EnhancerDB
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  3. vista50330[chr5:177645477-177646261]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50330[chr5:177645477-177646261]
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Tissue distribution of vista50330
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Transcription factor that possibly regulate vista50330[chr5:177645477-177646261]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 177645556 177645569 SMAD2 JASPAR yes 70771061
chr5 177645560 177645564 NFE TRANSFAC yes 70771062
chr5 177645567 177645580 ELF1 JASPAR yes 70771063
chr5 177645568 177645578 ELK1 JASPAR yes 70771064
chr5 177645568 177645580 EHF JASPAR yes 70771065
chr5 177645568 177645580 ELF1 JASPAR yes 70771066
chr5 177645568 177645580 ELF4 JASPAR yes 70771067
chr5 177645568 177645581 ELF3 JASPAR yes 70771068
chr5 177645569 177645580 ELF5 JASPAR yes 70771069
chr5 177645570 177645580 GABPA JASPAR yes 70771070
chr5 177645570 177645581 ELK4 JASPAR yes 70771071
chr5 177645572 177645578 ETS1 JASPAR yes 70771072
chr5 177645572 177645578 SPI1 JASPAR yes 70771073
chr5 177645601 177645612 GCM1 JASPAR yes 70771074
chr5 177645635 177645650 AR JASPAR yes 70771075
chr5 177645650 177645661 FOXP2 JASPAR yes 70771076
chr5 177645656 177645660 TEAD2 TRANSFAC yes 70771077
chr5 177645658 177645661 MYB TRANSFAC yes 70771078
chr5 177645677 177645681 YY1 TRANSFAC yes 70771079
chr5 177645679 177645685 TCF4 TRANSFAC yes 70771080
chr5 177645717 177645720 MYB TRANSFAC yes 70771081
chr5 177645740 177645758 NR3C1 JASPAR yes 70771082
chr5 177645752 177645764 E2F8 JASPAR yes 70771083
chr5 177645753 177645769 ZNF143 JASPAR yes 70771084
chr5 177645756 177645776 RREB1 JASPAR yes 70771085
chr5 177645761 177645767 HiNF-A TRANSFAC yes 70771086
chr5 177645775 177645781 YY1 JASPAR yes 70771087
chr5 177645797 177645811 TCF7L2 JASPAR yes 70771088
chr5 177645801 177645807 TCF1 TRANSFAC yes 70771089
chr5 177645819 177645823 H1TF2 TRANSFAC yes 70771090
chr5 177645819 177645823 NFE TRANSFAC yes 70771091
chr5 177645819 177645823 SRF TRANSFAC yes 70771092
chr5 177645824 177645836 POU2F1 JASPAR yes 70771093
chr5 177645824 177645837 POU3F3 JASPAR yes 70771094
chr5 177645824 177645838 POU1F1 JASPAR yes 70771095
chr5 177645825 177645837 POU3F1 JASPAR yes 70771096
chr5 177645825 177645837 POU3F2 JASPAR yes 70771097
chr5 177645825 177645838 POU2F2 JASPAR yes 70771098
chr5 177645826 177645834 FOXL1 JASPAR yes 70771099
chr5 177645826 177645835 POU5F1B JASPAR yes 70771100
chr5 177645826 177645847 IRF1 JASPAR yes 70771101
chr5 177645840 177645858 NR3C1 JASPAR yes 70771102
chr5 177645848 177645852 YY1 TRANSFAC yes 70771103
chr5 177645848 177645859 CEBPB JASPAR yes 70771104
chr5 177645849 177645860 CEBPA JASPAR yes 70771105
chr5 177645854 177645858 H1TF2 TRANSFAC yes 70771106
chr5 177645854 177645858 NFE TRANSFAC yes 70771107
chr5 177645854 177645858 SRF TRANSFAC yes 70771108
chr5 177645865 177645869 TEAD2 TRANSFAC yes 70771109
chr5 177645866 177645886 PPARG JASPAR yes 70771110
chr5 177645868 177645885 ESR1 JASPAR yes 70771111
chr5 177645902 177645906 TEAD2 TRANSFAC yes 70771112
chr5 177645925 177645929 YY1 TRANSFAC yes 70771113
chr5 177645932 177645947 FOXP1 JASPAR yes 70771114
chr5 177645935 177645946 FOXP2 JASPAR yes 70771115
chr5 177645936 177645944 FOXO3 JASPAR yes 70771116
chr5 177645947 177645959 PROX1 JASPAR yes 70771117
chr5 177645957 177645972 FOXP1 JASPAR yes 70771118
chr5 177645962 177645977 FOXP1 JASPAR yes 70771119
