EnhancerDB
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  3. vista50354[chr5:178257722-178258121]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50354[chr5:178257722-178258121]
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Tissue distribution of vista50354
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Transcription factor that possibly regulate vista50354[chr5:178257722-178258121]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 178258053 178258397 CTCF UCSC Txn Factor no Conserved 108537751
chr5 178257726 178257745 CTCF JASPAR yes 70772242
chr5 178257736 178257743 CEBPA TRANSFAC yes 70772243
chr5 178257741 178257745 LFA1 TRANSFAC yes 70772244
chr5 178257746 178257757 EBF1 JASPAR yes 70772245
chr5 178257782 178257798 RFX2 JASPAR yes 70772246
chr5 178257783 178257802 RFX2 JASPAR yes 70772247
chr5 178257801 178257814 SMAD2 JASPAR yes 70772248
chr5 178257805 178257809 NFE TRANSFAC yes 70772249
chr5 178257874 178257895 ZNF263 JASPAR yes 68151594
chr5 178257874 178257895 ZNF263 JASPAR yes 70772250
chr5 178257880 178257901 ZNF263 JASPAR yes 68151595
chr5 178257880 178257901 ZNF263 JASPAR yes 70772251
chr5 178257882 178257892 MZF1 JASPAR yes 68151596
chr5 178257882 178257892 MZF1 JASPAR yes 70772252
chr5 178257882 178257894 INSM1 JASPAR yes 68151597
chr5 178257882 178257894 INSM1 JASPAR yes 70772253
chr5 178257921 178257925 YY1 TRANSFAC yes 68151598
chr5 178257921 178257925 YY1 TRANSFAC yes 70772254
chr5 178257952 178257960 MEIS2 JASPAR yes 68151599
chr5 178257952 178257960 MEIS3 JASPAR yes 68151600
chr5 178257952 178257960 MEIS2 JASPAR yes 70772255
chr5 178257952 178257960 MEIS3 JASPAR yes 70772256
chr5 178257953 178257957 NFE TRANSFAC yes 68151601
chr5 178257953 178257957 NFE TRANSFAC yes 70772257
chr5 178257965 178257971 ZNF354C JASPAR yes 68151602
chr5 178257965 178257971 ZNF354C JASPAR yes 70772258
chr5 178257993 178258003 FIGLA JASPAR yes 68151603
chr5 178257993 178258003 FIGLA JASPAR yes 70772259
chr5 178257995 178258000 USF2 TRANSFAC yes 68151604
chr5 178257995 178258000 USF2 TRANSFAC yes 70772260
chr5 178258051 178258055 NFE TRANSFAC yes 68151605
chr5 178258051 178258055 NFE TRANSFAC yes 70772261
chr5 178258060 178258069 RUNX2 JASPAR yes 68151606
chr5 178258060 178258069 RUNX2 JASPAR yes 70772262
chr5 178258061 178258075 ZIC1 JASPAR yes 68151607
chr5 178258061 178258075 ZIC1 JASPAR yes 70772263
chr5 178258087 178258101 MTF1 JASPAR yes 68151608
chr5 178258087 178258101 MTF1 JASPAR yes 70772264
chr5 178258089 178258095 YY1 JASPAR yes 68151609
chr5 178258089 178258095 YY1 JASPAR yes 70772265
SNP sites on vista50354[chr5:178257722-178258121]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 178257804 rs35070400 G A
SMAD2
8740242
chr5 178257859 rs4073864 A G no 8740243
chr5 178257936 rs13163348 C T no 8740244
chr5 178257972 rs144809319 C T no 8740245
chr5 178257973 rs114511447 G A,C no 8740246
chr5 178258034 rs539966046 G A no 8740247
chr5 178258035 rs569265747 A C no 8740248
chr5 178258052 rs4073865 C T
NFE
8740249
chr5 178258057 rs60640007 G A
CTCF
8740250
chr5 178258113 rs13183235 A G
CTCF
8740251
Genes possibly regulated by vista50354[chr5:178257722-178258121]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 178286954 178315123 + ZNF354B ENSG00000178338.6 178286954 0.69 0.98 6053 71167
chr5 178322895 178360213 + ZFP2 ENSG00000198939.3 178322895 0.74 1.0 6054 35226
Expression level of Genes
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miRNAs possibly regulated by vista50354[chr5:178257722-178258121]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results