EnhancerDB
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  3. vista50409[chr5:180247876-180248417]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50409[chr5:180247876-180248417]
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Tissue distribution of vista50409
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Transcription factor that possibly regulate vista50409[chr5:180247876-180248417]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180247885 180247900 AR JASPAR yes 70774832
chr5 180247897 180247903 SOX10 JASPAR yes 70774833
chr5 180247914 180247920 ESR1 TRANSFAC yes 70774834
chr5 180247916 180247920 ESR1 TRANSFAC yes 70774835
chr5 180247917 180247937 TBX19 JASPAR yes 70774836
chr5 180247919 180247935 T JASPAR yes 70774837
chr5 180247922 180247935 ZBTB18 JASPAR yes 70774838
chr5 180247924 180247934 FIGLA JASPAR yes 70774839
chr5 180247924 180247934 ID4 JASPAR yes 70774840
chr5 180247924 180247934 TCF3 JASPAR yes 70774841
chr5 180247924 180247934 TCF4 JASPAR yes 70774842
chr5 180247927 180247935 MGA JASPAR yes 70774843
chr5 180247927 180247935 TBX15 JASPAR yes 70774844
chr5 180247927 180247935 TBX1 JASPAR yes 70774845
chr5 180247927 180247935 TBX4 JASPAR yes 70774846
chr5 180247927 180247935 TBX5 JASPAR yes 70774847
chr5 180247928 180247940 IRF1 JASPAR yes 70774848
chr5 180247934 180247947 EOMES JASPAR yes 70774849
chr5 180247936 180247946 TBR1 JASPAR yes 70774850
chr5 180247936 180247947 TBX20 JASPAR yes 70774851
chr5 180247936 180247947 TBX2 JASPAR yes 70774852
chr5 180247936 180247956 TBX19 JASPAR yes 70774853
chr5 180247947 180247956 ZEB1 JASPAR yes 70774854
chr5 180247955 180247965 RELA JASPAR yes 70774855
chr5 180247962 180247975 HSF2 JASPAR yes 70774856
chr5 180247966 180247981 HSF1 JASPAR yes 70774857
chr5 180247967 180247980 HSF2 JASPAR yes 70774858
chr5 180247990 180247998 SP1 TRANSFAC yes 70774859
chr5 180248026 180248031 ETS2 TRANSFAC yes 70774860
chr5 180248037 180248047 RELA JASPAR yes 70774861
chr5 180248037 180248048 NFKB1 JASPAR yes 70774862
chr5 180248131 180248135 LFA1 TRANSFAC yes 70774863
chr5 180248143 180248147 NFE TRANSFAC yes 70774864
chr5 180248154 180248164 TFEB JASPAR yes 70774865
chr5 180248154 180248164 TFEC JASPAR yes 70774866
chr5 180248154 180248165 USF1 JASPAR yes 70774867
chr5 180248154 180248165 USF2 JASPAR yes 70774868
chr5 180248155 180248165 MAX JASPAR yes 70774869
chr5 180248166 180248172 TCF4 TRANSFAC yes 70774870
chr5 180248166 180248178 FOXI1 JASPAR yes 70774871
chr5 180248166 180248181 FOXP1 JASPAR yes 70774872
chr5 180248167 180248178 FOXP2 JASPAR yes 70774873
chr5 180248167 180248179 FOXC2 JASPAR yes 70774874
chr5 180248167 180248181 FOXF2 JASPAR yes 70774875
chr5 180248168 180248176 FOXG1 JASPAR yes 70774876
chr5 180248168 180248176 FOXO3 JASPAR yes 70774877
chr5 180248173 180248177 YY1 TRANSFAC yes 70774878
chr5 180248178 180248196 SRF JASPAR yes 70774879
chr5 180248179 180248184 ETS2 TRANSFAC yes 70774880
chr5 180248189 180248194 ETS2 TRANSFAC yes 70774881
chr5 180248192 180248208 SOX4 JASPAR yes 70774882
chr5 180248217 180248222 ATF1 TRANSFAC yes 70774883
chr5 180248217 180248225 CREB1 JASPAR yes 70774884
chr5 180248217 180248225 GMEB2 JASPAR yes 70774885
chr5 180248260 180248264 TEAD2 TRANSFAC yes 70774886
chr5 180248262 180248265 MYB TRANSFAC yes 70774887
chr5 180248270 180248280 TFEC JASPAR yes 70774888
chr5 180248295 180248302 NKX3-1 JASPAR yes 70774889
chr5 180248301 180248315 SPI1 JASPAR yes 70774890
chr5 180248301 180248315 SPIC JASPAR yes 70774891
chr5 180248302 180248315 ELF1 JASPAR yes 70774892
chr5 180248303 180248324 IRF1 JASPAR yes 70774893
chr5 180248305 180248312 SPIB JASPAR yes 70774894
chr5 180248315 180248330 FOXA1 JASPAR yes 70774895
chr5 180248317 180248329 FOXC2 JASPAR yes 70774896