chr5 177645977 177645992 FOXP1 JASPAR yes 70771120
chr5 177645979 177645984 ETS2 TRANSFAC yes 70771121
chr5 177645981 177645989 FOXO3 JASPAR yes 70771122
chr5 177646005 177646011 SOX10 JASPAR yes 70771123
chr5 177646013 177646023 ALX3 JASPAR yes 70771124
chr5 177646014 177646022 BSX JASPAR yes 70771125
chr5 177646014 177646022 DLX6 JASPAR yes 70771126
chr5 177646014 177646022 MSX1 JASPAR yes 70771127
chr5 177646014 177646022 MSX2 JASPAR yes 70771128
chr5 177646015 177646026 PHOX2A JASPAR yes 70771129
chr5 177646015 177646026 PROP1 JASPAR yes 70771130
chr5 177646025 177646036 FOSL1 JASPAR yes 70771131
chr5 177646026 177646040 JUN JASPAR yes 70771132
chr5 177646039 177646054 MEF2C JASPAR yes 70771133
chr5 177646040 177646055 MEF2A JASPAR yes 70771134
chr5 177646059 177646069 GSC JASPAR yes 70771135
chr5 177646060 177646068 RHOXF1 JASPAR yes 70771136
chr5 177646060 177646069 PITX3 JASPAR yes 70771137
chr5 177646103 177646114 ETV2 JASPAR yes 70771138
chr5 177646104 177646111 SPIB JASPAR yes 70771139
chr5 177646124 177646128 YY1 TRANSFAC yes 70771140
chr5 177646125 177646136 HOXA10 JASPAR yes 70771141
chr5 177646126 177646137 CDX2 JASPAR yes 70771142
chr5 177646129 177646133 TEAD2 TRANSFAC yes 70771143
chr5 177646131 177646134 MYB TRANSFAC yes 70771144
chr5 177646155 177646164 SRY JASPAR yes 70771145
chr5 177646164 177646177 POU2F2 JASPAR yes 70771146
chr5 177646174 177646179 MYC TRANSFAC yes 70771147
chr5 177646181 177646185 TEAD2 TRANSFAC yes 70771148
chr5 177646181 177646186 TBP TRANSFAC yes 70771149
chr5 177646181 177646187 TFIID TRANSFAC yes 70771150
chr5 177646191 177646205 GATA2 JASPAR yes 70771151
chr5 177646193 177646199 GATA1 TRANSFAC yes 70771152
chr5 177646193 177646201 GATA5 JASPAR yes 70771153
chr5 177646209 177646224 HNF1A JASPAR yes 70771154
chr5 177646210 177646223 HNF1B JASPAR yes 70771155
chr5 177646225 177646236 FOXB1 JASPAR yes 70771156
chr5 177646225 177646236 FOXC1 JASPAR yes 70771157
chr5 177646226 177646236 MEF2A JASPAR yes 70771158
chr5 177646227 177646231 TEAD2 TRANSFAC yes 70771159
chr5 177646227 177646232 TBP TRANSFAC yes 70771160
chr5 177646227 177646233 TMF TRANSFAC yes 70771161
chr5 177646231 177646243 POU2F1 JASPAR yes 70771162
chr5 177646233 177646241 FOXL1 JASPAR yes 70771163
chr5 177646248 177646260 GRHL1 JASPAR yes 70771164
SNP sites on vista50330[chr5:177645477-177646261]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 177645574 rs58591737 G A
EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK4 ETS1 GABPA SPI1
8735180
chr5 177645638 rs191676599 G C
AR
8735181
chr5 177646113 rs148928527 CATAA C
ETV2
8735182
chr5 177646225 rs6859201 C T
FOXB1 FOXC1
8735183
chr5 177646228 rs576773870 T C
FOXB1 FOXC1 MEF2A TBP TEAD2 TMF
8735184
chr5 177646230 rs11441619 T TA
FOXB1 FOXC1 MEF2A TBP TEAD2 TMF
8735185
chr5 177646230 rs143631962 T TA
FOXB1 FOXC1 MEF2A TBP TEAD2 TMF
8735186
Genes possibly regulated by vista50330[chr5:177645477-177646261]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 177557997 177577566 + RMND5B ENSG00000145916.14 177557997 0.61 1.0 6046 12520
chr5 177576461 177580968 - NHP2 ENSG00000145912.4 177580968 0.83 0.99 6047 35491
chr5 177631508 177638164 + HNRNPAB ENSG00000197451.6 177631508 0.66 0.99 6048 86031
chr5 177635498 177659792 - PHYKPL ENSG00000175309.10 177659792 0.75 1.0 6049 86469
Expression level of Genes
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miRNAs possibly regulated by vista50330[chr5:177645477-177646261]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results