EnhancerDB
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  3. vista50406[chr5:180116464-180116653]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50406[chr5:180116464-180116653]
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Tissue distribution of vista50406
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Transcription factor that possibly regulate vista50406[chr5:180116464-180116653]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180116461 180116472 CDX2 JASPAR yes 68219775
chr5 180116461 180116472 CDX2 JASPAR yes 70774635
chr5 180116470 180116476 HiNF-A TRANSFAC yes 68219776
chr5 180116470 180116476 HiNF-A TRANSFAC yes 70774636
chr5 180116481 180116491 BARHL2 JASPAR yes 68219777
chr5 180116481 180116491 BARHL2 JASPAR yes 70774637
chr5 180116502 180116513 ELK4 JASPAR yes 68219778
chr5 180116502 180116513 FLI1 JASPAR yes 68219779
chr5 180116502 180116513 ELK4 JASPAR yes 70774638
chr5 180116502 180116513 FLI1 JASPAR yes 70774639
chr5 180116503 180116507 YY1 TRANSFAC yes 68219780
chr5 180116503 180116507 YY1 TRANSFAC yes 70774640
chr5 180116503 180116513 ERF JASPAR yes 68219781
chr5 180116503 180116513 ERG JASPAR yes 68219782
chr5 180116503 180116513 ETS1 JASPAR yes 68219783
chr5 180116503 180116513 FEV JASPAR yes 68219784
chr5 180116503 180116513 FLI1 JASPAR yes 68219785
chr5 180116503 180116513 ERF JASPAR yes 70774641
chr5 180116503 180116513 ERG JASPAR yes 70774642
chr5 180116503 180116513 ETS1 JASPAR yes 70774643
chr5 180116503 180116513 FEV JASPAR yes 70774644
chr5 180116503 180116513 FLI1 JASPAR yes 70774645
chr5 180116503 180116514 ETV2 JASPAR yes 68219786
chr5 180116503 180116514 ETV2 JASPAR yes 70774646
chr5 180116503 180116516 ELF1 JASPAR yes 68219787
chr5 180116503 180116516 ELF1 JASPAR yes 70774647
chr5 180116504 180116512 FEV JASPAR yes 68219788
chr5 180116504 180116512 FEV JASPAR yes 70774648
chr5 180116545 180116559 TCF7L2 JASPAR yes 68219789
chr5 180116545 180116559 TCF7L2 JASPAR yes 70774649
chr5 180116550 180116559 NKX2-8 JASPAR yes 68219790
chr5 180116550 180116559 NKX2-8 JASPAR yes 70774650
chr5 180116550 180116560 NKX2-3 JASPAR yes 68219791
chr5 180116550 180116560 NKX2-3 JASPAR yes 70774651
chr5 180116571 180116584 ZBTB18 JASPAR yes 68219792
chr5 180116571 180116584 ZBTB18 JASPAR yes 70774652
chr5 180116580 180116595 MEF2A JASPAR yes 68219793
chr5 180116580 180116595 MEF2A JASPAR yes 70774653
chr5 180116584 180116588 YY1 TRANSFAC yes 68219794
chr5 180116584 180116588 YY1 TRANSFAC yes 70774654
chr5 180116596 180116601 SP1 TRANSFAC yes 68219795
chr5 180116596 180116601 SP1 TRANSFAC yes 70774655
chr5 180116600 180116621 ZNF263 JASPAR yes 68219796
chr5 180116600 180116621 ZNF263 JASPAR yes 70774656
chr5 180116629 180116635 SOX10 JASPAR yes 68219797
chr5 180116629 180116635 SOX10 JASPAR yes 70774657
chr5 180116635 180116641 SOX10 JASPAR yes 68219798
chr5 180116635 180116641 SOX10 JASPAR yes 70774658
chr5 180116651 180116654 MYB TRANSFAC yes 68219799
chr5 180116651 180116654 MYB TRANSFAC yes 70774659
SNP sites on vista50406[chr5:180116464-180116653]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180116557 rs73349276 T G
NKX2-3 NKX2-8 TCF7L2
8749993
Genes possibly regulated by vista50406[chr5:180116464-180116653]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180017103 180018540 - SCGB3A1 ENSG00000161055.3 180018540 0.99 0.94 6078 2076
chr5 180028506 180076624 - FLT4 ENSG00000037280.11 180076624 0.86 0.98 6079 60160
chr5 180166042 180167099 - OR2Y1 ENSG00000174339.2 180167099 1.0 0.0 6080 49554
Expression level of Genes
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miRNAs possibly regulated by vista50406[chr5:180116464-180116653]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results