EnhancerDB
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  3. vista50385[chr5:179512347-179512479]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50385[chr5:179512347-179512479]
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Tissue distribution of vista50385
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Transcription factor that possibly regulate vista50385[chr5:179512347-179512479]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179512174 179512644 GATA3 UCSC Txn Factor no Conserved 108537769
chr5 179512205 179512485 FOXA1 UCSC Txn Factor no Conserved 108537770
chr5 179512341 179512352 FOXA1 JASPAR yes 68198751
chr5 179512341 179512352 FOXA1 JASPAR yes 70773729
chr5 179512341 179512356 FOXA1 JASPAR yes 68198752
chr5 179512341 179512356 FOXA1 JASPAR yes 70773730
chr5 179512342 179512353 FOXC1 JASPAR yes 68198753
chr5 179512342 179512353 FOXC1 JASPAR yes 70773731
chr5 179512342 179512354 FOXC2 JASPAR yes 68198754
chr5 179512342 179512354 FOXC2 JASPAR yes 70773732
chr5 179512345 179512353 FOXO3 JASPAR yes 68198755
chr5 179512345 179512353 FOXO3 JASPAR yes 70773733
chr5 179512347 179512360 ELF1 JASPAR yes 68198756
chr5 179512347 179512360 ELF1 JASPAR yes 70773734
chr5 179512348 179512360 EHF JASPAR yes 68198757
chr5 179512348 179512360 EHF JASPAR yes 70773735
chr5 179512348 179512361 ELF3 JASPAR yes 68198758
chr5 179512348 179512361 ELF3 JASPAR yes 70773736
chr5 179512349 179512360 ELF5 JASPAR yes 68198759
chr5 179512349 179512360 ELF5 JASPAR yes 70773737
chr5 179512351 179512356 ETS2 TRANSFAC yes 68198760
chr5 179512351 179512356 ETS2 TRANSFAC yes 70773738
chr5 179512351 179512359 FEV JASPAR yes 68198761
chr5 179512351 179512359 FEV JASPAR yes 70773739
chr5 179512352 179512363 NFKB1 JASPAR yes 68198762
chr5 179512352 179512363 NFKB1 JASPAR yes 70773740
chr5 179512353 179512363 REL JASPAR yes 68198763
chr5 179512353 179512363 REL JASPAR yes 70773741
chr5 179512366 179512379 DUXA JASPAR yes 68198764
chr5 179512366 179512379 DUXA JASPAR yes 70773742
chr5 179512367 179512378 DUX4 JASPAR yes 68198765
chr5 179512367 179512378 DUX4 JASPAR yes 70773743
chr5 179512401 179512415 GATA2 JASPAR yes 68198766
chr5 179512401 179512415 GATA2 JASPAR yes 70773744
chr5 179512403 179512411 GATA3 JASPAR yes 68198767
chr5 179512403 179512411 GATA5 JASPAR yes 68198768
chr5 179512403 179512411 GATA3 JASPAR yes 70773745
chr5 179512403 179512411 GATA5 JASPAR yes 70773746
chr5 179512435 179512446 NRL JASPAR yes 68198769
chr5 179512435 179512446 NRL JASPAR yes 70773747
chr5 179512454 179512460 MAZ TRANSFAC yes 68198770
chr5 179512454 179512460 MAZ TRANSFAC yes 70773748
SNP sites on vista50385[chr5:179512347-179512479]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179512371 rs570174929 T C
DUX4 DUXA FOXA1 GATA3
8747243
chr5 179512390 rs1345088 C T
FOXA1 GATA3
8747244
Genes possibly regulated by vista50385[chr5:179512347-179512479]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179338651 179499118 - RNF130 ENSG00000113269.9 179499118 0.72 1.0 6073 86771
Expression level of Genes
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miRNAs possibly regulated by vista50385[chr5:179512347-179512479]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results