EnhancerDB
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  3. vista50401[chr5:180050392-180050585]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50401[chr5:180050392-180050585]
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Tissue distribution of vista50401
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Transcription factor that possibly regulate vista50401[chr5:180050392-180050585]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180050421 180050441 RREB1 JASPAR yes 70774382
chr5 180050430 180050450 RREB1 JASPAR yes 70774383
chr5 180050431 180050451 RREB1 JASPAR yes 70774384
chr5 180050432 180050442 SP1 JASPAR yes 70774385
chr5 180050432 180050452 RREB1 JASPAR yes 70774386
chr5 180050432 180050453 ZNF263 JASPAR yes 70774387
chr5 180050433 180050453 RREB1 JASPAR yes 70774388
chr5 180050434 180050444 ZNF740 JASPAR yes 70774389
chr5 180050434 180050454 RREB1 JASPAR yes 70774390
chr5 180050435 180050455 RREB1 JASPAR yes 70774391
chr5 180050436 180050456 RREB1 JASPAR yes 70774392
chr5 180050437 180050457 RREB1 JASPAR yes 70774393
chr5 180050438 180050458 RREB1 JASPAR yes 70774394
chr5 180050442 180050452 SP1 JASPAR yes 70774395
chr5 180050443 180050453 SP1 JASPAR yes 70774396
chr5 180050443 180050462 CTCF JASPAR yes 70774397
chr5 180050446 180050460 GLIS2 JASPAR yes 70774398
chr5 180050446 180050460 ZIC1 JASPAR yes 70774399
chr5 180050446 180050461 ZIC4 JASPAR yes 70774400
chr5 180050449 180050461 NHLH1 JASPAR yes 70774401
chr5 180050454 180050463 HIC2 JASPAR yes 70774402
chr5 180050457 180050461 LFA1 TRANSFAC yes 70774403
chr5 180050459 180050470 ELK4 JASPAR yes 70774404
chr5 180050459 180050470 FLI1 JASPAR yes 70774405
chr5 180050460 180050470 ELK1 JASPAR yes 70774406
chr5 180050460 180050470 ELK3 JASPAR yes 70774407
chr5 180050460 180050470 ERF JASPAR yes 70774408
chr5 180050460 180050470 ERG JASPAR yes 70774409
chr5 180050460 180050470 ETS1 JASPAR yes 70774410
chr5 180050460 180050470 ETV1 JASPAR yes 70774411
chr5 180050460 180050470 ETV3 JASPAR yes 70774412
chr5 180050460 180050470 ETV4 JASPAR yes 70774413
chr5 180050460 180050470 ETV6 JASPAR yes 70774414
chr5 180050460 180050470 FEV JASPAR yes 70774415
chr5 180050460 180050470 FLI1 JASPAR yes 70774416
chr5 180050460 180050470 GABPA JASPAR yes 70774417
chr5 180050460 180050471 ETV2 JASPAR yes 70774418
chr5 180050460 180050473 ELF1 JASPAR yes 70774419
chr5 180050461 180050468 SPI1 JASPAR yes 70774420
chr5 180050461 180050469 EHF JASPAR yes 70774421
chr5 180050461 180050469 FEV JASPAR yes 70774422
chr5 180050466 180050470 NFE TRANSFAC yes 70774423
chr5 180050478 180050491 ELF1 JASPAR yes 70774424
chr5 180050480 180050491 ELF5 JASPAR yes 70774425
chr5 180050481 180050491 GABPA JASPAR yes 70774426
chr5 180050481 180050492 ELK4 JASPAR yes 70774427
chr5 180050481 180050492 FLI1 JASPAR yes 70774428
chr5 180050497 180050508 TBX20 JASPAR yes 70774429
chr5 180050498 180050506 TBX5 JASPAR yes 70774430
chr5 180050504 180050525 IRF1 JASPAR yes 70774431
chr5 180050506 180050517 FOXP2 JASPAR yes 70774432
chr5 180050507 180050515 FOXO3 JASPAR yes 70774433
chr5 180050508 180050522 SPI1 JASPAR yes 70774434
chr5 180050508 180050522 SPIC JASPAR yes 70774435
chr5 180050508 180050523 STAT2 JASPAR yes 70774436
chr5 180050509 180050522 ELF1 JASPAR yes 70774437
chr5 180050510 180050522 EHF JASPAR yes 70774438
chr5 180050510 180050522 ELF1 JASPAR yes 70774439
chr5 180050510 180050522 ELF4 JASPAR yes 70774440
chr5 180050510 180050523 ELF3 JASPAR yes 70774441
chr5 180050511 180050522 ELF5 JASPAR yes 70774442
chr5 180050511 180050522 ETV2 JASPAR yes 70774443
chr5 180050511 180050522 SPDEF JASPAR yes 70774444
chr5 180050512 180050522 ELK1 JASPAR yes 70774445
chr5 180050512 180050522 ELK3 JASPAR yes 70774446
chr5 180050512 180050522 ERF JASPAR yes 70774447
chr5 180050512 180050522 ERG JASPAR yes 70774448
chr5 180050512 180050522 ETS1 JASPAR yes 70774449
chr5 180050512 180050522 ETV1 JASPAR yes 70774450
chr5 180050512 180050522 ETV3 JASPAR yes 70774451
chr5 180050512 180050522 ETV4 JASPAR yes 70774452
chr5 180050512 180050522 ETV6 JASPAR yes 70774453
chr5 180050512 180050522 FEV JASPAR yes 70774454
chr5 180050512 180050522 FLI1 JASPAR yes 70774455
chr5 180050512 180050522 GABPA JASPAR yes 70774456
chr5 180050512 180050523 ELK4 JASPAR yes 70774457
chr5 180050512 180050523 FLI1 JASPAR yes 70774458
chr5 180050513 180050521 EHF JASPAR yes 70774459
chr5 180050513 180050521 FEV JASPAR yes 70774460
chr5 180050514 180050521 SPI1 JASPAR yes 70774461
chr5 180050524 180050535 ELF5 JASPAR yes 70774462
chr5 180050525 180050531 PEA3 TRANSFAC yes 70774463
chr5 180050525 180050535 ETV6 JASPAR yes 70774464
chr5 180050525 180050536 FLI1 JASPAR yes 70774465
chr5 180050526 180050534 EHF JASPAR yes 70774466
chr5 180050527 180050534 SPI1 JASPAR yes 70774467
chr5 180050540 180050546 LEF1 TRANSFAC yes 70774468
chr5 180050540 180050546 SOX10 JASPAR yes 70774469
chr5 180050565 180050580 TFAP2C JASPAR yes 70774470
chr5 180050567 180050579 INSM1 JASPAR yes 70774471
chr5 180050567 180050579 TFAP2A JASPAR yes 70774472
chr5 180050567 180050579 TFAP2B JASPAR yes 70774473
chr5 180050567 180050579 TFAP2C JASPAR yes 70774474
chr5 180050567 180050582 TFAP2A JASPAR yes 70774475
chr5 180050569 180050578 TFAP2A JASPAR yes 70774476
SNP sites on vista50401[chr5:180050392-180050585]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista50401[chr5:180050392-180050585]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180017103 180018540 - SCGB3A1 ENSG00000161055.3 180018540 0.99 0.94 6078 68148
chr5 180028506 180076624 - FLT4 ENSG00000037280.11 180076624 0.86 0.98 6079 73961
Expression level of Genes
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miRNAs possibly regulated by vista50401[chr5:180050392-180050585]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results