EnhancerDB
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  3. vista50402[chr5:180072090-180072427]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50402[chr5:180072090-180072427]
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Tissue distribution of vista50402
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Transcription factor that possibly regulate vista50402[chr5:180072090-180072427]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180072109 180072123 GATA2 JASPAR yes 68217620
chr5 180072109 180072123 GATA2 JASPAR yes 70774477
chr5 180072113 180072121 GATA3 JASPAR yes 68217621
chr5 180072113 180072121 GATA3 JASPAR yes 70774478
chr5 180072117 180072137 RREB1 JASPAR yes 68217622
chr5 180072117 180072137 RREB1 JASPAR yes 70774479
chr5 180072118 180072138 RREB1 JASPAR yes 68217623
chr5 180072118 180072138 RREB1 JASPAR yes 70774480
chr5 180072119 180072139 RREB1 JASPAR yes 68217624
chr5 180072119 180072139 RREB1 JASPAR yes 70774481
chr5 180072121 180072141 RREB1 JASPAR yes 68217625
chr5 180072121 180072141 RREB1 JASPAR yes 70774482
chr5 180072130 180072140 ZNF740 JASPAR yes 68217626
chr5 180072130 180072140 ZNF740 JASPAR yes 70774483
chr5 180072131 180072141 ZNF740 JASPAR yes 68217627
chr5 180072131 180072141 ZNF740 JASPAR yes 70774484
chr5 180072132 180072142 ZNF740 JASPAR yes 68217628
chr5 180072132 180072142 ZNF740 JASPAR yes 70774485
chr5 180072134 180072145 NFKB1 JASPAR yes 68217629
chr5 180072134 180072145 NFKB1 JASPAR yes 70774486
chr5 180072137 180072142 SP1 TRANSFAC yes 68217630
chr5 180072137 180072142 SP1 TRANSFAC yes 70774487
chr5 180072139 180072152 TFAP2A JASPAR yes 68217631
chr5 180072139 180072152 TFAP2B JASPAR yes 68217632
chr5 180072139 180072152 TFAP2C JASPAR yes 68217633
chr5 180072139 180072152 TFAP2A JASPAR yes 70774488
chr5 180072139 180072152 TFAP2B JASPAR yes 70774489
chr5 180072139 180072152 TFAP2C JASPAR yes 70774490
chr5 180072139 180072154 TFAP2C JASPAR yes 68217634
chr5 180072139 180072154 TFAP2C JASPAR yes 70774491
chr5 180072152 180072156 YY1 TRANSFAC yes 68217635
chr5 180072152 180072156 YY1 TRANSFAC yes 70774492
chr5 180072164 180072177 TFAP2A JASPAR yes 68217636
chr5 180072164 180072177 TFAP2B JASPAR yes 68217637
chr5 180072164 180072177 TFAP2C JASPAR yes 68217638
chr5 180072164 180072177 TFAP2A JASPAR yes 70774493
chr5 180072164 180072177 TFAP2B JASPAR yes 70774494
chr5 180072164 180072177 TFAP2C JASPAR yes 70774495
chr5 180072172 180072176 LFA1 TRANSFAC yes 68217639
chr5 180072172 180072176 LFA1 TRANSFAC yes 70774496
chr5 180072185 180072200 HSF1 JASPAR yes 68217640
chr5 180072185 180072200 HSF1 JASPAR yes 70774497
chr5 180072186 180072199 HSF1 JASPAR yes 68217641
chr5 180072186 180072199 HSF2 JASPAR yes 68217642
chr5 180072186 180072199 HSF1 JASPAR yes 70774498
chr5 180072186 180072199 HSF2 JASPAR yes 70774499
chr5 180072189 180072200 STAT3 JASPAR yes 68217643
chr5 180072189 180072200 STAT3 JASPAR yes 70774500
chr5 180072190 180072205 HSF1 JASPAR yes 68217644
chr5 180072190 180072205 HSF1 JASPAR yes 70774501
chr5 180072191 180072204 HSF1 JASPAR yes 68217645
chr5 180072191 180072204 HSF2 JASPAR yes 68217646
chr5 180072191 180072204 HSF4 JASPAR yes 68217647
chr5 180072191 180072204 HSF1 JASPAR yes 70774502
chr5 180072191 180072204 HSF2 JASPAR yes 70774503
chr5 180072191 180072204 HSF4 JASPAR yes 70774504
chr5 180072195 180072210 HSF1 JASPAR yes 68217648
chr5 180072195 180072210 HSF1 JASPAR yes 70774505
