EnhancerDB
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  3. vista50365[chr5:178800289-178800431]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50365[chr5:178800289-178800431]
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Tissue distribution of vista50365
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Transcription factor that possibly regulate vista50365[chr5:178800289-178800431]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 178800299 178800305 SP1 TRANSFAC yes 68173153
chr5 178800299 178800305 SP1 TRANSFAC yes 70772795
chr5 178800300 178800305 SP1 TRANSFAC yes 68173154
chr5 178800300 178800305 SP1 TRANSFAC yes 70772796
chr5 178800304 178800316 PKNOX1 JASPAR yes 68173155
chr5 178800304 178800316 TGIF1 JASPAR yes 68173156
chr5 178800304 178800316 TGIF2 JASPAR yes 68173157
chr5 178800304 178800316 PKNOX1 JASPAR yes 70772797
chr5 178800304 178800316 TGIF1 JASPAR yes 70772798
chr5 178800304 178800316 TGIF2 JASPAR yes 70772799
chr5 178800309 178800317 MEIS2 JASPAR yes 68173158
chr5 178800309 178800317 MEIS3 JASPAR yes 68173159
chr5 178800309 178800317 MEIS2 JASPAR yes 70772800
chr5 178800309 178800317 MEIS3 JASPAR yes 70772801
chr5 178800310 178800314 NFE TRANSFAC yes 68173160
chr5 178800310 178800314 NFE TRANSFAC yes 70772802
chr5 178800310 178800317 MEIS1 JASPAR yes 68173161
chr5 178800310 178800317 MEIS1 JASPAR yes 70772803
chr5 178800310 178800322 PBX1 JASPAR yes 68173162
chr5 178800310 178800322 PBX1 JASPAR yes 70772804
chr5 178800347 178800352 NFY TRANSFAC yes 68173163
chr5 178800347 178800352 NFY TRANSFAC yes 70772805
chr5 178800365 178800380 NFYB JASPAR yes 68173164
chr5 178800365 178800380 NFYB JASPAR yes 70772806
chr5 178800367 178800383 NFYA JASPAR yes 68173165
chr5 178800367 178800383 NFYA JASPAR yes 70772807
chr5 178800368 178800386 NFYA JASPAR yes 68173166
chr5 178800368 178800386 NFYA JASPAR yes 70772808
chr5 178800372 178800376 H1TF2 TRANSFAC yes 68173167
chr5 178800372 178800376 NFE TRANSFAC yes 68173168
chr5 178800372 178800376 SRF TRANSFAC yes 68173169
chr5 178800372 178800376 H1TF2 TRANSFAC yes 70772809
chr5 178800372 178800376 NFE TRANSFAC yes 70772810
chr5 178800372 178800376 SRF TRANSFAC yes 70772811
chr5 178800386 178800392 MZF1 JASPAR yes 68173170
chr5 178800386 178800392 MZF1 JASPAR yes 70772812
chr5 178800396 178800402 ETS1 JASPAR yes 68173171
chr5 178800396 178800402 ETS1 JASPAR yes 70772813
chr5 178800412 178800427 TFAP2A JASPAR yes 68173172
chr5 178800412 178800427 TFAP2A JASPAR yes 70772814
chr5 178800413 178800424 TFAP2A JASPAR yes 68173173
chr5 178800413 178800424 TFAP2A JASPAR yes 70772815
chr5 178800424 178800428 YY1 TRANSFAC yes 68173174
chr5 178800424 178800428 YY1 TRANSFAC yes 70772816
chr5 178800424 178800434 ETV6 JASPAR yes 68173175
chr5 178800424 178800434 ETV6 JASPAR yes 70772817
chr5 178800424 178800435 ETV2 JASPAR yes 68173176
chr5 178800424 178800435 ETV2 JASPAR yes 70772818
chr5 178800425 178800433 FEV JASPAR yes 68173177
chr5 178800425 178800433 FEV JASPAR yes 70772819
chr5 178800427 178800434 SPIB JASPAR yes 68173178
chr5 178800427 178800434 SPIB JASPAR yes 70772820
SNP sites on vista50365[chr5:178800289-178800431]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 178800291 rs4701110 C G no 8743862
chr5 178800360 rs79445907 G A no 8743863
chr5 178800393 rs118178388 G A no 8743864
Genes possibly regulated by vista50365[chr5:178800289-178800431]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 178537852 178772431 - ADAMTS2 ENSG00000087116.9 178772431 0.81 1.0 6059 72142
Expression level of Genes
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miRNAs possibly regulated by vista50365[chr5:178800289-178800431]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results