EnhancerDB
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  3. vista50382[chr5:179496400-179496705]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50382[chr5:179496400-179496705]
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Tissue distribution of vista50382
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Transcription factor that possibly regulate vista50382[chr5:179496400-179496705]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179496385 179496400 SCRT1 JASPAR yes 68198358
chr5 179496385 179496400 SCRT1 JASPAR yes 70773596
chr5 179496387 179496400 SCRT2 JASPAR yes 68198362
chr5 179496387 179496400 SCRT2 JASPAR yes 70773597
chr5 179496400 179496420 RREB1 JASPAR yes 68198364
chr5 179496400 179496420 RREB1 JASPAR yes 70773598
chr5 179496401 179496421 RREB1 JASPAR yes 68198365
chr5 179496401 179496421 RREB1 JASPAR yes 70773599
chr5 179496402 179496422 RREB1 JASPAR yes 68198366
chr5 179496402 179496422 RREB1 JASPAR yes 70773600
chr5 179496404 179496424 RREB1 JASPAR yes 68198367
chr5 179496404 179496424 RREB1 JASPAR yes 70773601
chr5 179496409 179496419 ZNF740 JASPAR yes 68198368
chr5 179496409 179496419 ZNF740 JASPAR yes 70773602
chr5 179496463 179496477 EBF1 JASPAR yes 68198369
chr5 179496463 179496477 EBF1 JASPAR yes 70773603
chr5 179496464 179496475 EBF1 JASPAR yes 68198370
chr5 179496464 179496475 EBF1 JASPAR yes 70773604
chr5 179496465 179496476 EBF1 JASPAR yes 68198371
chr5 179496465 179496476 EBF1 JASPAR yes 70773605
chr5 179496470 179496491 ZNF263 JASPAR yes 68198372
chr5 179496470 179496491 ZNF263 JASPAR yes 70773606
chr5 179496478 179496483 ETS2 TRANSFAC yes 68198373
chr5 179496478 179496483 ETS2 TRANSFAC yes 70773607
chr5 179496509 179496522 EOMES JASPAR yes 68198374
chr5 179496509 179496522 EOMES JASPAR yes 70773608
chr5 179496511 179496521 TBR1 JASPAR yes 68198375
chr5 179496511 179496521 TBR1 JASPAR yes 70773609
chr5 179496511 179496522 TBX20 JASPAR yes 68198376
chr5 179496511 179496522 TBX2 JASPAR yes 68198377
chr5 179496511 179496522 TBX20 JASPAR yes 70773610
chr5 179496511 179496522 TBX2 JASPAR yes 70773611
chr5 179496512 179496522 TBX21 JASPAR yes 68198378
chr5 179496512 179496522 TBX21 JASPAR yes 70773612
chr5 179496513 179496521 MGA JASPAR yes 68198379
chr5 179496513 179496521 TBX15 JASPAR yes 68198380
chr5 179496513 179496521 TBX1 JASPAR yes 68198381
chr5 179496513 179496521 TBX4 JASPAR yes 68198382
chr5 179496513 179496521 TBX5 JASPAR yes 68198383
chr5 179496513 179496521 MGA JASPAR yes 70773613
chr5 179496513 179496521 TBX15 JASPAR yes 70773614
chr5 179496513 179496521 TBX1 JASPAR yes 70773615
chr5 179496513 179496521 TBX4 JASPAR yes 70773616
chr5 179496513 179496521 TBX5 JASPAR yes 70773617
chr5 179496522 179496535 EOMES JASPAR yes 68198384
chr5 179496522 179496535 EOMES JASPAR yes 70773618
chr5 179496524 179496535 TBX20 JASPAR yes 68198385
chr5 179496524 179496535 TBX20 JASPAR yes 70773619
chr5 179496525 179496535 TBX21 JASPAR yes 68198386
chr5 179496525 179496535 TBX21 JASPAR yes 70773620
chr5 179496525 179496539 MTF1 JASPAR yes 68198387
