EnhancerDB
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  3. vista50326[chr5:177542150-177542670]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50326[chr5:177542150-177542670]
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Tissue distribution of vista50326
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Transcription factor that possibly regulate vista50326[chr5:177542150-177542670]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 177542150 177542165 JUND JASPAR yes 68108472
chr5 177542150 177542165 JUND JASPAR yes 70770774
chr5 177542157 177542170 ATF4 JASPAR yes 68108473
chr5 177542157 177542170 ATF4 JASPAR yes 70770775
chr5 177542235 177542246 ELK4 JASPAR yes 68108474
chr5 177542235 177542246 ELK4 JASPAR yes 70770776
chr5 177542236 177542246 ETV6 JASPAR yes 68108475
chr5 177542236 177542246 ETV6 JASPAR yes 70770777
chr5 177542236 177542248 ELF4 JASPAR yes 68108476
chr5 177542236 177542248 ELF4 JASPAR yes 70770778
chr5 177542238 177542244 ETS1 JASPAR yes 68108477
chr5 177542238 177542244 SPI1 JASPAR yes 68108478
chr5 177542238 177542244 ETS1 JASPAR yes 70770779
chr5 177542238 177542244 SPI1 JASPAR yes 70770780
chr5 177542257 177542261 NFE TRANSFAC yes 68108479
chr5 177542257 177542261 NFE TRANSFAC yes 70770781
chr5 177542267 177542276 NKX2-8 JASPAR yes 68108480
chr5 177542267 177542276 NKX2-8 JASPAR yes 70770782
chr5 177542272 177542285 SMAD2 JASPAR yes 68108481
chr5 177542272 177542285 SMAD2 JASPAR yes 70770783
chr5 177542276 177542280 NFE TRANSFAC yes 68108482
chr5 177542276 177542280 NFE TRANSFAC yes 70770784
chr5 177542284 177542298 PLAG1 JASPAR yes 68108483
chr5 177542284 177542298 PLAG1 JASPAR yes 70770785
chr5 177542286 177542296 SP1 JASPAR yes 68108484
chr5 177542286 177542296 SP1 JASPAR yes 70770786
chr5 177542294 177542299 SP1 TRANSFAC yes 68108485
chr5 177542294 177542299 SP1 TRANSFAC yes 70770787
chr5 177542308 177542318 SP1 JASPAR yes 68108486
chr5 177542308 177542318 SP1 JASPAR yes 70770788
chr5 177542309 177542317 SP1 TRANSFAC yes 68108487
chr5 177542309 177542317 SP1 TRANSFAC yes 70770789
chr5 177542316 177542330 PLAG1 JASPAR yes 68108488
chr5 177542316 177542330 PLAG1 JASPAR yes 70770790
chr5 177542326 177542347 ZNF263 JASPAR yes 68108489
chr5 177542326 177542347 ZNF263 JASPAR yes 70770791
chr5 177542339 177542355 GLIS1 JASPAR yes 68108490
chr5 177542339 177542355 GLIS1 JASPAR yes 70770792
chr5 177542341 177542351 SP1 JASPAR yes 68108491
chr5 177542341 177542351 ZNF740 JASPAR yes 68108492
chr5 177542341 177542351 SP1 JASPAR yes 70770793
chr5 177542341 177542351 ZNF740 JASPAR yes 70770794
chr5 177542342 177542352 ZNF740 JASPAR yes 68108493
chr5 177542342 177542352 ZNF740 JASPAR yes 70770795
chr5 177542360 177542370 NFKB1 JASPAR yes 68108494
chr5 177542360 177542370 RELA JASPAR yes 68108495
chr5 177542360 177542370 REL JASPAR yes 68108496
chr5 177542360 177542370 NFKB1 JASPAR yes 70770796
chr5 177542360 177542370 RELA JASPAR yes 70770797