chr5 180072196 180072209 HSF1 JASPAR yes 68217649
chr5 180072196 180072209 HSF2 JASPAR yes 68217650
chr5 180072196 180072209 HSF4 JASPAR yes 68217651
chr5 180072196 180072209 HSF1 JASPAR yes 70774506
chr5 180072196 180072209 HSF2 JASPAR yes 70774507
chr5 180072196 180072209 HSF4 JASPAR yes 70774508
chr5 180072204 180072212 FOXO3 JASPAR yes 68217652
chr5 180072204 180072212 FOXO3 JASPAR yes 70774509
chr5 180072211 180072220 SP1 TRANSFAC yes 68217653
chr5 180072211 180072220 SP1 TRANSFAC yes 70774510
chr5 180072217 180072238 ZNF263 JASPAR yes 68217654
chr5 180072217 180072238 ZNF263 JASPAR yes 70774511
chr5 180072220 180072231 DUX4 JASPAR yes 68217655
chr5 180072220 180072231 DUX4 JASPAR yes 70774512
chr5 180072269 180072282 TFAP2A JASPAR yes 68217656
chr5 180072269 180072282 TFAP2B JASPAR yes 68217657
chr5 180072269 180072282 TFAP2C JASPAR yes 68217658
chr5 180072269 180072282 TFAP2A JASPAR yes 70774513
chr5 180072269 180072282 TFAP2B JASPAR yes 70774514
chr5 180072269 180072282 TFAP2C JASPAR yes 70774515
chr5 180072275 180072285 ZNF740 JASPAR yes 68217659
chr5 180072275 180072285 ZNF740 JASPAR yes 70774516
chr5 180072280 180072301 ZNF263 JASPAR yes 68217660
chr5 180072280 180072301 ZNF263 JASPAR yes 70774517
chr5 180072291 180072301 SP1 JASPAR yes 68217661
chr5 180072291 180072301 SP1 JASPAR yes 70774518
chr5 180072292 180072299 CEBPA TRANSFAC yes 68217662
chr5 180072292 180072299 CEBPA TRANSFAC yes 70774519
chr5 180072298 180072303 SP1 TRANSFAC yes 68217663
chr5 180072298 180072303 SP1 TRANSFAC yes 70774520
chr5 180072306 180072316 NHLH1 JASPAR yes 68217664
chr5 180072306 180072316 NHLH1 JASPAR yes 70774521
chr5 180072334 180072346 TFAP2A JASPAR yes 68217665
chr5 180072334 180072346 TFAP2B JASPAR yes 68217666
chr5 180072334 180072346 TFAP2C JASPAR yes 68217667
chr5 180072334 180072346 TFAP2A JASPAR yes 70774522
chr5 180072334 180072346 TFAP2B JASPAR yes 70774523
chr5 180072334 180072346 TFAP2C JASPAR yes 70774524
chr5 180072339 180072358 PAX5 JASPAR yes 68217668
chr5 180072339 180072358 PAX5 JASPAR yes 70774525
chr5 180072341 180072345 LFA1 TRANSFAC yes 68217669
chr5 180072341 180072345 LFA1 TRANSFAC yes 70774526
chr5 180072373 180072379 ETS1 JASPAR yes 68217670
chr5 180072373 180072379 SPI1 JASPAR yes 68217671
chr5 180072373 180072379 ETS1 JASPAR yes 70774527
chr5 180072373 180072379 SPI1 JASPAR yes 70774528
chr5 180072382 180072386 ESR1 TRANSFAC yes 68217672
chr5 180072382 180072386 ESR1 TRANSFAC yes 70774529
SNP sites on vista50402[chr5:180072090-180072427]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180072239 rs73812646 C T no 8749715
chr5 180072249 rs192522150 G A no 8749716
chr5 180072275 rs73812647 C T
TFAP2A TFAP2B TFAP2C ZNF740
8749717
chr5 180072285 rs73812648 G C
ZNF263 ZNF740
8749718
chr5 180072322 rs62407089 C T no 8749719
chr5 180072332 rs116722413 G A no 8749720
Genes possibly regulated by vista50402[chr5:180072090-180072427]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180017103 180018540 - SCGB3A1 ENSG00000161055.3 180018540 0.99 0.94 6078 46450
chr5 180028506 180076624 - FLT4 ENSG00000037280.11 180076624 0.86 0.98 6079 95803
chr5 180166042 180167099 - OR2Y1 ENSG00000174339.2 180167099 1.0 0.0 6080 5328
Expression level of Genes
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miRNAs possibly regulated by vista50402[chr5:180072090-180072427]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results