chr5 180248318 180248326 FOXD1 JASPAR yes 70774897
chr5 180248318 180248326 FOXG1 JASPAR yes 70774898
chr5 180248318 180248326 FOXO3 JASPAR yes 70774899
chr5 180248318 180248329 FOXB1 JASPAR yes 70774900
chr5 180248318 180248329 FOXC1 JASPAR yes 70774901
chr5 180248319 180248326 FOXD2 JASPAR yes 70774902
chr5 180248319 180248326 FOXI1 JASPAR yes 70774903
chr5 180248319 180248326 FOXL1 JASPAR yes 70774904
chr5 180248319 180248326 FOXO4 JASPAR yes 70774905
chr5 180248319 180248326 FOXO6 JASPAR yes 70774906
chr5 180248319 180248326 FOXP3 JASPAR yes 70774907
chr5 180248319 180248327 FOXO3 JASPAR yes 70774908
chr5 180248319 180248330 FOXA1 JASPAR yes 70774909
chr5 180248321 180248339 IRF2 JASPAR yes 70774910
chr5 180248322 180248343 IRF1 JASPAR yes 70774911
chr5 180248324 180248339 PRDM1 JASPAR yes 70774912
chr5 180248324 180248339 STAT2 JASPAR yes 70774913
chr5 180248326 180248338 IRF1 JASPAR yes 70774914
chr5 180248326 180248340 IRF7 JASPAR yes 70774915
chr5 180248326 180248340 IRF8 JASPAR yes 70774916
chr5 180248326 180248341 IRF9 JASPAR yes 70774917
chr5 180248343 180248349 TBP TRANSFAC yes 70774918
chr5 180248349 180248360 STAT1 JASPAR yes 70774919
chr5 180248354 180248358 TEAD2 TRANSFAC yes 70774920
chr5 180248354 180248363 SRY JASPAR yes 70774921
chr5 180248356 180248359 MYB TRANSFAC yes 70774922
chr5 180248357 180248366 VENTX JASPAR yes 70774923
chr5 180248357 180248367 EN2 JASPAR yes 70774924
chr5 180248357 180248367 ESX1 JASPAR yes 70774925
chr5 180248357 180248367 GBX2 JASPAR yes 70774926
chr5 180248358 180248366 BARX1 JASPAR yes 70774927
chr5 180248376 180248392 POU4F3 JASPAR yes 70774928
chr5 180248378 180248393 FOXP1 JASPAR yes 70774929
chr5 180248378 180248393 MEF2C JASPAR yes 70774930
chr5 180248378 180248399 IRF1 JASPAR yes 70774931
chr5 180248379 180248394 MEF2A JASPAR yes 70774932
chr5 180248380 180248392 FOXC2 JASPAR yes 70774933
chr5 180248380 180248392 MEF2A JASPAR yes 70774934
chr5 180248380 180248392 MEF2B JASPAR yes 70774935
chr5 180248380 180248392 MEF2D JASPAR yes 70774936
chr5 180248381 180248391 MEF2A JASPAR yes 70774937
chr5 180248382 180248386 TEAD2 TRANSFAC yes 70774938
chr5 180248382 180248387 TBP TRANSFAC yes 70774939
chr5 180248382 180248388 TMF TRANSFAC yes 70774940
chr5 180248390 180248411 IRF1 JASPAR yes 70774941
chr5 180248392 180248407 STAT2 JASPAR yes 70774942
chr5 180248393 180248407 STAT1 JASPAR yes 70774943
chr5 180248394 180248406 IRF1 JASPAR yes 70774944
chr5 180248394 180248408 IRF7 JASPAR yes 70774945
chr5 180248399 180248403 YY1 TRANSFAC yes 70774946
chr5 180248400 180248410 NFATC3 JASPAR yes 70774947
chr5 180248401 180248408 NFATC2 JASPAR yes 70774948
chr5 180248405 180248409 H1TF2 TRANSFAC yes 70774949
chr5 180248405 180248409 NFE TRANSFAC yes 70774950
chr5 180248405 180248409 SRF TRANSFAC yes 70774951
SNP sites on vista50409[chr5:180247876-180248417]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180247888 rs11249748 C G
AR
8750557
chr5 180248046 rs11249749 C T
NFKB1 RELA
8750558
chr5 180248131 rs148925571 T C
LFA1
8750559
chr5 180248404 rs73815143 T G
IRF1 IRF7 NFATC2 NFATC3 STAT1 STAT2
8750560
Genes possibly regulated by vista50409[chr5:180247876-180248417]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180166042 180167099 - OR2Y1 ENSG00000174339.2 180167099 1.0 0.0 6080 19223
chr5 180217541 180242652 - MGAT1 ENSG00000131446.11 180242652 0.61 1.0 6081 94776
chr5 180274611 180288286 - ZFP62 ENSG00000196670.9 180288286 0.74 0.99 6082 60131
chr5 180326077 180377906 + BTNL8 ENSG00000113303.7 180326077 0.89 0.88 6083 22340
Expression level of Genes
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miRNAs possibly regulated by vista50409[chr5:180247876-180248417]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results