EnhancerDB
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  3. vista50313[chr5:176791475-176791863]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50313[chr5:176791475-176791863]
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Tissue distribution of vista50313
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Transcription factor that possibly regulate vista50313[chr5:176791475-176791863]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 176791560 176791947 NFIC UCSC Txn Factor no Conserved 108537714
chr5 176791561 176791989 RELA UCSC Txn Factor no Conserved 108537715
chr5 176791562 176791921 RUNX3 UCSC Txn Factor no Conserved 108537716
chr5 176791637 176791908 BATF UCSC Txn Factor no Conserved 108537717
chr5 176791652 176791881 IRF4 UCSC Txn Factor no Conserved 108537718
chr5 176791475 176791494 PAX5 JASPAR yes 68093309
chr5 176791475 176791494 PAX5 JASPAR yes 70770181
chr5 176791478 176791484 SP1 TRANSFAC yes 68093310
chr5 176791478 176791484 SP1 TRANSFAC yes 70770182
chr5 176791529 176791533 NFE TRANSFAC yes 68093311
chr5 176791529 176791533 NFE TRANSFAC yes 70770183
chr5 176791535 176791549 RXRB JASPAR yes 68093312
chr5 176791535 176791549 RXRG JASPAR yes 68093313
chr5 176791535 176791549 RXRB JASPAR yes 70770184
chr5 176791535 176791549 RXRG JASPAR yes 70770185
chr5 176791535 176791550 NR2C2 JASPAR yes 68093314
chr5 176791535 176791550 NR2C2 JASPAR yes 70770186
chr5 176791542 176791545 MYB TRANSFAC yes 68093315
chr5 176791542 176791545 MYB TRANSFAC yes 70770187
chr5 176791577 176791590 ELF1 JASPAR yes 68093316
chr5 176791577 176791590 ELF1 JASPAR yes 70770188
chr5 176791578 176791590 EHF JASPAR yes 68093317
chr5 176791578 176791590 ELF1 JASPAR yes 68093318
chr5 176791578 176791590 ELF4 JASPAR yes 68093319
chr5 176791578 176791590 EHF JASPAR yes 70770189
chr5 176791578 176791590 ELF1 JASPAR yes 70770190
chr5 176791578 176791590 ELF4 JASPAR yes 70770191
chr5 176791578 176791591 ELF3 JASPAR yes 68093320
chr5 176791578 176791591 ELF3 JASPAR yes 70770192
chr5 176791579 176791590 ELF5 JASPAR yes 68093321
chr5 176791579 176791590 SPDEF JASPAR yes 68093322
chr5 176791579 176791590 ELF5 JASPAR yes 70770193
chr5 176791579 176791590 SPDEF JASPAR yes 70770194
chr5 176791580 176791587 ETS1 TRANSFAC yes 68093323
chr5 176791580 176791587 ETS1 TRANSFAC yes 70770195
chr5 176791580 176791590 ETV6 JASPAR yes 68093324
chr5 176791580 176791590 ETV6 JASPAR yes 70770196
chr5 176791580 176791591 ELK4 JASPAR yes 68093325
chr5 176791580 176791591 FLI1 JASPAR yes 68093326
chr5 176791580 176791591 ELK4 JASPAR yes 70770197
chr5 176791580 176791591 FLI1 JASPAR yes 70770198
chr5 176791581 176791589 EHF JASPAR yes 68093327
chr5 176791581 176791589 FEV JASPAR yes 68093328
chr5 176791581 176791589 EHF JASPAR yes 70770199
chr5 176791581 176791589 FEV JASPAR yes 70770200
chr5 176791582 176791589 SPI1 JASPAR yes 68093329
chr5 176791582 176791589 SPI1 JASPAR yes 70770201
chr5 176791582 176791602 RREB1 JASPAR yes 68093330
chr5 176791582 176791602 RREB1 JASPAR yes 70770202
chr5 176791610 176791616 ZNF354C JASPAR yes 68093331
chr5 176791610 176791616 ZNF354C JASPAR yes 70770203
chr5 176791618 176791624 ZNF354C JASPAR yes 68093332
chr5 176791618 176791624 ZNF354C JASPAR yes 70770204
chr5 176791622 176791637 HNF4G JASPAR yes 68093333
chr5 176791622 176791637 HNF4G JASPAR yes 70770205
chr5 176791622 176791640 ESR2 JASPAR yes 68093334
chr5 176791622 176791640 ESR2 JASPAR yes 70770206
chr5 176791623 176791638 HNF4A JASPAR yes 68093335
chr5 176791623 176791638 HNF4A JASPAR yes 70770207
chr5 176791624 176791644 ESR1 JASPAR yes 68093336
chr5 176791624 176791644 ESR1 JASPAR yes 70770208
chr5 176791627 176791633 SOX10 JASPAR yes 68093337
chr5 176791627 176791633 SOX10 JASPAR yes 70770209
chr5 176791628 176791649 REST JASPAR yes 68093338
chr5 176791628 176791649 REST JASPAR yes 70770210
chr5 176791682 176791688 GATA3 JASPAR yes 68093339
chr5 176791682 176791688 GATA3 JASPAR yes 70770211
