EnhancerDB
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  3. vista50398[chr5:179892034-179892360]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50398[chr5:179892034-179892360]
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Tissue distribution of vista50398
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Transcription factor that possibly regulate vista50398[chr5:179892034-179892360]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 179892024 179892464 NFYB UCSC Txn Factor no Conserved 108537780
chr5 179892035 179892046 ELK4 JASPAR yes 68210984
chr5 179892035 179892046 ELK4 JASPAR yes 70774233
chr5 179892036 179892048 EHF JASPAR yes 68210985
chr5 179892036 179892048 ELF1 JASPAR yes 68210986
chr5 179892036 179892048 ELF4 JASPAR yes 68210987
chr5 179892036 179892048 EHF JASPAR yes 70774234
chr5 179892036 179892048 ELF1 JASPAR yes 70774235
chr5 179892036 179892048 ELF4 JASPAR yes 70774236
chr5 179892036 179892049 ELF1 JASPAR yes 68210988
chr5 179892036 179892049 ELF1 JASPAR yes 70774237
chr5 179892037 179892044 SPI1 JASPAR yes 68210989
chr5 179892037 179892044 SPI1 JASPAR yes 70774238
chr5 179892037 179892045 EHF JASPAR yes 68210990
chr5 179892037 179892045 FEV JASPAR yes 68210991
chr5 179892037 179892045 EHF JASPAR yes 70774239
chr5 179892037 179892045 FEV JASPAR yes 70774240
chr5 179892045 179892049 H4TF2 TRANSFAC yes 68210992
chr5 179892045 179892049 H4TF2 TRANSFAC yes 70774241
chr5 179892052 179892057 TFAP2A TRANSFAC yes 68210993
chr5 179892052 179892057 TFAP2A TRANSFAC yes 70774242
chr5 179892052 179892058 MZF1 JASPAR yes 68210994
chr5 179892052 179892058 MZF1 JASPAR yes 70774243
chr5 179892072 179892076 NFE TRANSFAC yes 68210995
chr5 179892072 179892076 NFE TRANSFAC yes 70774244
chr5 179892086 179892097 HOXC11 JASPAR yes 68210996
chr5 179892086 179892097 HOXC12 JASPAR yes 68210997
chr5 179892086 179892097 HOXC11 JASPAR yes 70774245
chr5 179892086 179892097 HOXC12 JASPAR yes 70774246
chr5 179892087 179892097 HOXD11 JASPAR yes 68210998
chr5 179892087 179892097 HOXD11 JASPAR yes 70774247
chr5 179892093 179892108 NFYB JASPAR yes 68210999
chr5 179892093 179892108 NFYB JASPAR yes 70774248
chr5 179892095 179892111 NFYA JASPAR yes 68211000
chr5 179892095 179892111 NFYA JASPAR yes 70774249
chr5 179892096 179892114 NFYA JASPAR yes 68211001
chr5 179892096 179892114 NFYA JASPAR yes 70774250
chr5 179892099 179892114 MAFK JASPAR yes 68211002
chr5 179892099 179892114 MAFK JASPAR yes 70774251
chr5 179892100 179892104 H1TF2 TRANSFAC yes 68211003
chr5 179892100 179892104 NFE TRANSFAC yes 68211004
chr5 179892100 179892104 SRF TRANSFAC yes 68211005
chr5 179892100 179892104 H1TF2 TRANSFAC yes 70774252
chr5 179892100 179892104 NFE TRANSFAC yes 70774253
chr5 179892100 179892104 SRF TRANSFAC yes 70774254
chr5 179892122 179892133 HOXC11 JASPAR yes 68211006
chr5 179892122 179892133 HOXC12 JASPAR yes 68211007
chr5 179892122 179892133 HOXC11 JASPAR yes 70774255
chr5 179892122 179892133 HOXC12 JASPAR yes 70774256
chr5 179892123 179892133 HOXD11 JASPAR yes 68211008
chr5 179892123 179892133 HOXD11 JASPAR yes 70774257
chr5 179892129 179892144 NFYB JASPAR yes 68211009
chr5 179892129 179892144 NFYB JASPAR yes 70774258
chr5 179892131 179892147 NFYA JASPAR yes 68211010
chr5 179892131 179892147 NFYA JASPAR yes 70774259
chr5 179892132 179892150 NFYA JASPAR yes 68211011
