EnhancerDB
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  3. vista50391[chr5:179604412-179604725]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50391[chr5:179604412-179604725]
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Tissue distribution of vista50391
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Transcription factor that possibly regulate vista50391[chr5:179604412-179604725]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179604451 179604455 LFA1 TRANSFAC yes 70773942
chr5 179604456 179604460 LFA1 TRANSFAC yes 70773943
chr5 179604462 179604473 TFAP2A JASPAR yes 70773944
chr5 179604462 179604473 TFAP2B JASPAR yes 70773945
chr5 179604462 179604473 TFAP2C JASPAR yes 70773946
chr5 179604463 179604472 TFAP2A JASPAR yes 70773947
chr5 179604472 179604477 ETS2 TRANSFAC yes 70773948
chr5 179604472 179604485 ELF3 JASPAR yes 70773949
chr5 179604473 179604484 ELF5 JASPAR yes 70773950
chr5 179604473 179604485 EHF JASPAR yes 70773951
chr5 179604473 179604485 ELF4 JASPAR yes 70773952
chr5 179604475 179604481 ETS1 JASPAR yes 70773953
chr5 179604475 179604481 SPI1 JASPAR yes 70773954
chr5 179604475 179604485 ELK1 JASPAR yes 70773955
chr5 179604488 179604494 NFIC JASPAR yes 70773956
chr5 179604507 179604517 ID4 JASPAR yes 70773957
chr5 179604508 179604529 REST JASPAR yes 70773958
chr5 179604512 179604516 NFE TRANSFAC yes 70773959
chr5 179604516 179604527 ESRRB JASPAR yes 70773960
chr5 179604525 179604539 NR2F1 JASPAR yes 70773961
chr5 179604550 179604560 NEUROG2 JASPAR yes 70773962
chr5 179604550 179604562 TAL1 JASPAR yes 70773963
chr5 179604564 179604579 FOXP1 JASPAR yes 70773964
chr5 179604567 179604578 FOXP2 JASPAR yes 70773965
chr5 179604568 179604576 FOXO3 JASPAR yes 70773966
chr5 179604581 179604585 YY1 TRANSFAC yes 70773967
chr5 179604588 179604596 EHF JASPAR yes 70773968
chr5 179604590 179604597 SPIB JASPAR yes 70773969
chr5 179604634 179604639 TFAP2A TRANSFAC yes 70773970
chr5 179604634 179604640 MZF1 JASPAR yes 70773971
chr5 179604635 179604645 SP1 JASPAR yes 70773972
chr5 179604636 179604641 ETS2 TRANSFAC yes 70773973
chr5 179604661 179604666 MYC TRANSFAC yes 70773974
chr5 179604668 179604674 YY1 JASPAR yes 70773975
chr5 179604671 179604681 TFE3 JASPAR yes 70773976
chr5 179604671 179604681 TFEB JASPAR yes 70773977
chr5 179604671 179604681 TFEC JASPAR yes 70773978
chr5 179604671 179604682 USF1 JASPAR yes 70773979
chr5 179604671 179604682 USF2 JASPAR yes 70773980
chr5 179604672 179604682 MAX JASPAR yes 70773981
chr5 179604698 179604713 LEF1 JASPAR yes 70773982
chr5 179604699 179604713 TCF7L2 JASPAR yes 70773983
SNP sites on vista50391[chr5:179604412-179604725]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179604436 rs10074266 G A no 8747734
chr5 179604447 rs744250 T A no 8747735
chr5 179604449 rs554740904 C T no 8747736
chr5 179604480 rs533765592 C T
EHF ELF3 ELF4 ELF5 ELK1 ETS1 SPI1
8747737
chr5 179604486 rs744252 C T no 8747738
chr5 179604487 rs744251 C G no 8747739
chr5 179604535 rs544477130 C T
NR2F1
8747740
chr5 179604600 rs187207034 T C no 8747741
chr5 179604604 rs138194222 CGTG C no 8747742
Genes possibly regulated by vista50391[chr5:179604412-179604725]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179527795 179636153 - RASGEF1C ENSG00000146090.11 179636153 0.88 1.0 6074 68572
Expression level of Genes
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miRNAs possibly regulated by vista50391[chr5:179604412-179604725]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results