EnhancerDB
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  3. vista50311[chr5:176782864-176783054]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50311[chr5:176782864-176783054]
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Tissue distribution of vista50311
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Transcription factor that possibly regulate vista50311[chr5:176782864-176783054]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 176782785 176783169 USF1 UCSC Txn Factor no Conserved 108537710
chr5 176782857 176782872 PRDM1 JASPAR yes 68092040
chr5 176782857 176782872 PRDM1 JASPAR yes 70770091
chr5 176782858 176782879 ZNF263 JASPAR yes 68092041
chr5 176782858 176782879 ZNF263 JASPAR yes 70770092
chr5 176782866 176782877 E2F6 JASPAR yes 68092042
chr5 176782866 176782877 E2F6 JASPAR yes 70770093
chr5 176782868 176782876 SP1 TRANSFAC yes 68092043
chr5 176782868 176782876 SP1 TRANSFAC yes 70770094
chr5 176782868 176782878 SP1 JASPAR yes 68092044
chr5 176782868 176782878 SP1 JASPAR yes 70770095
chr5 176782870 176782876 MAZ TRANSFAC yes 68092045
chr5 176782870 176782876 MAZ TRANSFAC yes 70770096
chr5 176782881 176782885 LFA1 TRANSFAC yes 68092046
chr5 176782881 176782885 LFA1 TRANSFAC yes 70770097
chr5 176782898 176782904 TCF1 TRANSFAC yes 68092047
chr5 176782898 176782904 TCF1 TRANSFAC yes 70770098
chr5 176782898 176782905 TCF4 TRANSFAC yes 68092048
chr5 176782898 176782905 TCF4 TRANSFAC yes 70770099
chr5 176782913 176782927 JUN JASPAR yes 68092049
chr5 176782913 176782927 JUN JASPAR yes 70770100
chr5 176782914 176782926 IRF1 JASPAR yes 68092050
chr5 176782914 176782926 IRF1 JASPAR yes 70770101
chr5 176782918 176782927 JDP2 JASPAR yes 68092051
chr5 176782918 176782927 JDP2 JASPAR yes 70770102
chr5 176782919 176782931 HES5 JASPAR yes 68092052
chr5 176782919 176782931 HES7 JASPAR yes 68092053
chr5 176782919 176782931 PKNOX1 JASPAR yes 68092054
chr5 176782919 176782931 PKNOX2 JASPAR yes 68092055
chr5 176782919 176782931 TGIF1 JASPAR yes 68092056
chr5 176782919 176782931 TGIF2 JASPAR yes 68092057
chr5 176782919 176782931 HES5 JASPAR yes 70770103
chr5 176782919 176782931 HES7 JASPAR yes 70770104
chr5 176782919 176782931 PKNOX1 JASPAR yes 70770105
chr5 176782919 176782931 PKNOX2 JASPAR yes 70770106
chr5 176782919 176782931 TGIF1 JASPAR yes 70770107
chr5 176782919 176782931 TGIF2 JASPAR yes 70770108
chr5 176782920 176782930 CLOCK JASPAR yes 68092058
chr5 176782920 176782930 NEUROG2 JASPAR yes 68092059
chr5 176782920 176782930 CLOCK JASPAR yes 70770109
chr5 176782920 176782930 NEUROG2 JASPAR yes 70770110
chr5 176782927 176782937 SREBF2 JASPAR yes 68092060
chr5 176782927 176782937 SREBF2 JASPAR yes 70770111
chr5 176782938 176782942 YY1 TRANSFAC yes 68092061
chr5 176782938 176782942 YY1 TRANSFAC yes 70770112
chr5 176782945 176782955 NFIA JASPAR yes 68092062
chr5 176782945 176782955 NFIA JASPAR yes 70770113
chr5 176782947 176782953 NFIC JASPAR yes 68092063
chr5 176782947 176782953 NFIC JASPAR yes 70770114
chr5 176782959 176782963 ESR1 TRANSFAC yes 68092064
chr5 176782959 176782963 ESR1 TRANSFAC yes 70770115
chr5 176782959 176782969 MAX JASPAR yes 68092065
chr5 176782959 176782969 MAX JASPAR yes 70770116
chr5 176782959 176782970 USF1 JASPAR yes 68092066
chr5 176782959 176782970 USF2 JASPAR yes 68092067
chr5 176782959 176782970 USF1 JASPAR yes 70770117
chr5 176782959 176782970 USF2 JASPAR yes 70770118
chr5 176782969 176782982 ZBTB18 JASPAR yes 68092068
chr5 176782969 176782982 ZBTB18 JASPAR yes 70770119
chr5 176782982 176782998 ZNF143 JASPAR yes 68092069
chr5 176782982 176782998 ZNF143 JASPAR yes 70770120
