EnhancerDB
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  3. vista50366[chr5:178820200-178820548]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50366[chr5:178820200-178820548]
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Tissue distribution of vista50366
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Transcription factor that possibly regulate vista50366[chr5:178820200-178820548]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 178820182 178820369 FOS UCSC Txn Factor no Conserved 108537754
chr5 178820200 178820203 MYB TRANSFAC yes 70772821
chr5 178820203 178820212 SRY JASPAR yes 70772822
chr5 178820205 178820208 MYB TRANSFAC yes 70772823
chr5 178820205 178820221 SOX4 JASPAR yes 70772824
chr5 178820206 178820221 SOX21 JASPAR yes 70772825
chr5 178820212 178820216 YY1 TRANSFAC yes 70772826
chr5 178820214 178820220 TCF4 TRANSFAC yes 70772827
chr5 178820216 178820235 RFX2 JASPAR yes 70772828
chr5 178820220 178820236 RFX5 JASPAR yes 70772829
chr5 178820226 178820238 MYBL1 JASPAR yes 70772830
chr5 178820231 178820234 MYB TRANSFAC yes 70772831
chr5 178820235 178820243 CREB1 JASPAR yes 70772832
chr5 178820238 178820250 NHLH1 JASPAR yes 70772833
chr5 178820239 178820249 NHLH1 JASPAR yes 70772834
chr5 178820273 178820287 JUN JASPAR yes 70772835
chr5 178820275 178820286 BATF JASPAR yes 70772836
chr5 178820276 178820287 FOSL2 JASPAR yes 70772837
chr5 178820276 178820287 JUNB JASPAR yes 70772838
chr5 178820277 178820288 FOS JASPAR yes 70772839
chr5 178820277 178820288 FOSL1 JASPAR yes 70772840
chr5 178820277 178820288 JUND JASPAR yes 70772841
chr5 178820277 178820288 NFE2 JASPAR yes 70772842
chr5 178820278 178820287 JDP2 JASPAR yes 70772843
chr5 178820278 178820289 FOSL2 JASPAR yes 70772844
chr5 178820278 178820289 JUNB JASPAR yes 70772845
chr5 178820278 178820292 JUN JASPAR yes 70772846
chr5 178820280 178820299 PAX5 JASPAR yes 70772847
chr5 178820291 178820305 TCF7L2 JASPAR yes 70772848
chr5 178820302 178820314 NHLH1 JASPAR yes 70772849
chr5 178820303 178820313 NHLH1 JASPAR yes 70772850
chr5 178820319 178820330 NFKB1 JASPAR yes 70772851
chr5 178820320 178820330 RELA JASPAR yes 70772852
chr5 178820320 178820330 REL JASPAR yes 70772853
chr5 178820336 178820340 YY1 TRANSFAC yes 70772854
chr5 178820336 178820347 FOSL1 JASPAR yes 70772855
chr5 178820336 178820347 JUND JASPAR yes 70772856
chr5 178820337 178820348 JUNB JASPAR yes 70772857
chr5 178820337 178820351 JUN JASPAR yes 70772858
chr5 178820340 178820350 MAX JASPAR yes 70772859
chr5 178820340 178820351 USF1 JASPAR yes 70772860
chr5 178820340 178820351 USF2 JASPAR yes 70772861
chr5 178820378 178820392 EBF1 JASPAR yes 70772862
chr5 178820379 178820385 MZF1 JASPAR yes 70772863
chr5 178820379 178820390 EBF1 JASPAR yes 70772864
chr5 178820380 178820391 EBF1 JASPAR yes 70772865
chr5 178820402 178820414 GLI2 JASPAR yes 70772866
chr5 178820402 178820414 ZBTB7C JASPAR yes 70772867
chr5 178820412 178820430 MAFF JASPAR yes 70772868
chr5 178820413 178820428 MAFK JASPAR yes 70772869
chr5 178820448 178820463 PRDM1 JASPAR yes 70772870
chr5 178820448 178820466 IRF2 JASPAR yes 70772871
chr5 178820453 178820467 IRF7 JASPAR yes 70772872
chr5 178820464 178820479 SOX21 JASPAR yes 70772873
chr5 178820464 178820480 SOX4 JASPAR yes 70772874
chr5 178820476 178820488 POU2F1 JASPAR yes 70772875
chr5 178820476 178820489 POU3F3 JASPAR yes 70772876
chr5 178820476 178820490 POU1F1 JASPAR yes 70772877
chr5 178820477 178820489 POU3F1 JASPAR yes 70772878
chr5 178820477 178820489 POU3F2 JASPAR yes 70772879
chr5 178820477 178820490 POU2F2 JASPAR yes 70772880
chr5 178820478 178820486 POU2F1 TRANSFAC yes 70772881
chr5 178820478 178820487 POU3F4 JASPAR yes 70772882
chr5 178820478 178820487 POU5F1B JASPAR yes 70772883
chr5 178820479 178820486 POU2F1 TRANSFAC yes 70772884
chr5 178820479 178820486 POU2F2 TRANSFAC yes 70772885
chr5 178820489 178820508 REST JASPAR yes 70772886
chr5 178820490 178820508 SRF JASPAR yes 70772887
chr5 178820492 178820507 MEF2C JASPAR yes 70772888
chr5 178820493 178820508 MEF2A JASPAR yes 70772889
chr5 178820494 178820506 MEF2B JASPAR yes 70772890
chr5 178820500 178820515 FOXP1 JASPAR yes 70772891
chr5 178820511 178820525 TCF7L2 JASPAR yes 70772892
chr5 178820526 178820529 MYB TRANSFAC yes 70772893
chr5 178820528 178820534 SOX10 JASPAR yes 70772894
chr5 178820536 178820547 NFKB1 JASPAR yes 70772895
SNP sites on vista50366[chr5:178820200-178820548]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 178820237 rs79583630 G T
CREB1 FOS MYBL1
8744031
chr5 178820427 rs185389299 C G
MAFF MAFK
8744032
chr5 178820438 rs117256710 G A no 8744033
chr5 178820458 rs570728 A G
IRF2 IRF7 PRDM1
8744034
chr5 178820466 rs79051176 A T
IRF2 IRF7 SOX21 SOX4
8744035
Genes possibly regulated by vista50366[chr5:178820200-178820548]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 178537852 178772431 - ADAMTS2 ENSG00000087116.9 178772431 0.81 1.0 6059 52231
Expression level of Genes
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miRNAs possibly regulated by vista50366[chr5:178820200-178820548]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results