EnhancerDB
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  3. vista50414[chr5:180371458-180371675]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50414[chr5:180371458-180371675]
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Tissue distribution of vista50414
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Transcription factor that possibly regulate vista50414[chr5:180371458-180371675]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180371465 180371478 JUN JASPAR yes 70775143
chr5 180371478 180371493 PRDM1 JASPAR yes 70775144
chr5 180371478 180371493 STAT2 JASPAR yes 70775145
chr5 180371480 180371501 IRF1 JASPAR yes 70775146
chr5 180371493 180371504 RUNX1 JASPAR yes 70775147
chr5 180371565 180371575 MEF2A JASPAR yes 70775148
chr5 180371566 180371578 POU2F1 JASPAR yes 70775149
chr5 180371566 180371581 MEF2C JASPAR yes 70775150
chr5 180371567 180371578 FOXB1 JASPAR yes 70775151
chr5 180371567 180371582 MEF2A JASPAR yes 70775152
chr5 180371568 180371572 YY1 TRANSFAC yes 70775153
chr5 180371568 180371577 POU5F1B JASPAR yes 70775154
chr5 180371568 180371580 MEF2A JASPAR yes 70775155
chr5 180371569 180371578 POU5F1B JASPAR yes 70775156
chr5 180371569 180371579 MEF2A JASPAR yes 70775157
chr5 180371583 180371599 SOX8 JASPAR yes 70775158
chr5 180371613 180371629 RFX2 JASPAR yes 70775159
chr5 180371613 180371629 RFX3 JASPAR yes 70775160
chr5 180371613 180371629 RFX4 JASPAR yes 70775161
chr5 180371615 180371618 MYB TRANSFAC yes 70775162
chr5 180371617 180371629 MEF2B JASPAR yes 70775163
chr5 180371617 180371629 MEF2D JASPAR yes 70775164
chr5 180371619 180371623 TEAD2 TRANSFAC yes 70775165
chr5 180371619 180371629 EVX1 JASPAR yes 70775166
chr5 180371619 180371629 HOXA2 JASPAR yes 70775167
chr5 180371619 180371629 MEOX1 JASPAR yes 70775168
chr5 180371619 180371629 MEOX2 JASPAR yes 70775169
chr5 180371619 180371629 MNX1 JASPAR yes 70775170
chr5 180371627 180371631 H1TF2 TRANSFAC yes 70775171
chr5 180371627 180371631 NFE TRANSFAC yes 70775172
chr5 180371627 180371631 SRF TRANSFAC yes 70775173
chr5 180371631 180371634 MYB TRANSFAC yes 70775174
chr5 180371635 180371646 NFIL3 JASPAR yes 70775175
chr5 180371643 180371658 MEF2C JASPAR yes 70775176
chr5 180371644 180371659 MEF2A JASPAR yes 70775177
chr5 180371645 180371657 MEF2A JASPAR yes 70775178
chr5 180371645 180371657 MEF2D JASPAR yes 70775179
SNP sites on vista50414[chr5:180371458-180371675]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180371504 rs200035035 ACTAGAGGCTGGT A
RUNX1
8751230
chr5 180371569 rs2387720 T C
FOXB1 MEF2A MEF2C POU2F1 POU5F1B YY1
8751231
Genes possibly regulated by vista50414[chr5:180371458-180371675]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180274611 180288286 - ZFP62 ENSG00000196670.9 180288286 0.74 0.99 6082 16828
chr5 180326077 180377906 + BTNL8 ENSG00000113303.7 180326077 0.89 0.88 6083 54619
chr5 180415845 180433727 + BTNL3 ENSG00000168903.8 180415845 0.99 1.0 6084 55830
chr5 180467225 180488523 + BTNL9 ENSG00000165810.12 180467225 0.91 1.0 6085 4450
Expression level of Genes
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miRNAs possibly regulated by vista50414[chr5:180371458-180371675]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results