EnhancerDB
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  3. vista50342[chr5:177832172-177832288]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50342[chr5:177832172-177832288]
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Tissue distribution of vista50342
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Transcription factor that possibly regulate vista50342[chr5:177832172-177832288]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 177832176 177832191 FOXA1 JASPAR yes 68127385
chr5 177832176 177832191 FOXA1 JASPAR yes 70771704
chr5 177832177 177832192 FOXP1 JASPAR yes 68127386
chr5 177832177 177832192 FOXP1 JASPAR yes 70771705
chr5 177832180 177832191 FOXA1 JASPAR yes 68127387
chr5 177832180 177832191 FOXA1 JASPAR yes 70771706
chr5 177832190 177832195 ETS2 TRANSFAC yes 68127388
chr5 177832190 177832195 ETS2 TRANSFAC yes 70771707
chr5 177832200 177832205 GATA2 JASPAR yes 68127389
chr5 177832200 177832205 GATA2 JASPAR yes 70771708
chr5 177832203 177832218 RUNX2 JASPAR yes 68127390
chr5 177832203 177832218 RUNX2 JASPAR yes 70771709
chr5 177832204 177832213 RUNX2 JASPAR yes 68127391
chr5 177832204 177832213 RUNX2 JASPAR yes 70771710
chr5 177832204 177832214 RUNX3 JASPAR yes 68127392
chr5 177832204 177832214 RUNX3 JASPAR yes 70771711
chr5 177832222 177832240 ESR1 JASPAR yes 68127393
chr5 177832222 177832240 ESR1 JASPAR yes 70771712
chr5 177832235 177832253 RARA JASPAR yes 68127394
chr5 177832235 177832253 RARA JASPAR yes 70771713
chr5 177832238 177832243 ATF1 TRANSFAC yes 68127395
chr5 177832238 177832243 ATF1 TRANSFAC yes 70771714
chr5 177832254 177832268 JUN JASPAR yes 68127396
chr5 177832254 177832268 JUN JASPAR yes 70771715
chr5 177832257 177832268 FOSL2 JASPAR yes 68127397
chr5 177832257 177832268 JUNB JASPAR yes 68127398
chr5 177832257 177832268 FOSL2 JASPAR yes 70771716
chr5 177832257 177832268 JUNB JASPAR yes 70771717
chr5 177832258 177832269 FOS JASPAR yes 68127399
chr5 177832258 177832269 FOSL1 JASPAR yes 68127400
chr5 177832258 177832269 JUND JASPAR yes 68127401
chr5 177832258 177832269 FOS JASPAR yes 70771718
chr5 177832258 177832269 FOSL1 JASPAR yes 70771719
chr5 177832258 177832269 JUND JASPAR yes 70771720
chr5 177832259 177832273 JUN JASPAR yes 68127402
chr5 177832259 177832273 JUN JASPAR yes 70771721
chr5 177832260 177832267 JUN TRANSFAC yes 68127403
chr5 177832260 177832267 JUN TRANSFAC yes 70771722
chr5 177832260 177832271 BATF JASPAR yes 68127404
chr5 177832260 177832271 BATF JASPAR yes 70771723
chr5 177832264 177832282 NR3C1 JASPAR yes 68127405
chr5 177832264 177832282 NR3C1 JASPAR yes 70771724
SNP sites on vista50342[chr5:177832172-177832288]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 177832188 rs144570233 T C
FOXA1 FOXP1
8737185
chr5 177832217 rs148533627 G A
RUNX2
8737186
Genes possibly regulated by vista50342[chr5:177832172-177832288]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista50342[chr5:177832172-177832288]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results