EnhancerDB
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  3. vista50403[chr5:180072728-180073107]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50403[chr5:180072728-180073107]
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Tissue distribution of vista50403
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Transcription factor that possibly regulate vista50403[chr5:180072728-180073107]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180072727 180072738 GCM1 JASPAR yes 68217714
chr5 180072727 180072738 GCM1 JASPAR yes 70774530
chr5 180072727 180072748 ZNF263 JASPAR yes 68217715
chr5 180072727 180072748 ZNF263 JASPAR yes 70774531
chr5 180072728 180072738 GCM2 JASPAR yes 68217716
chr5 180072728 180072738 GCM2 JASPAR yes 70774532
chr5 180072735 180072748 ELF1 JASPAR yes 68217717
chr5 180072735 180072748 ELF1 JASPAR yes 70774533
chr5 180072753 180072757 NFE TRANSFAC yes 68217718
chr5 180072753 180072757 NFE TRANSFAC yes 70774534
chr5 180072756 180072773 RARA JASPAR yes 68217719
chr5 180072756 180072773 RARA JASPAR yes 70774535
chr5 180072767 180072777 ELK1 JASPAR yes 68217720
chr5 180072767 180072777 ELK1 JASPAR yes 70774536
chr5 180072769 180072778 ELK4 JASPAR yes 68217721
chr5 180072769 180072778 ELK4 JASPAR yes 70774537
chr5 180072771 180072777 ETS1 JASPAR yes 68217722
chr5 180072771 180072777 ETS1 JASPAR yes 70774538
chr5 180072771 180072782 NFKB1 JASPAR yes 68217723
chr5 180072771 180072782 NFKB1 JASPAR yes 70774539
chr5 180072772 180072782 RELA JASPAR yes 68217724
chr5 180072772 180072782 REL JASPAR yes 68217725
chr5 180072772 180072782 RELA JASPAR yes 70774540
chr5 180072772 180072782 REL JASPAR yes 70774541
chr5 180072788 180072795 SPIB JASPAR yes 68217726
chr5 180072788 180072795 SPIB JASPAR yes 70774542
chr5 180072869 180072881 INSM1 JASPAR yes 68217727
chr5 180072869 180072881 INSM1 JASPAR yes 70774543
chr5 180072875 180072886 TBX2 JASPAR yes 68217728
chr5 180072875 180072886 TBX2 JASPAR yes 70774544
chr5 180072876 180072884 MGA JASPAR yes 68217729
chr5 180072876 180072884 TBX15 JASPAR yes 68217730
chr5 180072876 180072884 TBX1 JASPAR yes 68217731
chr5 180072876 180072884 TBX4 JASPAR yes 68217732
chr5 180072876 180072884 TBX5 JASPAR yes 68217733
chr5 180072876 180072884 MGA JASPAR yes 70774545
chr5 180072876 180072884 TBX15 JASPAR yes 70774546
chr5 180072876 180072884 TBX1 JASPAR yes 70774547
chr5 180072876 180072884 TBX4 JASPAR yes 70774548
chr5 180072876 180072884 TBX5 JASPAR yes 70774549
chr5 180072897 180072907 SP1 JASPAR yes 68217734
chr5 180072897 180072907 SP1 JASPAR yes 70774550
chr5 180072897 180072918 ZNF263 JASPAR yes 68217735
chr5 180072897 180072918 ZNF263 JASPAR yes 70774551
chr5 180072904 180072914 SP1 JASPAR yes 68217736
chr5 180072904 180072914 SP1 JASPAR yes 70774552
chr5 180072910 180072920 ZNF740 JASPAR yes 68217737
chr5 180072910 180072920 ZNF740 JASPAR yes 70774553
chr5 180072927 180072931 LFA1 TRANSFAC yes 68217738
chr5 180072927 180072931 LFA1 TRANSFAC yes 70774554
chr5 180072947 180072951 LFA1 TRANSFAC yes 68217739
chr5 180072947 180072951 LFA1 TRANSFAC yes 70774555
chr5 180072987 180072993 PEA3 TRANSFAC yes 68217740
chr5 180072987 180072993 PEA3 TRANSFAC yes 70774556
chr5 180073049 180073062 DUXA JASPAR yes 68217741
chr5 180073049 180073062 DUXA JASPAR yes 70774557
chr5 180073050 180073061 DUX4 JASPAR yes 68217742
chr5 180073050 180073061 DUX4 JASPAR yes 70774558
chr5 180073072 180073093 ZNF263 JASPAR yes 68217743
chr5 180073072 180073093 ZNF263 JASPAR yes 70774559
chr5 180073073 180073087 PLAG1 JASPAR yes 68217744
chr5 180073073 180073087 PLAG1 JASPAR yes 70774560
chr5 180073075 180073085 SP1 JASPAR yes 68217745
chr5 180073075 180073085 SP1 JASPAR yes 70774561
chr5 180073085 180073102 ZNF410 JASPAR yes 68217746
chr5 180073085 180073102 ZNF410 JASPAR yes 70774562
chr5 180073086 180073090 NFE TRANSFAC yes 68217747
chr5 180073086 180073090 NFE TRANSFAC yes 70774563
chr5 180073088 180073104 ZNF143 JASPAR yes 68217748
chr5 180073088 180073104 ZNF143 JASPAR yes 70774564
chr5 180073099 180073108 NKX2-8 JASPAR yes 68217749
chr5 180073099 180073108 NKX2-8 JASPAR yes 70774565
chr5 180073099 180073109 NKX2-3 JASPAR yes 68217750
chr5 180073099 180073109 NKX2-3 JASPAR yes 70774566
chr5 180073105 180073126 ZNF263 JASPAR yes 68217751
chr5 180073105 180073126 ZNF263 JASPAR yes 70774567
SNP sites on vista50403[chr5:180072728-180073107]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180072851 rs6869846 T A no 8749728
Genes possibly regulated by vista50403[chr5:180072728-180073107]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180017103 180018540 - SCGB3A1 ENSG00000161055.3 180018540 0.99 0.94 6078 45812
chr5 180028506 180076624 - FLT4 ENSG00000037280.11 180076624 0.86 0.98 6079 96483
chr5 180166042 180167099 - OR2Y1 ENSG00000174339.2 180167099 1.0 0.0 6080 6008
Expression level of Genes
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miRNAs possibly regulated by vista50403[chr5:180072728-180073107]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results