076713
chr5 176526590 176526601 EBF1 JASPAR yes 70769997
chr5 176526612 176526618 PEA3 TRANSFAC yes 68076714
chr5 176526612 176526618 PEA3 TRANSFAC yes 70769998
chr5 176526617 176526627 MAX JASPAR yes 68076715
chr5 176526617 176526627 MAX JASPAR yes 70769999
chr5 176526617 176526629 HES5 JASPAR yes 68076716
chr5 176526617 176526629 HES5 JASPAR yes 70770000
chr5 176526618 176526628 BHLHE40 JASPAR yes 68076717
chr5 176526618 176526628 CLOCK JASPAR yes 68076718
chr5 176526618 176526628 HEY1 JASPAR yes 68076719
chr5 176526618 176526628 MAX JASPAR yes 68076720
chr5 176526618 176526628 MLXIPL JASPAR yes 68076721
chr5 176526618 176526628 MNT JASPAR yes 68076722
chr5 176526618 176526628 BHLHE40 JASPAR yes 70770001
chr5 176526618 176526628 CLOCK JASPAR yes 70770002
chr5 176526618 176526628 HEY1 JASPAR yes 70770003
chr5 176526618 176526628 MAX JASPAR yes 70770004
chr5 176526618 176526628 MLXIPL JASPAR yes 70770005
chr5 176526618 176526628 MNT JASPAR yes 70770006
chr5 176526620 176526625 MYC TRANSFAC yes 68076723
chr5 176526620 176526625 USF1 TRANSFAC yes 68076724
chr5 176526620 176526625 USF2 TRANSFAC yes 68076725
chr5 176526620 176526625 MYC TRANSFAC yes 70770007
chr5 176526620 176526625 USF1 TRANSFAC yes 70770008
chr5 176526620 176526625 USF2 TRANSFAC yes 70770009
chr5 176526637 176526649 TFAP2A JASPAR yes 68076726
chr5 176526637 176526649 TFAP2A JASPAR yes 70770010
chr5 176526638 176526650 INSM1 JASPAR yes 68076727
chr5 176526638 176526650 INSM1 JASPAR yes 70770011
chr5 176526643 176526653 SP1 JASPAR yes 68076728
chr5 176526643 176526653 SP1 JASPAR yes 70770012
chr5 176526645 176526651 MAZ TRANSFAC yes 68076729
chr5 176526645 176526651 MAZ TRANSFAC yes 70770013
chr5 176526648 176526658 TBX21 JASPAR yes 68076730
chr5 176526648 176526658 TBX21 JASPAR yes 70770014
chr5 176526648 176526659 TBX20 JASPAR yes 68076731
chr5 176526648 176526659 TBX2 JASPAR yes 68076732
chr5 176526648 176526659 TBX20 JASPAR yes 70770015
chr5 176526648 176526659 TBX2 JASPAR yes 70770016
chr5 176526649 176526657 MGA JASPAR yes 68076733
chr5 176526649 176526657 TBX15 JASPAR yes 68076734
chr5 176526649 176526657 TBX1 JASPAR yes 68076735
chr5 176526649 176526657 TBX4 JASPAR yes 68076736
chr5 176526649 176526657 TBX5 JASPAR yes 68076737
chr5 176526649 176526657 MGA JASPAR yes 70770017
chr5 176526649 176526657 TBX15 JASPAR yes 70770018
chr5 176526649 176526657 TBX1 JASPAR yes 70770019
chr5 176526649 176526657 TBX4 JASPAR yes 70770020
chr5 176526649 176526657 TBX5 JASPAR yes 70770021
chr5 176526718 176526732 PLAG1 JASPAR yes 68076738
chr5 176526718 176526732 PLAG1 JASPAR yes 70770022
chr5 176526726 176526740 GLIS2 JASPAR yes 68076739
chr5 176526726 176526740 GLIS2 JASPAR yes 70770023
chr5 176526726 176526741 ZIC3 JASPAR yes 68076740
chr5 176526726 176526741 ZIC3 JASPAR yes 70770024
chr5 176526730 176526736 SP1 TRANSFAC yes 68076741
chr5 176526730 176526736 SP1 TRANSFAC yes 70770025
chr5 176526747 176526752 GATA2 JASPAR yes 68076742
chr5 176526747 176526752 GATA2 JASPAR yes 70770026
chr5 176526755 176526776 ZNF263 JASPAR yes 68076743
chr5 176526755 176526776 ZNF263 JASPAR yes 70770027
chr5 176526756 176526770 PLAG1 JASPAR yes 68076744
chr5 176526756 176526770 PLAG1 JASPAR yes 70770028
chr5 176526763 176526774 E2F6 JASPAR yes 68076745
chr5 176526763 176526774 E2F6 JASPAR yes 70770029
chr5 176526770 176526789 CTCF JASPAR yes 68076746
chr5 176526770 176526789 CTCF JASPAR yes 70770030
chr5 176526775 176526784 SNAI2 JASPAR yes 68076747
chr5 176526775 176526784 SNAI2 JASPAR yes 70770031
chr5 176526819 176526830 E2F6 JASPAR yes 68076748
chr5 176526819 176526830 E2F6 JASPAR yes 70770032
chr5 176526848 176526851 MYB TRANSFAC yes 68076749
chr5 176526848 176526851 MYB TRANSFAC yes 70770033
SNP sites on vista50308[chr5:176526460-176526848]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 176526497 rs190045210 C T no 8730914
chr5 176526644 rs551548888 G C,T
INSM1 SP1 TFAP2A
8730915
chr5 176526666 rs570485287 C CCCATGGGTTGGGCTG no 8730916
chr5 176526666 rs879632433 C CCCATGGGTTGGGCTG,CCCATGGGTTGGGCTGCCATGGGTTGGGCTG no 8730917
chr5 176526686 rs183119737 G A no 8730918
chr5 176526728 rs144244583 GC G
GLIS2 PLAG1 ZIC3
8730919
chr5 176526759 rs192498456 C G
PLAG1 ZNF263
8730920
Genes possibly regulated by vista50308[chr5:176526460-176526848]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 176332006 176449634 - UIMC1 ENSG00000087206.12 176449634 0.56 0.99 6020 23174
chr5 176449697 176508190 + ZNF346 ENSG00000113761.7 176449697 0.64 0.99 6021 23237
chr5 176513887 176525145 + FGFR4 ENSG00000160867.10 176513887 0.87 1.0 6022 87427
chr5 176560026 176727216 + NSD1 ENSG00000165671.14 176560026 0.71 0.99 6023 66822
Expression level of Genes
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miRNAs possibly regulated by vista50308[chr5:176526460-176526848]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results