chr5 179892132 179892150 NFYA JASPAR yes 70774260
chr5 179892133 179892145 PBX1 JASPAR yes 68211012
chr5 179892133 179892145 PBX1 JASPAR yes 70774261
chr5 179892136 179892140 H1TF2 TRANSFAC yes 68211013
chr5 179892136 179892140 NFE TRANSFAC yes 68211014
chr5 179892136 179892140 SRF TRANSFAC yes 68211015
chr5 179892136 179892140 H1TF2 TRANSFAC yes 70774262
chr5 179892136 179892140 NFE TRANSFAC yes 70774263
chr5 179892136 179892140 SRF TRANSFAC yes 70774264
chr5 179892141 179892157 ZNF143 JASPAR yes 68211016
chr5 179892141 179892157 ZNF143 JASPAR yes 70774265
chr5 179892143 179892158 RUNX2 JASPAR yes 68211017
chr5 179892143 179892158 RUNX2 JASPAR yes 70774266
chr5 179892155 179892168 ZBTB18 JASPAR yes 68211018
chr5 179892155 179892168 ZBTB18 JASPAR yes 70774267
chr5 179892170 179892185 NFYB JASPAR yes 68211019
chr5 179892170 179892185 NFYB JASPAR yes 70774268
chr5 179892172 179892188 NFYA JASPAR yes 68211020
chr5 179892172 179892188 NFYA JASPAR yes 70774269
chr5 179892173 179892191 NFYA JASPAR yes 68211021
chr5 179892173 179892191 NFYA JASPAR yes 70774270
chr5 179892175 179892181 NFIC JASPAR yes 68211022
chr5 179892175 179892181 NFIC JASPAR yes 70774271
chr5 179892177 179892181 H1TF2 TRANSFAC yes 68211023
chr5 179892177 179892181 NFE TRANSFAC yes 68211024
chr5 179892177 179892181 SRF TRANSFAC yes 68211025
chr5 179892177 179892181 H1TF2 TRANSFAC yes 70774272
chr5 179892177 179892181 NFE TRANSFAC yes 70774273
chr5 179892177 179892181 SRF TRANSFAC yes 70774274
chr5 179892195 179892210 NFYB JASPAR yes 68211026
chr5 179892195 179892210 NFYB JASPAR yes 70774275
chr5 179892198 179892216 NFYA JASPAR yes 68211027
chr5 179892198 179892216 NFYA JASPAR yes 70774276
chr5 179892202 179892206 H1TF2 TRANSFAC yes 68211028
chr5 179892202 179892206 NFE TRANSFAC yes 68211029
chr5 179892202 179892206 SRF TRANSFAC yes 68211030
chr5 179892202 179892206 H1TF2 TRANSFAC yes 70774277
chr5 179892202 179892206 NFE TRANSFAC yes 70774278
chr5 179892202 179892206 SRF TRANSFAC yes 70774279
chr5 179892207 179892223 ZNF143 JASPAR yes 68211031
chr5 179892207 179892223 ZNF143 JASPAR yes 70774280
chr5 179892209 179892224 RUNX2 JASPAR yes 68211032
chr5 179892209 179892224 RUNX2 JASPAR yes 70774281
chr5 179892212 179892218 SOX10 JASPAR yes 68211033
chr5 179892212 179892218 SOX10 JASPAR yes 70774282
chr5 179892237 179892252 NFYB JASPAR yes 68211034
chr5 179892237 179892252 NFYB JASPAR yes 70774283
chr5 179892239 179892255 NFYA JASPAR yes 68211035
chr5 179892239 179892255 NFYA JASPAR yes 70774284
chr5 179892240 179892258 NFYA JASPAR yes 68211036
chr5 179892240 179892258 NFYA JASPAR yes 70774285
chr5 179892242 179892260 MAFF JASPAR yes 68211037
chr5 179892242 179892260 MAFF JASPAR yes 70774286
chr5 179892243 179892258 MAFK JASPAR yes 68211038
chr5 179892243 179892258 MAFK JASPAR yes 70774287
chr5 179892244 179892248 H1TF2 TRANSFAC yes 68211039
chr5 179892244 179892248 NFE TRANSFAC yes 68211040
chr5 179892244 179892248 SRF TRANSFAC yes 68211041
chr5 179892244 179892248 H1TF2 TRANSFAC yes 70774288
chr5 179892244 179892248 NFE TRANSFAC yes 70774289
chr5 179892244 179892248 SRF TRANSFAC yes 70774290
chr5 179892247 179892258 NRL JASPAR yes 68211042
chr5 179892247 179892258 NRL JASPAR yes 70774291
chr5 179892261 179892276 NFYB JASPAR yes 68211043
chr5 179892261 179892276 NFYB JASPAR yes 70774292
chr5 179892263 179892279 NFYA JASPAR yes 68211044
