EnhancerDB
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  3. vista50384[chr5:179510185-179510353]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50384[chr5:179510185-179510353]
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Tissue distribution of vista50384
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Transcription factor that possibly regulate vista50384[chr5:179510185-179510353]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179510242 179510254 TEAD1 JASPAR yes 68198488
chr5 179510242 179510254 TEAD1 JASPAR yes 70773708
chr5 179510259 179510265 LEF1 TRANSFAC yes 68198489
chr5 179510259 179510265 SOX10 JASPAR yes 68198490
chr5 179510259 179510265 LEF1 TRANSFAC yes 70773709
chr5 179510259 179510265 SOX10 JASPAR yes 70773710
chr5 179510260 179510269 SRY JASPAR yes 68198491
chr5 179510260 179510269 SRY JASPAR yes 70773711
chr5 179510291 179510304 POU2F2 JASPAR yes 68198492
chr5 179510291 179510304 POU2F2 JASPAR yes 70773712
chr5 179510291 179510305 POU1F1 JASPAR yes 68198493
chr5 179510291 179510305 POU1F1 JASPAR yes 70773713
chr5 179510292 179510304 POU3F1 JASPAR yes 68198494
chr5 179510292 179510304 POU3F2 JASPAR yes 68198495
chr5 179510292 179510304 POU3F1 JASPAR yes 70773714
chr5 179510292 179510304 POU3F2 JASPAR yes 70773715
chr5 179510293 179510297 YY1 TRANSFAC yes 68198496
chr5 179510293 179510297 YY1 TRANSFAC yes 70773716
chr5 179510293 179510305 POU2F1 JASPAR yes 68198497
chr5 179510293 179510305 POU2F1 JASPAR yes 70773717
chr5 179510294 179510301 POU2F1 TRANSFAC yes 68198498
chr5 179510294 179510301 POU2F2C TRANSFAC yes 68198499
chr5 179510294 179510301 POU2F2 TRANSFAC yes 68198500
chr5 179510294 179510301 POU2F1 TRANSFAC yes 70773718
chr5 179510294 179510301 POU2F2C TRANSFAC yes 70773719
chr5 179510294 179510301 POU2F2 TRANSFAC yes 70773720
chr5 179510294 179510303 POU5F1B JASPAR yes 68198501
chr5 179510294 179510303 POU5F1B JASPAR yes 70773721
chr5 179510315 179510318 MYB TRANSFAC yes 68198502
chr5 179510315 179510318 MYB TRANSFAC yes 70773722
chr5 179510323 179510344 ZNF263 JASPAR yes 68198503
chr5 179510323 179510344 ZNF263 JASPAR yes 70773723
chr5 179510326 179510347 ZNF263 JASPAR yes 68198504
chr5 179510326 179510347 ZNF263 JASPAR yes 70773724
chr5 179510333 179510339 SOX10 JASPAR yes 68198505
chr5 179510333 179510339 SOX10 JASPAR yes 70773725
chr5 179510333 179510347 SPIC JASPAR yes 68198506
chr5 179510333 179510347 SPIC JASPAR yes 70773726
chr5 179510339 179510345 MAZ TRANSFAC yes 68198507
chr5 179510339 179510345 MAZ TRANSFAC yes 70773727
chr5 179510339 179510350 E2F6 JASPAR yes 68198508
chr5 179510339 179510350 E2F6 JASPAR yes 70773728
SNP sites on vista50384[chr5:179510185-179510353]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179510241 rs566736479 G A no 8747216
chr5 179510248 rs186857365 T C
TEAD1
8747217
chr5 179510275 rs533576635 C G,T no 8747218
chr5 179510346 rs372272317 G T
E2F6 SPIC ZNF263
8747219
Genes possibly regulated by vista50384[chr5:179510185-179510353]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179338651 179499118 - RNF130 ENSG00000113269.9 179499118 0.72 1.0 6073 88933
Expression level of Genes
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miRNAs possibly regulated by vista50384[chr5:179510185-179510353]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results