EnhancerDB
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  3. vista50408[chr5:180244883-180245420]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50408[chr5:180244883-180245420]
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Tissue distribution of vista50408
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Transcription factor that possibly regulate vista50408[chr5:180244883-180245420]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180244932 180245258 ESR1 UCSC Txn Factor no Conserved 108537782
chr5 180244899 180244919 TP63 JASPAR yes 70774744
chr5 180244903 180244908 SP1 TRANSFAC yes 70774745
chr5 180244917 180244927 EMX1 JASPAR yes 70774746
chr5 180244917 180244927 HOXB3 JASPAR yes 70774747
chr5 180244917 180244927 NOTO JASPAR yes 70774748
chr5 180244919 180244933 CREB3L1 JASPAR yes 70774749
chr5 180244920 180244924 YY1 TRANSFAC yes 70774750
chr5 180244945 180244951 TBP TRANSFAC yes 70774751
chr5 180244952 180244962 ZNF740 JASPAR yes 70774752
chr5 180244956 180244963 SP1 TRANSFAC yes 70774753
chr5 180244956 180244966 SP1 JASPAR yes 70774754
chr5 180244957 180244965 SP1 TRANSFAC yes 70774755
chr5 180244958 180244963 SP1 TRANSFAC yes 70774756
chr5 180244959 180244964 SP1 TRANSFAC yes 70774757
chr5 180244959 180244968 HIC2 JASPAR yes 70774758
chr5 180244962 180244966 LFA1 TRANSFAC yes 70774759
chr5 180244977 180244993 POU4F3 JASPAR yes 70774760
chr5 180244979 180244993 POU4F1 JASPAR yes 70774761
chr5 180244979 180244994 HNF1A JASPAR yes 70774762
chr5 180244980 180244993 HNF1B JASPAR yes 70774763
chr5 180244980 180244994 POU4F1 JASPAR yes 70774764
chr5 180244980 180244996 POU4F2 JASPAR yes 70774765
chr5 180244980 180244996 POU4F3 JASPAR yes 70774766
chr5 180245012 180245017 MYC TRANSFAC yes 70774767
chr5 180245035 180245047 NHLH1 JASPAR yes 70774768
chr5 180245036 180245046 NHLH1 JASPAR yes 70774769
chr5 180245050 180245060 SREBF1 JASPAR yes 70774770
chr5 180245050 180245060 SREBF2 JASPAR yes 70774771
chr5 180245051 180245059 MGA JASPAR yes 70774772
chr5 180245056 180245068 HNF1B JASPAR yes 70774773
chr5 180245058 180245068 LHX6 JASPAR yes 70774774
chr5 180245059 180245072 DUXA JASPAR yes 70774775
chr5 180245063 180245080 BCL6B JASPAR yes 70774776
chr5 180245064 180245081 BCL6B JASPAR yes 70774777
chr5 180245066 180245081 RFX5 JASPAR yes 70774778
chr5 180245086 180245097 ESRRA JASPAR yes 70774779
chr5 180245087 180245095 NR4A2 JASPAR yes 70774780
chr5 180245088 180245098 RORA JASPAR yes 70774781
chr5 180245093 180245112 PAX5 JASPAR yes 70774782
chr5 180245114 180245125 PROP1 JASPAR yes 70774783
chr5 180245128 180245140 SRF JASPAR yes 70774784
chr5 180245128 180245148 TP53 JASPAR yes 70774785
chr5 180245129 180245133 YY1 TRANSFAC yes 70774786
chr5 180245131 180245141 RORA JASPAR yes 70774787
chr5 180245133 180245141 CREB1 JASPAR yes 70774788
chr5 180245136 180245140 ESR1 TRANSFAC yes 70774789
chr5 180245145 180245154 HIC2 JASPAR yes 70774790
chr5 180245148 180245152 LFA1 TRANSFAC yes 70774791
chr5 180245172 180245181 NKX2-8 JASPAR yes 70774792
chr5 180245184 180245193 SRY JASPAR yes 70774793
chr5 180245186 180245195 SOX9 JASPAR yes 70774794
chr5 180245192 180245198 NFIC JASPAR yes 70774795
chr5 180245196 180245200 YY1 TRANSFAC yes 70774796
chr5 180245206 180245221 AR JASPAR yes 70774797
