EnhancerDB
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  3. vista50370[chr5:179188972-179189165]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50370[chr5:179188972-179189165]
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Tissue distribution of vista50370
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Transcription factor that possibly regulate vista50370[chr5:179188972-179189165]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179189094 179189313 SPI1 UCSC Txn Factor no Conserved 108537760
chr5 179188963 179188973 GABPA JASPAR yes 68188372
chr5 179188963 179188973 GABPA JASPAR yes 70772981
chr5 179188976 179188997 ZNF263 JASPAR yes 68188373
chr5 179188976 179188997 ZNF263 JASPAR yes 70772982
chr5 179188978 179188993 FOXP1 JASPAR yes 68188374
chr5 179188978 179188993 FOXP1 JASPAR yes 70772983
chr5 179188984 179188990 TBP TRANSFAC yes 68188375
chr5 179188984 179188990 TBP TRANSFAC yes 70772984
chr5 179188986 179189000 SPI1 JASPAR yes 68188376
chr5 179188986 179189000 SPIC JASPAR yes 68188377
chr5 179188986 179189000 SPI1 JASPAR yes 70772985
chr5 179188986 179189000 SPIC JASPAR yes 70772986
chr5 179188987 179189008 ZNF263 JASPAR yes 68188378
chr5 179188987 179189008 ZNF263 JASPAR yes 70772987
chr5 179188990 179189011 ZNF263 JASPAR yes 68188379
chr5 179188990 179189011 ZNF263 JASPAR yes 70772988
chr5 179189000 179189006 PEA3 TRANSFAC yes 68188380
chr5 179189000 179189006 PEA3 TRANSFAC yes 70772989
chr5 179189012 179189023 ELF5 JASPAR yes 68188381
chr5 179189012 179189023 ELF5 JASPAR yes 70772990
chr5 179189013 179189021 FEV JASPAR yes 68188382
chr5 179189013 179189021 FEV JASPAR yes 70772991
chr5 179189039 179189043 LFA1 TRANSFAC yes 68188383
chr5 179189039 179189043 LFA1 TRANSFAC yes 70772992
chr5 179189067 179189081 TCF7L2 JASPAR yes 68188384
chr5 179189067 179189081 TCF7L2 JASPAR yes 70772993
chr5 179189071 179189077 TCF4 TRANSFAC yes 68188385
chr5 179189071 179189077 TCF4 TRANSFAC yes 70772994
chr5 179189093 179189105 NHLH1 JASPAR yes 68188386
chr5 179189093 179189105 NHLH1 JASPAR yes 70772995
chr5 179189094 179189104 MSC JASPAR yes 68188387
chr5 179189094 179189104 NHLH1 JASPAR yes 68188388
chr5 179189094 179189104 TFAP4 JASPAR yes 68188389
chr5 179189094 179189104 MSC JASPAR yes 70772996
chr5 179189094 179189104 NHLH1 JASPAR yes 70772997
chr5 179189094 179189104 TFAP4 JASPAR yes 70772998
chr5 179189101 179189114 SMAD2 JASPAR yes 68188390
chr5 179189101 179189114 SMAD2 JASPAR yes 70772999
chr5 179189105 179189109 NFE TRANSFAC yes 68188391
chr5 179189105 179189109 NFE TRANSFAC yes 70773000
chr5 179189107 179189117 SREBF2 JASPAR yes 68188392
chr5 179189107 179189117 SREBF2 JASPAR yes 70773001
chr5 179189134 179189146 IRF1 JASPAR yes 68188393
chr5 179189134 179189146 IRF1 JASPAR yes 70773002
chr5 179189139 179189143 YY1 TRANSFAC yes 68188394
chr5 179189139 179189143 YY1 TRANSFAC yes 70773003
chr5 179189160 179189166 SOX10 JASPAR yes 68188395
chr5 179189160 179189166 SOX10 JASPAR yes 70773004
chr5 179189161 179189177 ZNF143 JASPAR yes 68188396
chr5 179189161 179189177 ZNF143 JASPAR yes 70773005
SNP sites on vista50370[chr5:179188972-179189165]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179189085 rs77681405 G A no 8746012
Genes possibly regulated by vista50370[chr5:179188972-179189165]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179105584 179107975 - CBY3 ENSG00000204659.4 179107975 0.7 1.0 6064 19003
chr5 179105629 179157926 + CANX ENSG00000127022.10 179105629 0.71 1.0 6065 16657
chr5 179159851 179223512 + MAML1 ENSG00000161021.7 179159851 0.67 1.0 6066 70879
chr5 179220981 179223648 + LTC4S ENSG00000213316.5 179220981 0.97 0.87 6067 68184
chr5 179224597 179233952 - MGAT4B ENSG00000161013.12 179233952 0.76 1.0 6068 55213
chr5 179233388 179265078 + SQSTM1 ENSG00000161011.15 179233388 0.71 1.0 6069 55777
chr5 179286013 179288283 + CTC-241N9.1 ENSG00000245317.2 179286013 0.72 0.99 6071 3152
Expression level of Genes
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miRNAs possibly regulated by vista50370[chr5:179188972-179189165]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results