chr5 176783006 176783020 CREB3L1 JASPAR yes 68092070
chr5 176783006 176783020 CREB3L1 JASPAR yes 70770121
chr5 176783007 176783017 MAX JASPAR yes 68092071
chr5 176783007 176783017 MAX JASPAR yes 70770122
chr5 176783007 176783018 USF1 JASPAR yes 68092072
chr5 176783007 176783018 USF2 JASPAR yes 68092073
chr5 176783007 176783018 USF1 JASPAR yes 70770123
chr5 176783007 176783018 USF2 JASPAR yes 70770124
chr5 176783007 176783019 HES5 JASPAR yes 68092074
chr5 176783007 176783019 HES7 JASPAR yes 68092075
chr5 176783007 176783019 HES5 JASPAR yes 70770125
chr5 176783007 176783019 HES7 JASPAR yes 70770126
chr5 176783008 176783018 BHLHE40 JASPAR yes 68092076
chr5 176783008 176783018 HEY1 JASPAR yes 68092077
chr5 176783008 176783018 HEY2 JASPAR yes 68092078
chr5 176783008 176783018 MAX JASPAR yes 68092079
chr5 176783008 176783018 MLX JASPAR yes 68092080
chr5 176783008 176783018 MNT JASPAR yes 68092081
chr5 176783008 176783018 TFE3 JASPAR yes 68092082
chr5 176783008 176783018 TFEB JASPAR yes 68092083
chr5 176783008 176783018 BHLHE40 JASPAR yes 70770127
chr5 176783008 176783018 HEY1 JASPAR yes 70770128
chr5 176783008 176783018 HEY2 JASPAR yes 70770129
chr5 176783008 176783018 MAX JASPAR yes 70770130
chr5 176783008 176783018 MLX JASPAR yes 70770131
chr5 176783008 176783018 MNT JASPAR yes 70770132
chr5 176783008 176783018 TFE3 JASPAR yes 70770133
chr5 176783008 176783018 TFEB JASPAR yes 70770134
chr5 176783008 176783019 USF2 JASPAR yes 68092084
chr5 176783008 176783019 USF2 JASPAR yes 70770135
chr5 176783009 176783016 USF1 JASPAR yes 68092085
chr5 176783009 176783016 USF1 JASPAR yes 70770136
chr5 176783009 176783019 MAX JASPAR yes 68092086
chr5 176783009 176783019 MAX JASPAR yes 70770137
chr5 176783010 176783015 MYC TRANSFAC yes 68092087
chr5 176783010 176783015 USF1 TRANSFAC yes 68092088
chr5 176783010 176783015 USF2 TRANSFAC yes 68092089
chr5 176783010 176783015 MYC TRANSFAC yes 70770138
chr5 176783010 176783015 USF1 TRANSFAC yes 70770139
chr5 176783010 176783015 USF2 TRANSFAC yes 70770140
chr5 176783033 176783048 RUNX2 JASPAR yes 68092090
chr5 176783033 176783048 RUNX2 JASPAR yes 70770141
chr5 176783035 176783043 HOXA5 JASPAR yes 68092091
chr5 176783035 176783043 HOXA5 JASPAR yes 70770142
chr5 176783037 176783047 RUNX3 JASPAR yes 68092092
chr5 176783037 176783047 RUNX3 JASPAR yes 70770143
SNP sites on vista50311[chr5:176782864-176783054]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 176782942 rs149442188 T C
USF1 YY1
8732286
Genes possibly regulated by vista50311[chr5:176782864-176783054]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 176728199 176730745 - RAB24 ENSG00000169228.9 176730745 0.76 0.95 6024 47881
chr5 176728462 176739758 - MXD3 ENSG00000213347.6 176739758 0.86 1.0 6025 56894
chr5 176730775 176733960 + PRELID1 ENSG00000169230.5 176730775 0.81 1.0 6026 47911
chr5 176758563 176778853 - LMAN2 ENSG00000169223.10 176778853 0.71 1.0 6027 95989
chr5 176784838 176799602 + RGS14 ENSG00000169220.13 176784838 0.79 1.0 6028 98216
chr5 176806236 176825849 + SLC34A1 ENSG00000131183.6 176806236 1.0 0.9 6029 76818
chr5 176827108 176827637 - PFN3 ENSG00000196570.2 176827637 1.0 1.0 6030 55417
chr5 176829141 176836577 - F12 ENSG00000131187.5 176836577 1.0 1.0 6031 46477
chr5 176830205 176869902 + GRK6 ENSG00000198055.6 176830205 0.79 1.0 6032 52849
chr5 176873446 176883283 + PRR7 ENSG00000131188.7 176873446 0.76 1.0 6033 9608
Expression level of Genes
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miRNAs possibly regulated by vista50311[chr5:176782864-176783054]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results