EnhancerDB
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  3. vista50375[chr5:179399876-179400065]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50375[chr5:179399876-179400065]
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Tissue distribution of vista50375
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Transcription factor that possibly regulate vista50375[chr5:179399876-179400065]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179399875 179399880 ETS2 TRANSFAC yes 68193002
chr5 179399875 179399880 ETS2 TRANSFAC yes 70773165
chr5 179399883 179399891 OTX2 JASPAR yes 68193003
chr5 179399883 179399891 OTX2 JASPAR yes 70773166
chr5 179399886 179399898 FOXC2 JASPAR yes 68193004
chr5 179399886 179399898 FOXC2 JASPAR yes 70773167
chr5 179399886 179399900 ONECUT3 JASPAR yes 68193005
chr5 179399886 179399900 ONECUT3 JASPAR yes 70773168
chr5 179399887 179399898 FOXB1 JASPAR yes 68193006
chr5 179399887 179399898 FOXC1 JASPAR yes 68193007
chr5 179399887 179399898 FOXB1 JASPAR yes 70773169
chr5 179399887 179399898 FOXC1 JASPAR yes 70773170
chr5 179399894 179399898 TEAD2 TRANSFAC yes 68193008
chr5 179399894 179399898 TEAD2 TRANSFAC yes 70773171
chr5 179399894 179399899 TBP TRANSFAC yes 68193009
chr5 179399894 179399899 TBP TRANSFAC yes 70773172
chr5 179399894 179399900 TFIID TRANSFAC yes 68193010
chr5 179399894 179399900 TFIID TRANSFAC yes 70773173
chr5 179399904 179399913 HIC2 JASPAR yes 68193011
chr5 179399904 179399913 HIC2 JASPAR yes 70773174
chr5 179399924 179399933 SRY JASPAR yes 68193012
chr5 179399924 179399933 SRY JASPAR yes 70773175
chr5 179399925 179399935 PAX3 JASPAR yes 68193013
chr5 179399925 179399935 PAX7 JASPAR yes 68193014
chr5 179399925 179399935 PAX3 JASPAR yes 70773176
chr5 179399925 179399935 PAX7 JASPAR yes 70773177
chr5 179399927 179399936 VENTX JASPAR yes 68193015
chr5 179399927 179399936 VENTX JASPAR yes 70773178
chr5 179399927 179399937 GSX2 JASPAR yes 68193016
chr5 179399927 179399937 MNX1 JASPAR yes 68193017
chr5 179399927 179399937 GSX2 JASPAR yes 70773179
chr5 179399927 179399937 MNX1 JASPAR yes 70773180
chr5 179399927 179399938 HOXA10 JASPAR yes 68193018
chr5 179399927 179399938 HOXA10 JASPAR yes 70773181
chr5 179399928 179399936 BARX1 JASPAR yes 68193019
chr5 179399928 179399936 BARX1 JASPAR yes 70773182
chr5 179399965 179399980 FOXP1 JASPAR yes 68193020
chr5 179399965 179399980 FOXP1 JASPAR yes 70773183
chr5 179399966 179399987 IRF1 JASPAR yes 68193021
chr5 179399966 179399987 IRF1 JASPAR yes 70773184
chr5 179399984 179399996 GRHL1 JASPAR yes 68193022
chr5 179399984 179399996 GRHL1 JASPAR yes 70773185
chr5 179399985 179399995 TFCP2 JASPAR yes 68193023
chr5 179399985 179399995 TFCP2 JASPAR yes 70773186
chr5 179399993 179400004 EBF1 JASPAR yes 68193024
chr5 179399993 179400004 EBF1 JASPAR yes 70773187
chr5 179400020 179400028 EHF JASPAR yes 68193025
chr5 179400020 179400028 EHF JASPAR yes 70773188
chr5 179400020 179400038 MAFF JASPAR yes 68193026
chr5 179400020 179400038 MAFF JASPAR yes 70773189
chr5 179400021 179400036 MAFK JASPAR yes 68193027
chr5 179400021 179400036 MAFK JASPAR yes 70773190
chr5 179400032 179400045 POU2F2 JASPAR yes 68193028
chr5 179400032 179400045 POU2F2 JASPAR yes 70773191
chr5 179400044 179400059 MEF2A JASPAR yes 68193029
chr5 179400044 179400059 MEF2A JASPAR yes 70773192
chr5 179400045 179400060 MEF2C JASPAR yes 68193030
chr5 179400045 179400060 MEF2C JASPAR yes 70773193
chr5 179400048 179400052 YY1 TRANSFAC yes 68193031
chr5 179400048 179400052 YY1 TRANSFAC yes 70773194
chr5 179400061 179400067 TBP TRANSFAC yes 68193032
chr5 179400061 179400067 TBP TRANSFAC yes 70773195
SNP sites on vista50375[chr5:179399876-179400065]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179400026 rs114445829 C T
EHF MAFF MAFK
8746658
Genes possibly regulated by vista50375[chr5:179399876-179400065]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179289066 179334859 - TBC1D9B ENSG00000197226.8 179334859 0.67 1.0 6072 34983
chr5 179338651 179499118 - RNF130 ENSG00000113269.9 179499118 0.72 1.0 6073 947
Expression level of Genes
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miRNAs possibly regulated by vista50375[chr5:179399876-179400065]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results