EnhancerDB
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  3. vista50388[chr5:179517331-179517686]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50388[chr5:179517331-179517686]
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Tissue distribution of vista50388
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Transcription factor that possibly regulate vista50388[chr5:179517331-179517686]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179517440 179518005 CTCF UCSC Txn Factor no Conserved 108537773
chr5 179517470 179517755 RAD21 UCSC Txn Factor no Conserved 108537774
chr5 179517489 179517730 EGR1 UCSC Txn Factor no Conserved 108537775
chr5 179517321 179517335 GLIS3 JASPAR yes 68199468
chr5 179517321 179517335 GLIS3 JASPAR yes 70773795
chr5 179517332 179517339 SP1 TRANSFAC yes 68199469
chr5 179517332 179517339 SP1 TRANSFAC yes 70773796
chr5 179517334 179517339 SP1 TRANSFAC yes 68199470
chr5 179517334 179517339 SP1 TRANSFAC yes 70773797
chr5 179517367 179517388 ZNF263 JASPAR yes 68199471
chr5 179517367 179517388 ZNF263 JASPAR yes 70773798
chr5 179517369 179517377 TBX15 JASPAR yes 68199472
chr5 179517369 179517377 TBX15 JASPAR yes 70773799
chr5 179517370 179517375 SP1 TRANSFAC yes 68199473
chr5 179517370 179517375 SP1 TRANSFAC yes 70773800
chr5 179517375 179517387 NHLH1 JASPAR yes 68199474
chr5 179517375 179517387 NHLH1 JASPAR yes 70773801
chr5 179517376 179517386 NHLH1 JASPAR yes 68199475
chr5 179517376 179517386 NHLH1 JASPAR yes 70773802
chr5 179517395 179517405 SP1 JASPAR yes 68199476
chr5 179517395 179517405 SP1 JASPAR yes 70773803
chr5 179517395 179517416 ZNF263 JASPAR yes 68199477
chr5 179517395 179517416 ZNF263 JASPAR yes 70773804
chr5 179517397 179517403 MAZ TRANSFAC yes 68199478
chr5 179517397 179517403 MAZ TRANSFAC yes 70773805
chr5 179517401 179517415 PLAG1 JASPAR yes 68199479
chr5 179517401 179517415 PLAG1 JASPAR yes 70773806
chr5 179517402 179517406 H4TF2 TRANSFAC yes 68199480
chr5 179517402 179517406 H4TF2 TRANSFAC yes 70773807
chr5 179517411 179517421 SP1 JASPAR yes 68199481
chr5 179517411 179517421 SP1 JASPAR yes 70773808
chr5 179517412 179517417 ETS2 TRANSFAC yes 68199482
chr5 179517412 179517417 ETS2 TRANSFAC yes 70773809
chr5 179517416 179517427 E2F6 JASPAR yes 68199483
chr5 179517416 179517427 E2F6 JASPAR yes 70773810
chr5 179517462 179517474 ZBTB7B JASPAR yes 68199484
chr5 179517462 179517474 ZBTB7C JASPAR yes 68199485
chr5 179517462 179517474 ZBTB7B JASPAR yes 70773811
chr5 179517462 179517474 ZBTB7C JASPAR yes 70773812
chr5 179517463 179517475 ZBTB7A JASPAR yes 68199486
chr5 179517463 179517475 ZBTB7A JASPAR yes 70773813
chr5 179517465 179517470 SP1 TRANSFAC yes 68199487
chr5 179517465 179517470 SP1 TRANSFAC yes 70773814
chr5 179517472 179517486 GLIS2 JASPAR yes 68199488
chr5 179517472 179517486 GLIS2 JASPAR yes 70773815
chr5 179517474 179517486 INSM1 JASPAR yes 68199489
chr5 179517474 179517486 INSM1 JASPAR yes 70773816
chr5 179517474 179517494 RREB1 JASPAR yes 68199490
chr5 179517474 179517494 RREB1 JASPAR yes 70773817
chr5 179517479 179517486 SP1 TRANSFAC yes 68199491
chr5 179517479 179517486 SP1 TRANSFAC yes 70773818
chr5 179517479 179517489 SP1 JASPAR yes 68199492
chr5 179517479 179517489 SP1 JASPAR yes 70773819
chr5 179517479 179517500 ZNF263 JASPAR yes 68199493
chr5 179517479 179517500 ZNF263 JASPAR yes 70773820
chr5 179517480 179517488 SP1 TRANSFAC yes 68199494
chr5 179517480 179517488 SP1 TRANSFAC yes 70773821
chr5 179517480 179517489 SP1 TRANSFAC yes 68199495
chr5 179517480 179517489 SP1 TRANSFAC yes 70773822
