EnhancerDB
  1. Home
  2. Enhancers
  3. vista50364[chr5:178741194-178741503]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50364[chr5:178741194-178741503]
Back to top
Tissue distribution of vista50364
Back to top
Transcription factor that possibly regulate vista50364[chr5:178741194-178741503]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 178741174 178741195 REST JASPAR yes 68168636
chr5 178741174 178741195 REST JASPAR yes 70772769
chr5 178741175 178741194 REST JASPAR yes 68168637
chr5 178741175 178741194 REST JASPAR yes 70772770
chr5 178741194 178741204 REL JASPAR yes 68168638
chr5 178741194 178741204 REL JASPAR yes 70772771
chr5 178741194 178741205 NFKB1 JASPAR yes 68168639
chr5 178741194 178741205 NFKB1 JASPAR yes 70772772
chr5 178741197 178741201 YY1 TRANSFAC yes 68168640
chr5 178741197 178741201 YY1 TRANSFAC yes 70772773
chr5 178741198 178741206 FEV JASPAR yes 68168641
chr5 178741198 178741206 FEV JASPAR yes 70772774
chr5 178741213 178741217 H4TF2 TRANSFAC yes 68168642
chr5 178741213 178741217 H4TF2 TRANSFAC yes 70772775
chr5 178741222 178741228 NFE2 TRANSFAC yes 68168643
chr5 178741222 178741228 NFE2 TRANSFAC yes 70772776
chr5 178741225 178741231 SP1 TRANSFAC yes 68168644
chr5 178741225 178741231 SP1 TRANSFAC yes 70772777
chr5 178741225 178741235 SP1 JASPAR yes 68168645
chr5 178741225 178741235 ZNF740 JASPAR yes 68168646
chr5 178741225 178741235 SP1 JASPAR yes 70772778
chr5 178741225 178741235 ZNF740 JASPAR yes 70772779
chr5 178741245 178741249 NFE TRANSFAC yes 68168647
chr5 178741245 178741249 NFE TRANSFAC yes 70772780
chr5 178741267 178741280 NFKB1 JASPAR yes 68168648
chr5 178741267 178741280 NFKB2 JASPAR yes 68168649
chr5 178741267 178741280 NFKB1 JASPAR yes 70772781
chr5 178741267 178741280 NFKB2 JASPAR yes 70772782
chr5 178741269 178741274 ETS2 TRANSFAC yes 68168650
chr5 178741269 178741274 ETS2 TRANSFAC yes 70772783
chr5 178741287 178741293 YY1 JASPAR yes 68168651
chr5 178741287 178741293 YY1 JASPAR yes 70772784
chr5 178741318 178741331 SMAD2 JASPAR yes 68168652
chr5 178741318 178741331 SMAD2 JASPAR yes 70772785
chr5 178741322 178741336 CREB3 JASPAR yes 68168653
chr5 178741322 178741336 CREB3L1 JASPAR yes 68168654
chr5 178741322 178741336 CREB3 JASPAR yes 70772786
chr5 178741322 178741336 CREB3L1 JASPAR yes 70772787
chr5 178741344 178741349 SP1 TRANSFAC yes 68168655
chr5 178741344 178741349 SP1 TRANSFAC yes 70772788
chr5 178741390 178741401 E2F1 JASPAR yes 68168656
chr5 178741390 178741401 E2F1 JASPAR yes 70772789
chr5 178741411 178741417 MZF1 JASPAR yes 68168657
chr5 178741411 178741417 MZF1 JASPAR yes 70772790
chr5 178741413 178741427 ZIC1 JASPAR yes 68168658
chr5 178741413 178741427 ZIC1 JASPAR yes 70772791
chr5 178741413 178741428 ZIC3 JASPAR yes 68168659
chr5 178741413 178741428 ZIC4 JASPAR yes 68168660
chr5 178741413 178741428 ZIC3 JASPAR yes 70772792
chr5 178741413 178741428 ZIC4 JASPAR yes 70772793
chr5 178741487 178741492 MYC TRANSFAC yes 68168661
chr5 178741487 178741492 MYC TRANSFAC yes 70772794
SNP sites on vista50364[chr5:178741194-178741503]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 178741248 rs542783849 GT G
NFE
8743234
chr5 178741352 rs114501319 C T no 8743235
chr5 178741383 rs11745264 G A no 8743236
chr5 178741408 rs112639528 C T no 8743237
chr5 178741420 rs145323290 CCGTGG C
ZIC1 ZIC3 ZIC4
8743238
chr5 178741420 rs373885376 CCGTGG C
ZIC1 ZIC3 ZIC4
8743239
chr5 178741420 rs558489230 C CCGTGG
ZIC1 ZIC3 ZIC4
8743240
chr5 178741420 rs982858591 C CCGTGG
ZIC1 ZIC3 ZIC4
8743241
chr5 178741442 rs574680081 C T no 8743242
chr5 178741453 rs398093919 G GT no 8743243
chr5 178741453 rs77037744 G GT no 8743244
Genes possibly regulated by vista50364[chr5:178741194-178741503]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 178537852 178772431 - ADAMTS2 ENSG00000087116.9 178772431 0.81 1.0 6059 69072
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50364[chr5:178741194-178741503]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results