chr5 176791688 176791693 TFAP2A TRANSFAC yes 68093340
chr5 176791688 176791693 TFAP2A TRANSFAC yes 70770212
chr5 176791688 176791694 MZF1 JASPAR yes 68093341
chr5 176791688 176791694 MZF1 JASPAR yes 70770213
chr5 176791690 176791695 ETS2 TRANSFAC yes 68093342
chr5 176791690 176791695 ETS2 TRANSFAC yes 70770214
chr5 176791705 176791716 STAT1 JASPAR yes 68093343
chr5 176791705 176791716 STAT3 JASPAR yes 68093344
chr5 176791705 176791716 STAT1 JASPAR yes 70770215
chr5 176791705 176791716 STAT3 JASPAR yes 70770216
chr5 176791709 176791717 EHF JASPAR yes 68093345
chr5 176791709 176791717 EHF JASPAR yes 70770217
chr5 176791711 176791726 FOXP1 JASPAR yes 68093346
chr5 176791711 176791726 FOXP1 JASPAR yes 70770218
chr5 176791714 176791735 IRF1 JASPAR yes 68093347
chr5 176791714 176791735 IRF1 JASPAR yes 70770219
chr5 176791718 176791732 STAT1 JASPAR yes 68093348
chr5 176791718 176791732 STAT1 JASPAR yes 70770220
chr5 176791718 176791733 STAT2 JASPAR yes 68093349
chr5 176791718 176791733 STAT2 JASPAR yes 70770221
chr5 176791734 176791746 ZBTB7B JASPAR yes 68093350
chr5 176791734 176791746 ZBTB7C JASPAR yes 68093351
chr5 176791734 176791746 ZBTB7B JASPAR yes 70770222
chr5 176791734 176791746 ZBTB7C JASPAR yes 70770223
chr5 176791744 176791755 NFE2 JASPAR yes 68093352
chr5 176791744 176791755 NFE2 JASPAR yes 70770224
chr5 176791745 176791754 JDP2 JASPAR yes 68093353
chr5 176791745 176791754 JDP2 JASPAR yes 70770225
chr5 176791746 176791757 BATF JASPAR yes 68093354
chr5 176791746 176791757 BATF JASPAR yes 70770226
chr5 176791751 176791755 YY1 TRANSFAC yes 68093355
chr5 176791751 176791755 YY1 TRANSFAC yes 70770227
chr5 176791763 176791784 IRF1 JASPAR yes 68093356
chr5 176791763 176791784 IRF1 JASPAR yes 70770228
chr5 176791767 176791781 IRF8 JASPAR yes 68093357
chr5 176791767 176791781 IRF8 JASPAR yes 70770229
chr5 176791767 176791782 IRF9 JASPAR yes 68093358
chr5 176791767 176791782 IRF9 JASPAR yes 70770230
chr5 176791778 176791786 HOXA5 JASPAR yes 68093359
chr5 176791778 176791786 HOXA5 JASPAR yes 70770231
chr5 176791785 176791790 NFY TRANSFAC yes 68093360
chr5 176791785 176791790 NFY TRANSFAC yes 70770232
chr5 176791788 176791798 RELA JASPAR yes 68093361
chr5 176791788 176791798 RELA JASPAR yes 70770233
chr5 176791788 176791799 NFKB1 JASPAR yes 68093362
chr5 176791788 176791799 NFKB1 JASPAR yes 70770234
chr5 176791792 176791803 STAT1 JASPAR yes 68093363
chr5 176791792 176791803 STAT1 JASPAR yes 70770235
chr5 176791792 176791811 RFX2 JASPAR yes 68093364
chr5 176791792 176791811 RFX2 JASPAR yes 70770236
chr5 176791822 176791826 LFA1 TRANSFAC yes 68093365
chr5 176791822 176791826 LFA1 TRANSFAC yes 70770237
SNP sites on vista50313[chr5:176791475-176791863]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 176791819 rs112546360 C T
BATF IRF4 NFIC RELA RUNX3
8732382
Genes possibly regulated by vista50313[chr5:176791475-176791863]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 176728199 176730745 - RAB24 ENSG00000169228.9 176730745 0.76 0.95 6024 39270
chr5 176728462 176739758 - MXD3 ENSG00000213347.6 176739758 0.86 1.0 6025 48283
chr5 176730775 176733960 + PRELID1 ENSG00000169230.5 176730775 0.81 1.0 6026 39300
chr5 176758563 176778853 - LMAN2 ENSG00000169223.10 176778853 0.71 1.0 6027 87378
chr5 176784838 176799602 + RGS14 ENSG00000169220.13 176784838 0.79 1.0 6028 93363
chr5 176806236 176825849 + SLC34A1 ENSG00000131183.6 176806236 1.0 0.9 6029 85627
chr5 176827108 176827637 - PFN3 ENSG00000196570.2 176827637 1.0 1.0 6030 64226
chr5 176829141 176836577 - F12 ENSG00000131187.5 176836577 1.0 1.0 6031 55286
chr5 176830205 176869902 + GRK6 ENSG00000198055.6 176830205 0.79 1.0 6032 61658
chr5 176873446 176883283 + PRR7 ENSG00000131188.7 176873446 0.76 1.0 6033 18417
Expression level of Genes
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miRNAs possibly regulated by vista50313[chr5:176791475-176791863]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results