EnhancerDB
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  3. vista50339[chr5:177812572-177812778]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50339[chr5:177812572-177812778]
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Tissue distribution of vista50339
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Transcription factor that possibly regulate vista50339[chr5:177812572-177812778]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 177812594 177812601 SPI1 JASPAR yes 70771598
chr5 177812600 177812621 ZNF263 JASPAR yes 70771599
chr5 177812611 177812621 SP1 JASPAR yes 70771600
chr5 177812613 177812625 E2F8 JASPAR yes 70771601
chr5 177812647 177812651 NFE TRANSFAC yes 70771602
chr5 177812651 177812663 HINFP JASPAR yes 70771603
chr5 177812653 177812663 HINFP JASPAR yes 70771604
chr5 177812661 177812672 DUX4 JASPAR yes 70771605
chr5 177812677 177812695 TP53 JASPAR yes 70771606
chr5 177812677 177812695 TP63 JASPAR yes 70771607
chr5 177812690 177812705 FOXA1 JASPAR yes 70771608
chr5 177812692 177812704 FOXC2 JASPAR yes 70771609
chr5 177812693 177812704 BATF JASPAR yes 70771610
chr5 177812693 177812704 FOXB1 JASPAR yes 70771611
chr5 177812693 177812704 FOXC1 JASPAR yes 70771612
chr5 177812694 177812705 FOSL2 JASPAR yes 70771613
chr5 177812694 177812705 FOXA1 JASPAR yes 70771614
chr5 177812695 177812706 FOSL1 JASPAR yes 70771615
chr5 177812696 177812707 JUNB JASPAR yes 70771616
chr5 177812696 177812709 SMAD2 JASPAR yes 70771617
chr5 177812699 177812709 TBR1 JASPAR yes 70771618
chr5 177812699 177812710 TBX2 JASPAR yes 70771619
chr5 177812700 177812710 TBX21 JASPAR yes 70771620
chr5 177812701 177812709 MGA JASPAR yes 70771621
chr5 177812701 177812709 TBX15 JASPAR yes 70771622
chr5 177812701 177812709 TBX1 JASPAR yes 70771623
chr5 177812701 177812709 TBX4 JASPAR yes 70771624
chr5 177812701 177812709 TBX5 JASPAR yes 70771625
chr5 177812701 177812710 ZEB1 JASPAR yes 70771626
chr5 177812701 177812714 ZBTB18 JASPAR yes 70771627
chr5 177812702 177812712 ID4 JASPAR yes 70771628
chr5 177812702 177812712 TCF3 JASPAR yes 70771629
chr5 177812702 177812712 TCF4 JASPAR yes 70771630
chr5 177812704 177812709 USF2 TRANSFAC yes 70771631
chr5 177812726 177812731 ATF1 TRANSFAC yes 70771632
chr5 177812733 177812743 REL JASPAR yes 70771633
chr5 177812741 177812745 H1TF2 TRANSFAC yes 70771634
chr5 177812741 177812745 NFE TRANSFAC yes 70771635
chr5 177812741 177812745 SRF TRANSFAC yes 70771636
SNP sites on vista50339[chr5:177812572-177812778]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 177812584 rs72822856 G A no 8736967
chr5 177812611 rs62389383 G A
SP1 ZNF263
8736968
chr5 177812641 rs2973733 T C no 8736969
chr5 177812695 rs576397884 T C
BATF FOSL1 FOSL2 FOXA1 FOXB1 FOXC1 FOXC2 TP53 TP63
8736970
chr5 177812705 rs138048576 C T
FOSL1 FOSL2 FOXA1 ID4 JUNB MGA SMAD2 TBR1 TBX1 TBX15 TBX2 TBX21 TBX4 TBX5 TCF3 TCF4 USF2 ZBTB18 ZEB1
8736971
Genes possibly regulated by vista50339[chr5:177812572-177812778]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista50339[chr5:177812572-177812778]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results