EnhancerDB
  1. Home
  2. Enhancers
  3. vista50390[chr5:179575752-179576029]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50390[chr5:179575752-179576029]
Back to top
Tissue distribution of vista50390
Back to top
Transcription factor that possibly regulate vista50390[chr5:179575752-179576029]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179575766 179575776 MSC JASPAR yes 70773898
chr5 179575775 179575779 TEAD2 TRANSFAC yes 70773899
chr5 179575775 179575785 MNX1 JASPAR yes 70773900
chr5 179575788 179575793 GATA2 JASPAR yes 70773901
chr5 179575789 179575804 HNF1A JASPAR yes 70773902
chr5 179575790 179575803 HNF1B JASPAR yes 70773903
chr5 179575806 179575810 YY1 TRANSFAC yes 70773904
chr5 179575809 179575815 TCF4 TRANSFAC yes 70773905
chr5 179575810 179575819 SRY JASPAR yes 70773906
chr5 179575815 179575818 MYB TRANSFAC yes 70773907
chr5 179575848 179575852 YY1 TRANSFAC yes 70773908
chr5 179575866 179575882 POU4F2 JASPAR yes 70773909
chr5 179575868 179575872 YY1 TRANSFAC yes 70773910
chr5 179575875 179575879 YY1 TRANSFAC yes 70773911
chr5 179575916 179575931 FOXA1 JASPAR yes 70773912
chr5 179575917 179575929 FOXI1 JASPAR yes 70773913
chr5 179575917 179575932 FOXP1 JASPAR yes 70773914
chr5 179575918 179575929 FOXP2 JASPAR yes 70773915
chr5 179575918 179575930 FOXC2 JASPAR yes 70773916
chr5 179575918 179575932 FOXF2 JASPAR yes 70773917
chr5 179575919 179575927 FOXG1 JASPAR yes 70773918
chr5 179575919 179575927 FOXO3 JASPAR yes 70773919
chr5 179575919 179575930 FOXC1 JASPAR yes 70773920
chr5 179575920 179575931 FOXA1 JASPAR yes 70773921
chr5 179575921 179575929 GATA3 JASPAR yes 70773922
chr5 179575928 179575938 TEAD1 JASPAR yes 70773923
chr5 179575928 179575938 TEAD4 JASPAR yes 70773924
chr5 179575929 179575937 TEAD3 JASPAR yes 70773925
chr5 179575937 179575952 HNF4A JASPAR yes 70773926
chr5 179575938 179575953 HNF4G JASPAR yes 70773927
chr5 179575939 179575942 MYB TRANSFAC yes 70773928
chr5 179575942 179575948 LEF1 TRANSFAC yes 70773929
chr5 179575942 179575948 SOX10 JASPAR yes 70773930
chr5 179575951 179575955 YY1 TRANSFAC yes 70773931
chr5 179575991 179575998 MEIS1 JASPAR yes 70773932
chr5 179575991 179575999 MEIS2 JASPAR yes 70773933
chr5 179575991 179575999 MEIS3 JASPAR yes 70773934
chr5 179575991 179576003 GRHL1 JASPAR yes 70773935
chr5 179575996 179576017 IRF1 JASPAR yes 70773936
chr5 179575998 179576013 FOXP1 JASPAR yes 70773937
chr5 179576000 179576012 IRF1 JASPAR yes 70773938
chr5 179576000 179576014 IRF7 JASPAR yes 70773939
chr5 179576005 179576020 MAFK JASPAR yes 70773940
chr5 179576014 179576018 YY1 TRANSFAC yes 70773941
SNP sites on vista50390[chr5:179575752-179576029]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179575898 rs140685003 C T no 8747507
chr5 179575923 rs189694005 T C
FOXA1 FOXC1 FOXC2 FOXF2 FOXG1 FOXI1 FOXO3 FOXP1 FOXP2 GATA3
8747508
Genes possibly regulated by vista50390[chr5:179575752-179576029]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179338651 179499118 - RNF130 ENSG00000113269.9 179499118 0.72 1.0 6073 23366
chr5 179527795 179636153 - RASGEF1C ENSG00000146090.11 179636153 0.88 1.0 6074 39876
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50390[chr5:179575752-179576029]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results