EnhancerDB
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  3. vista50376[chr5:179402324-179402667]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50376[chr5:179402324-179402667]
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Tissue distribution of vista50376
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Transcription factor that possibly regulate vista50376[chr5:179402324-179402667]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179402169 179402599 CTCF UCSC Txn Factor no Conserved 108537762
chr5 179402222 179402504 RAD21 UCSC Txn Factor no Conserved 108537763
chr5 179402340 179402360 TBX19 JASPAR yes 68193284
chr5 179402340 179402360 TBX19 JASPAR yes 70773196
chr5 179402342 179402358 T JASPAR yes 68193285
chr5 179402342 179402358 T JASPAR yes 70773197
chr5 179402354 179402366 GLI2 JASPAR yes 68193286
chr5 179402354 179402366 ZBTB7B JASPAR yes 68193287
chr5 179402354 179402366 ZBTB7C JASPAR yes 68193288
chr5 179402354 179402366 GLI2 JASPAR yes 70773198
chr5 179402354 179402366 ZBTB7B JASPAR yes 70773199
chr5 179402354 179402366 ZBTB7C JASPAR yes 70773200
chr5 179402355 179402367 ZBTB7A JASPAR yes 68193289
chr5 179402355 179402367 ZBTB7A JASPAR yes 70773201
chr5 179402357 179402362 SP1 TRANSFAC yes 68193290
chr5 179402357 179402362 SP1 TRANSFAC yes 70773202
chr5 179402366 179402385 CTCF JASPAR yes 68193291
chr5 179402366 179402385 CTCF JASPAR yes 70773203
chr5 179402367 179402378 TBX2 JASPAR yes 68193292
chr5 179402367 179402378 TBX2 JASPAR yes 70773204
chr5 179402369 179402377 TBX15 JASPAR yes 68193293
chr5 179402369 179402377 TBX1 JASPAR yes 68193294
chr5 179402369 179402377 TBX4 JASPAR yes 68193295
chr5 179402369 179402377 TBX5 JASPAR yes 68193296
chr5 179402369 179402377 TBX15 JASPAR yes 70773205
chr5 179402369 179402377 TBX1 JASPAR yes 70773206
chr5 179402369 179402377 TBX4 JASPAR yes 70773207
chr5 179402369 179402377 TBX5 JASPAR yes 70773208
chr5 179402383 179402404 REST JASPAR yes 68193297
chr5 179402383 179402404 REST JASPAR yes 70773209
chr5 179402390 179402401 ESRRA JASPAR yes 68193298
chr5 179402390 179402401 ESRRA JASPAR yes 70773210
chr5 179402409 179402429 RREB1 JASPAR yes 68193299
chr5 179402409 179402429 RREB1 JASPAR yes 70773211
chr5 179402410 179402420 ZNF740 JASPAR yes 68193300
chr5 179402410 179402420 ZNF740 JASPAR yes 70773212
chr5 179402412 179402422 ZNF740 JASPAR yes 68193301
chr5 179402412 179402422 ZNF740 JASPAR yes 70773213
chr5 179402412 179402426 GLIS2 JASPAR yes 68193302
chr5 179402412 179402426 GLIS2 JASPAR yes 70773214
chr5 179402430 179402434 H4TF2 TRANSFAC yes 68193303
chr5 179402430 179402434 H4TF2 TRANSFAC yes 70773215
chr5 179402436 179402447 FOXA1 JASPAR yes 68193304
chr5 179402436 179402447 FOXA1 JASPAR yes 70773216
chr5 179402436 179402451 FOXA1 JASPAR yes 68193305
chr5 179402436 179402451 FOXA1 JASPAR yes 70773217
chr5 179402437 179402448 FOXB1 JASPAR yes 68193306
chr5 179402437 179402448 FOXC1 JASPAR yes 68193307
chr5 179402437 179402448 FOXB1 JASPAR yes 70773218
chr5 179402437 179402448 FOXC1 JASPAR yes 70773219
chr5 179402437 179402449 FOXC2 JASPAR yes 68193308
chr5 179402437 179402449 FOXC2 JASPAR yes 70773220
chr5 179402446 179402455 NFIX JASPAR yes 68193309
chr5 179402446 179402455 NFIX JASPAR yes 70773221
chr5 179402446 179402456 NFIA JASPAR yes 68193310
chr5 179402446 179402456 NFIA JASPAR yes 70773222
chr5 179402448 179402454 NFIC JASPAR yes 68193311
chr5 179402448 179402454 NFIC JASPAR yes 70773223
chr5 179402459 179402465 HiNF-A TRANSFAC yes 68193312
chr5 179402459 179402465 HiNF-A TRANSFAC yes 70773224
chr5 179402483 179402487 NFE TRANSFAC yes 68193313
chr5 179402483 179402487 NFE TRANSFAC yes 70773225
chr5 179402510 179402525 HNF1A JASPAR yes 68193314
chr5 179402510 179402525 HNF1A JASPAR yes 70773226
chr5 179402522 179402531 ZEB1 JASPAR yes 68193315
chr5 179402522 179402531 ZEB1 JASPAR yes 70773227
chr5 179402523 179402533 FIGLA JASPAR yes 68193316
chr5 179402523 179402533 FIGLA JASPAR yes 70773228
chr5 179402524 179402533 SNAI2 JASPAR yes 68193317
chr5 179402524 179402533 SNAI2 JASPAR yes 70773229
chr5 179402525 179402530 USF2 TRANSFAC yes 68193318
chr5 179402525 179402530 USF2 TRANSFAC yes 70773230
chr5 179402532 179402535 MYB TRANSFAC yes 68193319
chr5 179402532 179402535 MYB TRANSFAC yes 70773231
chr5 179402540 179402544 NFE TRANSFAC yes 68193320
chr5 179402540 179402544 NFE TRANSFAC yes 70773232
chr5 179402596 179402611 PRDM1 JASPAR yes 68193321
chr5 179402596 179402611 PRDM1 JASPAR yes 70773233
chr5 179402614 179402631 PAX1 JASPAR yes 68193322
chr5 179402614 179402631 PAX1 JASPAR yes 70773234
chr5 179402635 179402642 SPIB JASPAR yes 68193323
chr5 179402635 179402642 SPIB JASPAR yes 70773235
chr5 179402655 179402674 RFX2 JASPAR yes 68193324
chr5 179402655 179402674 RFX2 JASPAR yes 70773236
chr5 179402657 179402672 RFX5 JASPAR yes 68193325
chr5 179402657 179402672 RFX5 JASPAR yes 70773237
SNP sites on vista50376[chr5:179402324-179402667]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179402364 rs189610633 C A
CTCF GLI2 RAD21 ZBTB7A ZBTB7B ZBTB7C
8746712
chr5 179402431 rs563210712 G C
CTCF H4TF2 RAD21
8746713
chr5 179402523 rs548935247 C T
CTCF FIGLA HNF1A ZEB1
8746714
Genes possibly regulated by vista50376[chr5:179402324-179402667]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179289066 179334859 - TBC1D9B ENSG00000197226.8 179334859 0.67 1.0 6072 32535
chr5 179338651 179499118 - RNF130 ENSG00000113269.9 179499118 0.72 1.0 6073 3549
Expression level of Genes
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miRNAs possibly regulated by vista50376[chr5:179402324-179402667]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results