EnhancerDB
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  3. vista5040[chr1:213108781-213109180]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5040[chr1:213108781-213109180]
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Tissue distribution of vista5040
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Transcription factor that possibly regulate vista5040[chr1:213108781-213109180]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 213108773 213108782 ZEB1 JASPAR yes 35157268
chr1 213108773 213108782 ZEB1 JASPAR yes 118455777
chr1 213108775 213108783 FOXC1 JASPAR yes 35157269
chr1 213108775 213108783 FOXC1 JASPAR yes 118455778
chr1 213108790 213108810 ESR1 JASPAR yes 35157270
chr1 213108790 213108810 ESR1 JASPAR yes 118455779
chr1 213108791 213108801 RORA JASPAR yes 35157271
chr1 213108791 213108801 RORA JASPAR yes 118455780
chr1 213108793 213108811 ESR1 JASPAR yes 35157272
chr1 213108793 213108811 ESR2 JASPAR yes 35157273
chr1 213108793 213108811 ESR1 JASPAR yes 118455781
chr1 213108793 213108811 ESR2 JASPAR yes 118455782
chr1 213108794 213108811 ESR1 JASPAR yes 35157274
chr1 213108794 213108811 ESR1 JASPAR yes 118455783
chr1 213108795 213108810 ESR2 JASPAR yes 35157275
chr1 213108795 213108810 ESR2 JASPAR yes 118455784
chr1 213108795 213108812 RXRA JASPAR yes 35157276
chr1 213108795 213108812 RXRA JASPAR yes 118455785
chr1 213108795 213108815 ESR1 JASPAR yes 35157277
chr1 213108795 213108815 ESR1 JASPAR yes 118455786
chr1 213108796 213108800 ESR1 TRANSFAC yes 35157278
chr1 213108796 213108800 ESR1 TRANSFAC yes 118455787
chr1 213108831 213108845 EBF1 JASPAR yes 35157279
chr1 213108831 213108845 EBF1 JASPAR yes 118455788
chr1 213108832 213108843 EBF1 JASPAR yes 35157280
chr1 213108832 213108843 EBF1 JASPAR yes 118455789
chr1 213108832 213108851 RFX2 JASPAR yes 35157281
chr1 213108832 213108851 RFX2 JASPAR yes 118455790
chr1 213108834 213108845 STAT3 JASPAR yes 35157282
chr1 213108834 213108845 STAT3 JASPAR yes 118455791
chr1 213108840 213108854 SPI1 JASPAR yes 35157283
chr1 213108840 213108854 SPI1 JASPAR yes 118455792
chr1 213108840 213108855 STAT2 JASPAR yes 35157284
chr1 213108840 213108855 STAT2 JASPAR yes 118455793
chr1 213108855 213108858 MYB TRANSFAC yes 35157285
chr1 213108855 213108858 MYB TRANSFAC yes 118455794
chr1 213108864 213108879 HNF4G JASPAR yes 35157286
chr1 213108864 213108879 HNF4G JASPAR yes 118455795
chr1 213108865 213108879 NR2F1 JASPAR yes 35157287
chr1 213108865 213108879 NR2F1 JASPAR yes 118455796
chr1 213108865 213108880 HNF4A JASPAR yes 35157288
chr1 213108865 213108880 HNF4A JASPAR yes 118455797
chr1 213108869 213108884 HSF1 JASPAR yes 35157289
chr1 213108869 213108884 HSF1 JASPAR yes 118455798
chr1 213108870 213108883 HSF1 JASPAR yes 35157290
chr1 213108870 213108883 HSF2 JASPAR yes 35157291
chr1 213108870 213108883 HSF1 JASPAR yes 118455799
chr1 213108870 213108883 HSF2 JASPAR yes 118455800
chr1 213108874 213108884 ELK1 JASPAR yes 35157292
chr1 213108874 213108884 ELK1 JASPAR yes 118455801
chr1 213108875 213108896 IRF1 JASPAR yes 35157293
chr1 213108875 213108896 IRF1 JASPAR yes 118455802
chr1 213108876 213108886 FLI1 JASPAR yes 35157294
chr1 213108876 213108886 FLI1 JASPAR yes 118455803
chr1 213108878 213108884 ETS1 JASPAR yes 35157295
chr1 213108878 213108884 ETS1 JASPAR yes 118455804
chr1 213108879 213108894 STAT2 JASPAR yes 35157296
chr1 213108879 213108894 STAT2 JASPAR yes 118455805
chr1 213108881 213108902 IRF1 JASPAR yes 35157297
chr1 213108881 213108902 IRF1 JASPAR yes 118455806
chr1 213108884 213108898 IRF7 JASPAR yes 35157298
chr1 213108884 213108898 IRF7 JASPAR yes 118455807
chr1 213108886 213108898 IRF1 JASPAR yes 35157299
chr1 213108886 213108898 IRF1 JASPAR yes 118455808
chr1 213108904 213108915 DMRT3 JASPAR yes 35157300
chr1 213108904 213108915 DMRT3 JASPAR yes 118455809
chr1 213108918 213108922 TEAD2 TRANSFAC yes 35157301
