EnhancerDB
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  3. vista5036[chr1:213088240-213088359]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5036[chr1:213088240-213088359]
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Tissue distribution of vista5036
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Transcription factor that possibly regulate vista5036[chr1:213088240-213088359]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 213088250 213088254 YY1 TRANSFAC yes 35154257
chr1 213088250 213088254 YY1 TRANSFAC yes 118455554
chr1 213088253 213088264 FOXH1 JASPAR yes 35154258
chr1 213088253 213088264 FOXH1 JASPAR yes 118455555
chr1 213088262 213088274 HES5 JASPAR yes 35154259
chr1 213088262 213088274 HES7 JASPAR yes 35154260
chr1 213088262 213088274 HES5 JASPAR yes 118455556
chr1 213088262 213088274 HES7 JASPAR yes 118455557
chr1 213088267 213088276 NFIX JASPAR yes 35154261
chr1 213088267 213088276 NFIX JASPAR yes 118455558
chr1 213088267 213088277 NFIA JASPAR yes 35154262
chr1 213088267 213088277 NFIA JASPAR yes 118455559
chr1 213088269 213088275 NFIC JASPAR yes 35154263
chr1 213088269 213088275 NFIC JASPAR yes 118455560
chr1 213088284 213088298 POU1F1 JASPAR yes 35154264
chr1 213088284 213088298 POU1F1 JASPAR yes 118455561
chr1 213088285 213088297 POU3F2 JASPAR yes 35154265
chr1 213088285 213088297 POU3F2 JASPAR yes 118455562
chr1 213088285 213088298 POU2F2 JASPAR yes 35154266
chr1 213088285 213088298 POU2F2 JASPAR yes 118455563
chr1 213088302 213088316 PLAG1 JASPAR yes 35154267
chr1 213088302 213088316 PLAG1 JASPAR yes 118455564
chr1 213088302 213088317 ZIC3 JASPAR yes 35154268
chr1 213088302 213088317 ZIC4 JASPAR yes 35154269
chr1 213088302 213088317 ZIC3 JASPAR yes 118455565
chr1 213088302 213088317 ZIC4 JASPAR yes 118455566
chr1 213088303 213088314 EBF1 JASPAR yes 35154270
chr1 213088303 213088314 TFAP2A JASPAR yes 35154271
chr1 213088303 213088314 TFAP2B JASPAR yes 35154272
chr1 213088303 213088314 EBF1 JASPAR yes 118455567
chr1 213088303 213088314 TFAP2A JASPAR yes 118455568
chr1 213088303 213088314 TFAP2B JASPAR yes 118455569
chr1 213088303 213088315 TFAP2A JASPAR yes 35154273
chr1 213088303 213088315 TFAP2B JASPAR yes 35154274
chr1 213088303 213088315 TFAP2C JASPAR yes 35154275
chr1 213088303 213088315 TFAP2A JASPAR yes 118455570
chr1 213088303 213088315 TFAP2B JASPAR yes 118455571
chr1 213088303 213088315 TFAP2C JASPAR yes 118455572
chr1 213088303 213088316 TFAP2A JASPAR yes 35154276
chr1 213088303 213088316 TFAP2B JASPAR yes 35154277
chr1 213088303 213088316 TFAP2C JASPAR yes 35154278
chr1 213088303 213088316 TFAP2A JASPAR yes 118455573
chr1 213088303 213088316 TFAP2B JASPAR yes 118455574
chr1 213088303 213088316 TFAP2C JASPAR yes 118455575
chr1 213088303 213088317 EBF1 JASPAR yes 35154279
chr1 213088303 213088317 ZIC1 JASPAR yes 35154280
chr1 213088303 213088317 EBF1 JASPAR yes 118455576
chr1 213088303 213088317 ZIC1 JASPAR yes 118455577
chr1 213088304 213088313 TFAP2A JASPAR yes 35154281
chr1 213088304 213088313 TFAP2A JASPAR yes 118455578
chr1 213088305 213088316 EBF1 JASPAR yes 35154282
chr1 213088305 213088316 EBF1 JASPAR yes 118455579
chr1 213088309 213088329 PPARG JASPAR yes 35154283
chr1 213088309 213088329 PPARG JASPAR yes 118455580
chr1 213088313 213088317 LFA1 TRANSFAC yes 35154284
chr1 213088313 213088317 LFA1 TRANSFAC yes 118455581
chr1 213088316 213088335 CTCF JASPAR yes 35154285
chr1 213088316 213088335 CTCF JASPAR yes 118455582
chr1 213088339 213088359 TP63 JASPAR yes 35154286
chr1 213088339 213088359 TP63 JASPAR yes 118455583
chr1 213088340 213088358 TP53 JASPAR yes 35154287
chr1 213088340 213088358 TP53 JASPAR yes 118455584
SNP sites on vista5036[chr1:213088240-213088359]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 213088300 rs79187347 T C no 926130
Genes possibly regulated by vista5036[chr1:213088240-213088359]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 213003483 213020991 - C1orf227 ENSG00000185523.6 213020991 0.81 0.9 1833 32751
chr1 213031597 213072705 + FLVCR1 ENSG00000162769.8 213031597 0.79 1.0 1834 43357
chr1 213123862 213165379 + VASH2 ENSG00000143494.11 213123862 0.87 0.99 1835 64497
Expression level of Genes
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miRNAs possibly regulated by vista5036[chr1:213088240-213088359]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results