chr5 180245227 180245238 FOSL2 JASPAR yes 70774798
chr5 180245256 180245265 ZEB1 JASPAR yes 70774799
chr5 180245274 180245280 JUN TRANSFAC yes 70774800
chr5 180245278 180245284 TBP TRANSFAC yes 70774801
chr5 180245303 180245318 HNF4A JASPAR yes 70774802
chr5 180245308 180245318 NFIA JASPAR yes 70774803
chr5 180245309 180245318 NFIX JASPAR yes 70774804
chr5 180245310 180245316 NFIC JASPAR yes 70774805
chr5 180245324 180245339 RUNX2 JASPAR yes 70774806
chr5 180245344 180245359 NR2C2 JASPAR yes 70774807
chr5 180245345 180245359 NR2F1 JASPAR yes 70774808
chr5 180245345 180245359 RXRB JASPAR yes 70774809
chr5 180245345 180245359 RXRG JASPAR yes 70774810
chr5 180245345 180245360 HNF4A JASPAR yes 70774811
chr5 180245349 180245359 RORA JASPAR yes 70774812
chr5 180245350 180245363 NR2F1 JASPAR yes 70774813
chr5 180245351 180245366 NR2C2 JASPAR yes 70774814
chr5 180245352 180245361 RARB TRANSFAC yes 70774815
chr5 180245354 180245358 ESR1 TRANSFAC yes 70774816
chr5 180245355 180245374 PAX5 JASPAR yes 70774817
chr5 180245361 180245367 YY1 JASPAR yes 70774818
chr5 180245365 180245380 TFAP2A JASPAR yes 70774819
chr5 180245365 180245380 TFAP2C JASPAR yes 70774820
chr5 180245367 180245379 TFAP2A JASPAR yes 70774821
chr5 180245367 180245379 TFAP2B JASPAR yes 70774822
chr5 180245367 180245379 TFAP2C JASPAR yes 70774823
chr5 180245367 180245382 TFAP2A JASPAR yes 70774824
chr5 180245367 180245382 TFAP2C JASPAR yes 70774825
chr5 180245368 180245379 TFAP2A JASPAR yes 70774826
chr5 180245368 180245379 TFAP2B JASPAR yes 70774827
chr5 180245374 180245389 AR JASPAR yes 70774828
chr5 180245374 180245392 ESR2 JASPAR yes 70774829
chr5 180245384 180245396 INSM1 JASPAR yes 70774830
chr5 180245391 180245402 BATF JASPAR yes 70774831
SNP sites on vista50408[chr5:180244883-180245420]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180244905 rs540157567 C T
SP1 TP63
8750541
chr5 180244918 rs193011073 A G
EMX1 HOXB3 NOTO TP63
8750542
chr5 180244961 rs141259882 G A
ESR1 HIC2 SP1 ZNF740
8750543
chr5 180244962 rs79806507 C G,T
ESR1 HIC2 LFA1 SP1 ZNF740
8750544
chr5 180244972 rs79107419 C T
ESR1
8750545
chr5 180245073 rs80116130 A G
BCL6B ESR1 RFX5
8750546
chr5 180245101 rs79550580 A G,T
ESR1 PAX5
8750547
chr5 180245181 rs76287449 G A
ESR1 NKX2-8
8750548
chr5 180245224 rs612882 C T
ESR1
8750549
chr5 180245240 rs62407796 T G
ESR1
8750550
chr5 180245254 rs112132643 A G
ESR1
8750551
chr5 180245272 rs372784958 T C,G no 8750552
chr5 180245279 rs569785027 T TA
JUN TBP
8750553
chr5 180245325 rs78013250 A G
RUNX2
8750554
chr5 180245388 rs183460244 C A,T
AR ESR2 INSM1
8750555
chr5 180245415 rs7714616 A G no 8750556
Genes possibly regulated by vista50408[chr5:180244883-180245420]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180166042 180167099 - OR2Y1 ENSG00000174339.2 180167099 1.0 0.0 6080 22216
chr5 180217541 180242652 - MGAT1 ENSG00000131446.11 180242652 0.61 1.0 6081 97769
chr5 180274611 180288286 - ZFP62 ENSG00000196670.9 180288286 0.74 0.99 6082 57134
chr5 180326077 180377906 + BTNL8 ENSG00000113303.7 180326077 0.89 0.88 6083 19343
Expression level of Genes
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miRNAs possibly regulated by vista50408[chr5:180244883-180245420]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results