chr1 213108918 213108922 TEAD2 TRANSFAC yes 118455810
chr1 213108920 213108935 PRDM1 JASPAR yes 35157302
chr1 213108920 213108935 PRDM1 JASPAR yes 118455811
chr1 213108920 213108938 IRF2 JASPAR yes 35157303
chr1 213108920 213108938 IRF2 JASPAR yes 118455812
chr1 213108921 213108933 IRF1 JASPAR yes 35157304
chr1 213108921 213108933 IRF1 JASPAR yes 118455813
chr1 213108931 213108936 SP1 TRANSFAC yes 35157305
chr1 213108931 213108936 SP1 TRANSFAC yes 118455814
chr1 213108970 213108987 BCL6B JASPAR yes 35157306
chr1 213108970 213108987 BCL6B JASPAR yes 118455815
chr1 213108981 213108985 YY1 TRANSFAC yes 35157307
chr1 213108981 213108985 YY1 TRANSFAC yes 118455816
chr1 213108993 213109009 SRF JASPAR yes 35157308
chr1 213108993 213109009 SRF JASPAR yes 118455817
chr1 213108996 213109008 SRF JASPAR yes 35157309
chr1 213108996 213109008 SRF JASPAR yes 118455818
chr1 213109011 213109015 YY1 TRANSFAC yes 35157310
chr1 213109011 213109015 YY1 TRANSFAC yes 118455819
chr1 213109014 213109020 TCF1 TRANSFAC yes 35157311
chr1 213109014 213109020 TCF1 TRANSFAC yes 118455820
chr1 213109023 213109027 TEAD2 TRANSFAC yes 35157312
chr1 213109023 213109027 TEAD2 TRANSFAC yes 118455821
chr1 213109028 213109031 MYB TRANSFAC yes 35157313
chr1 213109028 213109031 MYB TRANSFAC yes 118455822
chr1 213109075 213109089 GATA2 JASPAR yes 35157314
chr1 213109075 213109089 GATA2 JASPAR yes 118455823
chr1 213109079 213109087 GATA3 JASPAR yes 35157315
chr1 213109079 213109087 GATA5 JASPAR yes 35157316
chr1 213109079 213109087 GATA3 JASPAR yes 118455824
chr1 213109079 213109087 GATA5 JASPAR yes 118455825
chr1 213109101 213109108 NFATC2 JASPAR yes 35157317
chr1 213109101 213109108 NFATC2 JASPAR yes 118455826
chr1 213109119 213109123 ESR1 TRANSFAC yes 35157318
chr1 213109119 213109123 ESR1 TRANSFAC yes 118455827
chr1 213109119 213109131 NHLH1 JASPAR yes 35157319
chr1 213109119 213109131 NHLH1 JASPAR yes 118455828
chr1 213109120 213109130 NHLH1 JASPAR yes 35157320
chr1 213109120 213109130 NHLH1 JASPAR yes 118455829
chr1 213109141 213109158 RARA JASPAR yes 35157321
chr1 213109141 213109158 RARA JASPAR yes 118455830
chr1 213109167 213109171 ESR1 TRANSFAC yes 35157322
chr1 213109167 213109171 ESR1 TRANSFAC yes 118455831
chr1 213109171 213109181 SREBF1 JASPAR yes 35157323
chr1 213109171 213109181 SREBF2 JASPAR yes 35157324
chr1 213109171 213109181 SREBF1 JASPAR yes 118455832
chr1 213109171 213109181 SREBF2 JASPAR yes 118455833
chr1 213109176 213109189 POU2F2 JASPAR yes 35157325
chr1 213109176 213109189 POU2F2 JASPAR yes 118455834
chr1 213109176 213109197 ZNF263 JASPAR yes 35157326
chr1 213109176 213109197 ZNF263 JASPAR yes 118455835
chr1 213109178 213109182 YY1 TRANSFAC yes 35157327
chr1 213109178 213109182 YY1 TRANSFAC yes 118455836
SNP sites on vista5040[chr1:213108781-213109180]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 213108915 rs191705245 T A
DMRT3
926457
chr1 213108916 rs183409068 G C no 926458
chr1 213108943 rs187874922 T A no 926459
chr1 213108970 rs2101877 A G
BCL6B
926460
chr1 213108977 rs533448356 C T
BCL6B
926461
chr1 213108998 rs149761931 C A
SRF
926462
chr1 213109069 rs73084220 G A no 926463
chr1 213109096 rs3124665 G A no 926464
chr1 213109168 rs74140526 G A,C
ESR1
926465
Genes possibly regulated by vista5040[chr1:213108781-213109180]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 213003483 213020991 - C1orf227 ENSG00000185523.6 213020991 0.81 0.9 1833 12210
chr1 213031597 213072705 + FLVCR1 ENSG00000162769.8 213031597 0.79 1.0 1834 22816
chr1 213123862 213165379 + VASH2 ENSG00000143494.11 213123862 0.87 0.99 1835 85318
chr1 213165524 213189168 - ANGEL2 ENSG00000174606.8 213189168 0.63 0.99 1836 20012
Expression level of Genes
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miRNAs possibly regulated by vista5040[chr1:213108781-213109180]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results