EnhancerDB
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  3. vista50367[chr5:178985972-178986151]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50367[chr5:178985972-178986151]
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Tissue distribution of vista50367
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Transcription factor that possibly regulate vista50367[chr5:178985972-178986151]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 178985787 178986622 E2F1 UCSC Txn Factor no Conserved 108537755
chr5 178985963 178987021 TAF1 UCSC Txn Factor no Conserved 108537756
chr5 178985990 178986005 FOXP1 JASPAR yes 70772896
chr5 178985991 178986002 FOXA1 JASPAR yes 70772897
chr5 178985991 178986002 FOXH1 JASPAR yes 70772898
chr5 178985992 178986004 FOXC2 JASPAR yes 70772899
chr5 178985993 178986004 FOXP2 JASPAR yes 70772900
chr5 178985994 178986008 SPI1 JASPAR yes 70772901
chr5 178986007 178986011 YY1 TRANSFAC yes 70772902
chr5 178986011 178986014 MYB TRANSFAC yes 70772903
chr5 178986011 178986022 RUNX1 JASPAR yes 70772904
chr5 178986022 178986030 BSX JASPAR yes 70772905
chr5 178986022 178986030 DLX6 JASPAR yes 70772906
chr5 178986022 178986030 MSX1 JASPAR yes 70772907
chr5 178986022 178986030 MSX2 JASPAR yes 70772908
chr5 178986028 178986040 PKNOX2 JASPAR yes 70772909
chr5 178986029 178986039 ID4 JASPAR yes 70772910
chr5 178986037 178986049 IRF1 JASPAR yes 70772911
chr5 178986037 178986052 RUNX2 JASPAR yes 70772912
chr5 178986043 178986052 SRY JASPAR yes 70772913
chr5 178986057 178986066 SP1 TRANSFAC yes 70772914
chr5 178986058 178986064 SP1 TRANSFAC yes 70772915
chr5 178986058 178986068 SP1 JASPAR yes 70772916
chr5 178986059 178986066 SP1 TRANSFAC yes 70772917
chr5 178986060 178986065 SP1 TRANSFAC yes 70772918
chr5 178986060 178986066 SP1 TRANSFAC yes 70772919
chr5 178986060 178986067 SP1 TRANSFAC yes 70772920
chr5 178986071 178986075 H1TF2 TRANSFAC yes 70772921
chr5 178986071 178986075 NFE TRANSFAC yes 70772922
chr5 178986071 178986075 SRF TRANSFAC yes 70772923
chr5 178986073 178986083 NFIA JASPAR yes 70772924
chr5 178986075 178986081 NFIC JASPAR yes 70772925
chr5 178986083 178986087 YY1 TRANSFAC yes 70772926
chr5 178986102 178986113 NRF1 JASPAR yes 70772927
chr5 178986103 178986114 NRF1 JASPAR yes 70772928
chr5 178986104 178986115 NRF1 JASPAR yes 70772929
chr5 178986105 178986116 NRF1 JASPAR yes 70772930
chr5 178986106 178986117 NRF1 JASPAR yes 70772931
chr5 178986108 178986119 NRF1 JASPAR yes 70772932
chr5 178986132 178986142 TBR1 JASPAR yes 70772933
chr5 178986133 178986143 TBX21 JASPAR yes 70772934
chr5 178986134 178986142 TBX15 JASPAR yes 70772935
chr5 178986134 178986142 TBX4 JASPAR yes 70772936
chr5 178986134 178986143 ZEB1 JASPAR yes 70772937
chr5 178986135 178986145 ID4 JASPAR yes 70772938
chr5 178986135 178986145 TCF3 JASPAR yes 70772939
chr5 178986135 178986145 TCF4 JASPAR yes 70772940
chr5 178986137 178986142 USF2 TRANSFAC yes 70772941
SNP sites on vista50367[chr5:178985972-178986151]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 178985994 rs6896940 G C
E2F1 FOXA1 FOXC2 FOXH1 FOXP1 FOXP2 SPI1 TAF1
8745117
Genes possibly regulated by vista50367[chr5:178985972-178986151]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 178977559 179037027 + RUFY1 ENSG00000176783.10 178977559 0.68 0.99 6060 91587
chr5 179041179 179061785 - HNRNPH1 ENSG00000169045.13 179061785 0.84 0.99 6061 24366
chr5 179068545 179072047 - C5orf60 ENSG00000204661.5 179072047 0.97 0.89 6062 14104
chr5 179078298 179079445 + AC136604.1 ENSG00000228259.2 179078298 0.0 0.0 6063 7853
Expression level of Genes
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miRNAs possibly regulated by vista50367[chr5:178985972-178986151]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results