chr5 179892263 179892279 NFYA JASPAR yes 70774293
chr5 179892264 179892282 NFYA JASPAR yes 68211045
chr5 179892264 179892282 NFYA JASPAR yes 70774294
chr5 179892268 179892272 H1TF2 TRANSFAC yes 68211046
chr5 179892268 179892272 NFE TRANSFAC yes 68211047
chr5 179892268 179892272 SRF TRANSFAC yes 68211048
chr5 179892268 179892272 H1TF2 TRANSFAC yes 70774295
chr5 179892268 179892272 NFE TRANSFAC yes 70774296
chr5 179892268 179892272 SRF TRANSFAC yes 70774297
chr5 179892285 179892300 NFYB JASPAR yes 68211049
chr5 179892285 179892300 NFYB JASPAR yes 70774298
chr5 179892287 179892303 NFYA JASPAR yes 68211050
chr5 179892287 179892303 NFYA JASPAR yes 70774299
chr5 179892288 179892306 NFYA JASPAR yes 68211051
chr5 179892288 179892306 NFYA JASPAR yes 70774300
chr5 179892290 179892308 MAFF JASPAR yes 68211052
chr5 179892290 179892308 MAFF JASPAR yes 70774301
chr5 179892292 179892296 H1TF2 TRANSFAC yes 68211053
chr5 179892292 179892296 NFE TRANSFAC yes 68211054
chr5 179892292 179892296 SRF TRANSFAC yes 68211055
chr5 179892292 179892296 H1TF2 TRANSFAC yes 70774302
chr5 179892292 179892296 NFE TRANSFAC yes 70774303
chr5 179892292 179892296 SRF TRANSFAC yes 70774304
chr5 179892298 179892309 SPDEF JASPAR yes 68211056
chr5 179892298 179892309 SPDEF JASPAR yes 70774305
chr5 179892299 179892310 FLI1 JASPAR yes 68211057
chr5 179892299 179892310 FLI1 JASPAR yes 70774306
chr5 179892300 179892307 PEA3 TRANSFAC yes 68211058
chr5 179892300 179892307 PEA3 TRANSFAC yes 70774307
chr5 179892305 179892314 THAP1 JASPAR yes 68211059
chr5 179892305 179892314 THAP1 JASPAR yes 70774308
chr5 179892308 179892312 LFA1 TRANSFAC yes 68211060
chr5 179892308 179892312 LFA1 TRANSFAC yes 70774309
chr5 179892311 179892329 SRF JASPAR yes 68211061
chr5 179892311 179892329 SRF JASPAR yes 70774310
chr5 179892323 179892328 ETS2 TRANSFAC yes 68211062
chr5 179892323 179892328 ETS2 TRANSFAC yes 70774311
chr5 179892323 179892338 FOXP1 JASPAR yes 68211063
chr5 179892323 179892338 FOXP1 JASPAR yes 70774312
chr5 179892325 179892340 MEF2C JASPAR yes 68211064
chr5 179892325 179892340 MEF2C JASPAR yes 70774313
chr5 179892329 179892335 TBP TRANSFAC yes 68211065
chr5 179892329 179892335 TBP TRANSFAC yes 70774314
chr5 179892333 179892343 MSC JASPAR yes 68211066
chr5 179892333 179892343 MSC JASPAR yes 70774315
chr5 179892344 179892354 SP1 JASPAR yes 68211067
chr5 179892344 179892354 SP1 JASPAR yes 70774316
chr5 179892344 179892364 RREB1 JASPAR yes 68211068
chr5 179892344 179892364 RREB1 JASPAR yes 70774317
chr5 179892348 179892358 SP1 JASPAR yes 68211069
chr5 179892348 179892358 SP1 JASPAR yes 70774318
SNP sites on vista50398[chr5:179892034-179892360]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 179892091 rs537027626 G A
HOXC11 HOXC12 HOXD11 NFYB
8748941
chr5 179892167 rs557361813 T C
NFYB ZBTB18
8748942
chr5 179892209 rs7737094 C A,T
NFYA NFYB RUNX2 ZNF143
8748943
chr5 179892317 rs181909100 A T
NFYB SRF
8748944
Genes possibly regulated by vista50398[chr5:179892034-179892360]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 179921412 180005405 + CNOT6 ENSG00000113300.7 179921412 0.79 0.99 6077 70948
Expression level of Genes
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miRNAs possibly regulated by vista50398[chr5:179892034-179892360]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results