chr5 177542360 177542370 REL JASPAR yes 70770798
chr5 177542360 177542371 NFKB1 JASPAR yes 68108497
chr5 177542360 177542371 NFKB1 JASPAR yes 70770799
chr5 177542362 177542372 TEAD4 JASPAR yes 68108498
chr5 177542362 177542372 TEAD4 JASPAR yes 70770800
chr5 177542362 177542374 TEAD1 JASPAR yes 68108499
chr5 177542362 177542374 TEAD1 JASPAR yes 70770801
chr5 177542363 177542371 TEAD3 JASPAR yes 68108500
chr5 177542363 177542371 TEAD3 JASPAR yes 70770802
chr5 177542377 177542382 ETS2 TRANSFAC yes 68108501
chr5 177542377 177542382 ETS2 TRANSFAC yes 70770803
chr5 177542385 177542389 LFA1 TRANSFAC yes 68108502
chr5 177542385 177542389 LFA1 TRANSFAC yes 70770804
chr5 177542386 177542396 NHLH1 JASPAR yes 68108503
chr5 177542386 177542396 NHLH1 JASPAR yes 70770805
chr5 177542399 177542404 SP1 TRANSFAC yes 68108504
chr5 177542399 177542404 SP1 TRANSFAC yes 70770806
chr5 177542420 177542439 CTCF JASPAR yes 68108505
chr5 177542420 177542439 CTCF JASPAR yes 70770807
chr5 177542421 177542436 ZIC3 JASPAR yes 68108506
chr5 177542421 177542436 ZIC4 JASPAR yes 68108507
chr5 177542421 177542436 ZIC3 JASPAR yes 70770808
chr5 177542421 177542436 ZIC4 JASPAR yes 70770809
chr5 177542422 177542436 ZIC1 JASPAR yes 68108508
chr5 177542422 177542436 ZIC1 JASPAR yes 70770810
chr5 177542425 177542434 SNAI2 JASPAR yes 68108509
chr5 177542425 177542434 SNAI2 JASPAR yes 70770811
chr5 177542425 177542435 FIGLA JASPAR yes 68108510
chr5 177542425 177542435 MSC JASPAR yes 68108511
chr5 177542425 177542435 TCF3 JASPAR yes 68108512
chr5 177542425 177542435 FIGLA JASPAR yes 70770812
chr5 177542425 177542435 MSC JASPAR yes 70770813
chr5 177542425 177542435 TCF3 JASPAR yes 70770814
chr5 177542432 177542437 SP1 TRANSFAC yes 68108513
chr5 177542432 177542437 SP1 TRANSFAC yes 70770815
chr5 177542440 177542455 TFAP2A JASPAR yes 68108514
chr5 177542440 177542455 TFAP2A JASPAR yes 70770816
chr5 177542442 177542457 TFAP2A JASPAR yes 68108515
chr5 177542442 177542457 TFAP2C JASPAR yes 68108516
chr5 177542442 177542457 TFAP2A JASPAR yes 70770817
chr5 177542442 177542457 TFAP2C JASPAR yes 70770818
chr5 177542443 177542454 EBF1 JASPAR yes 68108517
chr5 177542443 177542454 EBF1 JASPAR yes 70770819
chr5 177542444 177542453 TFAP2A JASPAR yes 68108518
chr5 177542444 177542453 TFAP2A JASPAR yes 70770820
chr5 177542448 177542453 SP1 TRANSFAC yes 68108519
chr5 177542448 177542453 SP1 TRANSFAC yes 70770821
chr5 177542470 177542489 RFX2 JASPAR yes 68108520
chr5 177542470 177542489 RFX2 JASPAR yes 70770822
chr5 177542482 177542486 LFA1 TRANSFAC yes 68108521
chr5 177542482 177542486 LFA1 TRANSFAC yes 70770823
chr5 177542506 177542511 TFAP2A TRANSFAC yes 68108522
chr5 177542506 177542511 TFAP2A TRANSFAC yes 70770824
chr5 177542506 177542512 MZF1 JASPAR yes 68108523
chr5 177542506 177542512 MZF1 JASPAR yes 70770825
chr5 177542510 177542522 TEAD1 JASPAR yes 68108524
chr5 177542510 177542522 TEAD1 JASPAR yes 70770826