chr5 179517480 179517490 SP1 JASPAR yes 68199496
chr5 179517480 179517490 SP1 JASPAR yes 70773823
chr5 179517481 179517486 SP1 TRANSFAC yes 68199497
chr5 179517481 179517486 SP1 TRANSFAC yes 70773824
chr5 179517482 179517487 SP1 TRANSFAC yes 68199498
chr5 179517482 179517487 SP1 TRANSFAC yes 70773825
chr5 179517482 179517488 SP1 TRANSFAC yes 68199499
chr5 179517482 179517488 SP1 TRANSFAC yes 70773826
chr5 179517487 179517492 SP1 TRANSFAC yes 68199500
chr5 179517487 179517492 SP1 TRANSFAC yes 70773827
chr5 179517489 179517494 TFAP2A TRANSFAC yes 68199501
chr5 179517489 179517494 TFAP2A TRANSFAC yes 70773828
chr5 179517489 179517495 MZF1 JASPAR yes 68199502
chr5 179517489 179517495 MZF1 JASPAR yes 70773829
chr5 179517512 179517523 E2F1 JASPAR yes 68199503
chr5 179517512 179517523 E2F1 JASPAR yes 70773830
chr5 179517534 179517539 SP1 TRANSFAC yes 68199504
chr5 179517534 179517539 SP1 TRANSFAC yes 70773831
chr5 179517550 179517555 SP1 TRANSFAC yes 68199505
chr5 179517550 179517555 SP1 TRANSFAC yes 70773832
chr5 179517568 179517573 SP1 TRANSFAC yes 68199506
chr5 179517568 179517573 SP1 TRANSFAC yes 70773833
chr5 179517605 179517610 SP1 TRANSFAC yes 68199507
chr5 179517605 179517610 SP1 TRANSFAC yes 70773834
chr5 179517611 179517622 TFAP2A JASPAR yes 68199508
chr5 179517611 179517622 TFAP2B JASPAR yes 68199509
chr5 179517611 179517622 TFAP2A JASPAR yes 70773835
chr5 179517611 179517622 TFAP2B JASPAR yes 70773836
chr5 179517616 179517624 SP1 TRANSFAC yes 68199510
chr5 179517616 179517624 SP1 TRANSFAC yes 70773837
chr5 179517618 179517624 MAZ TRANSFAC yes 68199511
chr5 179517618 179517624 MAZ TRANSFAC yes 70773838
chr5 179517622 179517641 CTCF JASPAR yes 68199512
chr5 179517622 179517641 CTCF JASPAR yes 70773839
chr5 179517660 179517681 IRF1 JASPAR yes 68199513
chr5 179517660 179517681 IRF1 JASPAR yes 70773840
chr5 179517663 179517684 IRF1 JASPAR yes 68199514
chr5 179517663 179517684 IRF1 JASPAR yes 70773841
chr5 179517666 179517681 FOXP1 JASPAR yes 68199515
chr5 179517666 179517681 FOXP1 JASPAR yes 70773842
chr5 179517668 179517683 FOXP1 JASPAR yes 68199516
chr5 179517668 179517683 FOXP1 JASPAR yes 70773843
chr5 179517669 179517684 FOXP1 JASPAR yes 68199517
chr5 179517669 179517684 FOXP1 JASPAR yes 70773844
chr5 179517670 179517685 FOXP1 JASPAR yes 68199518
chr5 179517670 179517685 FOXP1 JASPAR yes 70773845
chr5 179517671 179517686 FOXP1 JASPAR yes 68199519
chr5 179517671 179517686 FOXP1 JASPAR yes 70773846
chr5 179517672 179517687 FOXP1 JASPAR yes 68199520
chr5 179517672 179517687 FOXP1 JASPAR yes 70773847
SNP sites on vista50388[chr5:179517331-179517686]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179517399 rs574902260 G T
MAZ SP1 ZNF263
8747316
chr5 179517413 rs560466456 G A
ETS2 PLAG1 SP1 ZNF263
8747317
chr5 179517498 rs564112342 A G
CTCF EGR1 RAD21 ZNF263
8747318
chr5 179517520 rs546934967 G A
CTCF E2F1 EGR1 RAD21
8747319
chr5 179517525 rs375607474 A G
CTCF EGR1 RAD21
8747320
chr5 179517578 rs567772702 T A
CTCF EGR1 RAD21
8747321
chr5 179517597 rs546984521 G A
CTCF EGR1 RAD21
8747322
chr5 179517615 rs61088274 C T
CTCF EGR1 RAD21 TFAP2A TFAP2B
8747323
chr5 179517647 rs145866927 G A
CTCF EGR1 RAD21
8747324
Genes possibly regulated by vista50388[chr5:179517331-179517686]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179338651 179499118 - RNF130 ENSG00000113269.9 179499118 0.72 1.0 6073 81787
Expression level of Genes
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miRNAs possibly regulated by vista50388[chr5:179517331-179517686]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results