EnhancerDB
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  3. vista50394[chr5:179770152-179770325]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50394[chr5:179770152-179770325]
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Tissue distribution of vista50394
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Transcription factor that possibly regulate vista50394[chr5:179770152-179770325]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179770147 179770153 HiNF-A TRANSFAC yes 68206067
chr5 179770147 179770153 HiNF-A TRANSFAC yes 70774053
chr5 179770159 179770168 NFIX JASPAR yes 68206068
chr5 179770159 179770168 NFIX JASPAR yes 70774054
chr5 179770159 179770169 NFIA JASPAR yes 68206069
chr5 179770159 179770169 NFIA JASPAR yes 70774055
chr5 179770161 179770167 NFIC JASPAR yes 68206070
chr5 179770161 179770167 NFIC JASPAR yes 70774056
chr5 179770165 179770181 SOX4 JASPAR yes 68206071
chr5 179770165 179770181 SOX4 JASPAR yes 70774057
chr5 179770185 179770197 PBX1 JASPAR yes 68206072
chr5 179770185 179770197 PBX1 JASPAR yes 70774058
chr5 179770203 179770219 POU4F2 JASPAR yes 68206073
chr5 179770203 179770219 POU4F2 JASPAR yes 70774059
chr5 179770205 179770219 JUN JASPAR yes 68206074
chr5 179770205 179770219 JUN JASPAR yes 70774060
chr5 179770207 179770217 POU6F2 JASPAR yes 68206075
chr5 179770207 179770217 POU6F2 JASPAR yes 70774061
chr5 179770207 179770218 BATF JASPAR yes 68206076
chr5 179770207 179770218 BATF JASPAR yes 70774062
chr5 179770208 179770219 FOSL2 JASPAR yes 68206077
chr5 179770208 179770219 JUNB JASPAR yes 68206078
chr5 179770208 179770219 FOSL2 JASPAR yes 70774063
chr5 179770208 179770219 JUNB JASPAR yes 70774064
chr5 179770209 179770220 FOS JASPAR yes 68206079
chr5 179770209 179770220 FOSL1 JASPAR yes 68206080
chr5 179770209 179770220 JUND JASPAR yes 68206081
chr5 179770209 179770220 NFE2 JASPAR yes 68206082
chr5 179770209 179770220 FOS JASPAR yes 70774065
chr5 179770209 179770220 FOSL1 JASPAR yes 70774066
chr5 179770209 179770220 JUND JASPAR yes 70774067
chr5 179770209 179770220 NFE2 JASPAR yes 70774068
chr5 179770210 179770219 JDP2 JASPAR yes 68206083
chr5 179770210 179770219 JDP2 JASPAR yes 70774069
chr5 179770210 179770221 JUNB JASPAR yes 68206084
chr5 179770210 179770221 NFE2L2 JASPAR yes 68206085
chr5 179770210 179770221 JUNB JASPAR yes 70774070
chr5 179770210 179770221 NFE2L2 JASPAR yes 70774071
chr5 179770210 179770224 JUN JASPAR yes 68206086
chr5 179770210 179770224 JUN JASPAR yes 70774072
chr5 179770211 179770218 JUN TRANSFAC yes 68206087
chr5 179770211 179770218 JUN TRANSFAC yes 70774073
chr5 179770211 179770222 BATF JASPAR yes 68206088
chr5 179770211 179770222 BATF JASPAR yes 70774074
chr5 179770226 179770247 ZNF263 JASPAR yes 68206089
chr5 179770226 179770247 ZNF263 JASPAR yes 70774075
chr5 179770228 179770242 GLIS2 JASPAR yes 68206090
chr5 179770228 179770242 ZIC1 JASPAR yes 68206091
chr5 179770228 179770242 GLIS2 JASPAR yes 70774076
chr5 179770228 179770242 ZIC1 JASPAR yes 70774077
chr5 179770228 179770243 ZIC3 JASPAR yes 68206092
chr5 179770228 179770243 ZIC4 JASPAR yes 68206093
chr5 179770228 179770243 ZIC3 JASPAR yes 70774078
chr5 179770228 179770243 ZIC4 JASPAR yes 70774079
chr5 179770243 179770253 SP1 JASPAR yes 68206094
chr5 179770243 179770253 SP1 JASPAR yes 70774080
chr5 179770275 179770280 ATF1 TRANSFAC yes 68206095
chr5 179770275 179770280 ATF1 TRANSFAC yes 70774081
chr5 179770281 179770294 HSF1 JASPAR yes 68206096
chr5 179770281 179770294 HSF4 JASPAR yes 68206097
chr5 179770281 179770294 HSF1 JASPAR yes 70774082
chr5 179770281 179770294 HSF4 JASPAR yes 70774083
SNP sites on vista50394[chr5:179770152-179770325]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179770155 rs542721095 T C no 8748303
chr5 179770163 rs182327032 G A
NFIA NFIC NFIX
8748304
chr5 179770243 rs76056450 C T
SP1 ZIC3 ZIC4 ZNF263
8748305
chr5 179770258 rs115338093 C T no 8748306
chr5 179770315 rs551857722 G A no 8748307
Genes possibly regulated by vista50394[chr5:179770152-179770325]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179660143 179719099 - MAPK9 ENSG00000050748.13 179719099 0.67 0.99 6075 48947
chr5 179727690 179780387 - GFPT2 ENSG00000131459.8 179780387 0.84 1.0 6076 89938
Expression level of Genes
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miRNAs possibly regulated by vista50394[chr5:179770152-179770325]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results