EnhancerDB
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  3. vista50320[chr5:177042588-177043196]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50320[chr5:177042588-177043196]
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Tissue distribution of vista50320
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Transcription factor that possibly regulate vista50320[chr5:177042588-177043196]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 177042603 177042607 NFE TRANSFAC yes 70770527
chr5 177042603 177042608 GATA1 TRANSFAC yes 70770528
chr5 177042603 177042609 GATA3 JASPAR yes 70770529
chr5 177042611 177042617 ZNF354C JASPAR yes 70770530
chr5 177042616 177042626 ETS1 JASPAR yes 70770531
chr5 177042616 177042627 ETV2 JASPAR yes 70770532
chr5 177042623 177042634 ESRRB JASPAR yes 70770533
chr5 177042632 177042649 NR3C1 JASPAR yes 70770534
chr5 177042632 177042649 NR3C2 JASPAR yes 70770535
chr5 177042634 177042649 AR JASPAR yes 70770536
chr5 177042661 177042677 SOX4 JASPAR yes 70770537
chr5 177042673 177042683 HESX1 JASPAR yes 70770538
chr5 177042673 177042683 LBX2 JASPAR yes 70770539
chr5 177042673 177042683 MIXL1 JASPAR yes 70770540
chr5 177042673 177042683 RAX JASPAR yes 70770541
chr5 177042674 177042682 LHX9 JASPAR yes 70770542
chr5 177042674 177042682 SHOX JASPAR yes 70770543
chr5 177042692 177042699 MEIS1 JASPAR yes 70770544
chr5 177042717 177042722 GATA2 JASPAR yes 70770545
chr5 177042719 177042733 SPIC JASPAR yes 70770546
chr5 177042721 177042735 ONECUT3 JASPAR yes 70770547
chr5 177042749 177042761 HNF1B JASPAR yes 70770548
chr5 177042752 177042760 HOXA5 JASPAR yes 70770549
chr5 177042785 177042789 TEAD2 TRANSFAC yes 70770550
chr5 177042803 177042807 YY1 TRANSFAC yes 70770551
chr5 177042870 177042874 YY1 TRANSFAC yes 70770552
chr5 177042879 177042888 SRY JASPAR yes 70770553
chr5 177042881 177042884 MYB TRANSFAC yes 70770554
chr5 177042902 177042916 RORA JASPAR yes 70770555
chr5 177042903 177042913 RORA JASPAR yes 70770556
chr5 177042911 177042922 NFIL3 JASPAR yes 70770557
chr5 177042912 177042924 DBP JASPAR yes 70770558
chr5 177042912 177042924 HLF JASPAR yes 70770559
chr5 177042912 177042924 TEF JASPAR yes 70770560
chr5 177042914 177042925 NFIL3 JASPAR yes 70770561
chr5 177042917 177042921 TEAD2 TRANSFAC yes 70770562
chr5 177042932 177042937 GATA2 JASPAR yes 70770563
chr5 177042933 177042949 SOX8 JASPAR yes 70770564
chr5 177042942 177042946 YY1 TRANSFAC yes 70770565
chr5 177042950 177042964 TCF7L2 JASPAR yes 70770566
chr5 177042961 177042975 GATA2 JASPAR yes 70770567
chr5 177042962 177042980 SRF JASPAR yes 70770568
chr5 177042965 177042973 GATA3 JASPAR yes 70770569
chr5 177042965 177042973 GATA5 JASPAR yes 70770570
chr5 177043013 177043016 MYB TRANSFAC yes 70770571
chr5 177043014 177043030 SOX8 JASPAR yes 70770572
chr5 177043038 177043053 MEF2C JASPAR yes 70770573
chr5 177043039 177043051 MEF2A JASPAR yes 70770574
chr5 177043039 177043051 MEF2D JASPAR yes 70770575
chr5 177043040 177043050 MEF2A JASPAR yes 70770576
chr5 177043041 177043045 YY1 TRANSFAC yes 70770577
chr5 177043045 177043058 POU3F3 JASPAR yes 70770578
chr5 177043046 177043058 POU3F1 JASPAR yes 70770579
chr5 177043049 177043061 FOXI1 JASPAR yes 70770580
chr5 177043049 177043064 MEF2C JASPAR yes 70770581
chr5 177043052 177043056 YY1 TRANSFAC yes 70770582
chr5 177043062 177043074 MEF2A JASPAR yes 70770583
chr5 177043062 177043074 MEF2D JASPAR yes 70770584
chr5 177043063 177043073 MEF2A JASPAR yes 70770585
chr5 177043066 177043070 YY1 TRANSFAC yes 70770586
chr5 177043102 177043123 IRF1 JASPAR yes 70770587
chr5 177043122 177043131 THAP1 JASPAR yes 70770588
chr5 177043132 177043138 SOX10 JASPAR yes 70770589
chr5 177043145 177043160 MEF2A JASPAR yes 70770590
chr5 177043147 177043159 MEF2A JASPAR yes 70770591
chr5 177043147 177043159 MEF2B JASPAR yes 70770592
chr5 177043147 177043159 MEF2D JASPAR yes 70770593
chr5 177043150 177043168 E2F3 JASPAR yes 70770594
chr5 177043151 177043155 YY1 TRANSFAC yes 70770595
chr5 177043153 177043165 E2F1 JASPAR yes 70770596
chr5 177043167 177043171 YY1 TRANSFAC yes 70770597
chr5 177043185 177043191 GATA3 JASPAR yes 70770598
SNP sites on vista50320[chr5:177042588-177043196]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 177042620 rs4976704 T C
ETS1 ETV2
8733432
chr5 177042798 rs78617146 C T no 8733433
chr5 177042849 rs398050990 GCT G no 8733434
chr5 177042849 rs71585645 GCT G no 8733435
chr5 177042875 rs114205302 A G no 8733436
chr5 177043007 rs12515554 T C no 8733437
chr5 177043044 rs149393304 T C
MEF2A MEF2C MEF2D YY1
8733438
chr5 177043079 rs150489077 G GT no 8733439
chr5 177043079 rs541475989 G GT no 8733440
chr5 177043113 rs6896198 T A
IRF1
8733441
Genes possibly regulated by vista50320[chr5:177042588-177043196]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 176938578 176944470 - DDX41 ENSG00000183258.7 176944470 0.6 1.0 6037 1882
chr5 176946789 176981542 - FAM193B ENSG00000146067.11 176981542 0.63 1.0 6038 38954
chr5 177019159 177023125 + TMED9 ENSG00000184840.7 177019159 0.64 1.0 6039 76571
chr5 177027101 177037348 + B4GALT7 ENSG00000027847.9 177027101 0.58 1.0 6040 84513
Expression level of Genes
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miRNAs possibly regulated by vista50320[chr5:177042588-177043196]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results