chr5 177542512 177542522 TEAD4 JASPAR yes 68108525
chr5 177542512 177542522 TEAD4 JASPAR yes 70770827
chr5 177542513 177542521 TEAD3 JASPAR yes 68108526
chr5 177542513 177542521 TEAD3 JASPAR yes 70770828
chr5 177542513 177542524 NFKB1 JASPAR yes 68108527
chr5 177542513 177542524 NFKB1 JASPAR yes 70770829
chr5 177542514 177542524 NFKB1 JASPAR yes 68108528
chr5 177542514 177542524 RELA JASPAR yes 68108529
chr5 177542514 177542524 REL JASPAR yes 68108530
chr5 177542514 177542524 NFKB1 JASPAR yes 70770830
chr5 177542514 177542524 RELA JASPAR yes 70770831
chr5 177542514 177542524 REL JASPAR yes 70770832
chr5 177542534 177542550 ZNF143 JASPAR yes 68108531
chr5 177542534 177542550 ZNF143 JASPAR yes 70770833
chr5 177542541 177542549 TBX15 JASPAR yes 68108532
chr5 177542541 177542549 TBX15 JASPAR yes 70770834
chr5 177542542 177542547 SP1 TRANSFAC yes 68108533
chr5 177542542 177542547 SP1 TRANSFAC yes 70770835
chr5 177542562 177542570 OTX2 JASPAR yes 68108534
chr5 177542562 177542570 OTX2 JASPAR yes 70770836
chr5 177542587 177542602 TFAP2C JASPAR yes 68108535
chr5 177542587 177542602 TFAP2C JASPAR yes 70770837
chr5 177542595 177542610 ESR2 JASPAR yes 68108536
chr5 177542595 177542610 ESR2 JASPAR yes 70770838
chr5 177542600 177542613 NR2F1 JASPAR yes 68108537
chr5 177542600 177542613 NR2F1 JASPAR yes 70770839
chr5 177542603 177542611 NR4A2 JASPAR yes 68108538
chr5 177542603 177542611 NR4A2 JASPAR yes 70770840
chr5 177542604 177542618 NR2F1 JASPAR yes 68108539
chr5 177542604 177542618 NR2F1 JASPAR yes 70770841
chr5 177542637 177542652 STAT2 JASPAR yes 68108540
chr5 177542637 177542652 STAT2 JASPAR yes 70770842
chr5 177542642 177542649 SPIB JASPAR yes 68108541
chr5 177542642 177542649 SPIB JASPAR yes 70770843
chr5 177542650 177542659 NKX2-8 JASPAR yes 68108542
chr5 177542650 177542659 NKX2-8 JASPAR yes 70770844
chr5 177542650 177542660 NKX2-3 JASPAR yes 68108543
chr5 177542650 177542660 NKX2-3 JASPAR yes 70770845
SNP sites on vista50326[chr5:177542150-177542670]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 177542348 rs114798194 C A,G,T
GLIS1 SP1 ZNF740
8734468
chr5 177542479 rs145866039 G A
RFX2
8734469
chr5 177542485 rs75573238 G A
LFA1 RFX2
8734470
chr5 177542486 rs567126004 C G
LFA1 RFX2
8734471
chr5 177542517 rs186893394 A C
NFKB1 REL RELA TEAD1 TEAD3 TEAD4
8734472
Genes possibly regulated by vista50326[chr5:177542150-177542670]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 177540444 177553088 + N4BP3 ENSG00000145911.5 177540444 0.79 0.99 6045 98294
chr5 177557997 177577566 + RMND5B ENSG00000145916.14 177557997 0.61 1.0 6046 84673
chr5 177576461 177580968 - NHP2 ENSG00000145912.4 177580968 0.83 0.99 6047 61702
chr5 177631508 177638164 + HNRNPAB ENSG00000197451.6 177631508 0.66 0.99 6048 11162
Expression level of Genes
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miRNAs possibly regulated by vista50326[chr5:177542150-177542670]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results