chr5 179496525 179496539 MTF1 JASPAR yes 70773621
chr5 179496548 179496552 YY1 TRANSFAC yes 68198388
chr5 179496548 179496552 YY1 TRANSFAC yes 70773622
chr5 179496550 179496556 TCF4 TRANSFAC yes 68198389
chr5 179496550 179496556 TCF4 TRANSFAC yes 70773623
chr5 179496587 179496594 SPIB JASPAR yes 68198390
chr5 179496587 179496594 SPIB JASPAR yes 70773624
chr5 179496596 179496605 SRY JASPAR yes 68198391
chr5 179496596 179496605 SRY JASPAR yes 70773625
chr5 179496598 179496601 MYB TRANSFAC yes 68198392
chr5 179496598 179496601 MYB TRANSFAC yes 70773626
chr5 179496623 179496628 ETS2 TRANSFAC yes 68198393
chr5 179496623 179496628 ETS2 TRANSFAC yes 70773627
chr5 179496628 179496638 BARHL2 JASPAR yes 68198394
chr5 179496628 179496638 BARHL2 JASPAR yes 70773628
chr5 179496633 179496645 TGIF1 JASPAR yes 68198395
chr5 179496633 179496645 TGIF1 JASPAR yes 70773629
chr5 179496638 179496646 MEIS2 JASPAR yes 68198396
chr5 179496638 179496646 MEIS3 JASPAR yes 68198397
chr5 179496638 179496646 MEIS2 JASPAR yes 70773630
chr5 179496638 179496646 MEIS3 JASPAR yes 70773631
chr5 179496639 179496643 NFE TRANSFAC yes 68198398
chr5 179496639 179496643 NFE TRANSFAC yes 70773632
chr5 179496639 179496646 MEIS1 JASPAR yes 68198399
chr5 179496639 179496646 MEIS1 JASPAR yes 70773633
chr5 179496641 179496649 FOXO3 JASPAR yes 68198400
chr5 179496641 179496649 FOXO3 JASPAR yes 70773634
chr5 179496663 179496667 YY1 TRANSFAC yes 68198401
chr5 179496663 179496667 YY1 TRANSFAC yes 70773635
chr5 179496663 179496674 CEBPB JASPAR yes 68198402
chr5 179496663 179496674 CEBPB JASPAR yes 70773636
chr5 179496663 179496676 ATF4 JASPAR yes 68198403
chr5 179496663 179496676 ATF4 JASPAR yes 70773637
chr5 179496664 179496675 CEBPA JASPAR yes 68198404
chr5 179496664 179496675 CEBPA JASPAR yes 70773638
chr5 179496664 179496677 JUN JASPAR yes 68198405
chr5 179496664 179496677 JUN JASPAR yes 70773639
chr5 179496667 179496679 PBX1 JASPAR yes 68198406
chr5 179496667 179496679 PBX1 JASPAR yes 70773640
chr5 179496676 179496680 YY1 TRANSFAC yes 68198407
chr5 179496676 179496680 YY1 TRANSFAC yes 70773641
chr5 179496686 179496697 FOXA1 JASPAR yes 68198408
chr5 179496686 179496697 FOXA1 JASPAR yes 70773642
chr5 179496686 179496701 FOXA1 JASPAR yes 68198409
chr5 179496686 179496701 FOXA1 JASPAR yes 70773643
chr5 179496698 179496708 BARHL2 JASPAR yes 68198410
chr5 179496698 179496708 BARHL2 JASPAR yes 70773644
SNP sites on vista50382[chr5:179496400-179496705]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179496422 rs12652904 C A,T
RREB1
8747160
chr5 179496472 rs546452495 G C
EBF1 ZNF263
8747161
chr5 179496533 rs114825761 A G
EOMES MTF1 TBX20 TBX21
8747162
chr5 179496579 rs76198375 A G no 8747163
Genes possibly regulated by vista50382[chr5:179496400-179496705]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179338651 179499118 - RNF130 ENSG00000113269.9 179499118 0.72 1.0 6073 97587
Expression level of Genes
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miRNAs possibly regulated by vista50382[chr5:179496400-179496705]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results