EnhancerDB
  1. Home
  2. Enhancers
  3. vista50417[chr5:180473265-180473624]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50417[chr5:180473265-180473624]
Back to top
Tissue distribution of vista50417
Back to top
Transcription factor that possibly regulate vista50417[chr5:180473265-180473624]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180473266 180473287 ZNF263 JASPAR yes 70775311
chr5 180473272 180473292 RREB1 JASPAR yes 70775312
chr5 180473272 180473293 ZNF263 JASPAR yes 70775313
chr5 180473275 180473296 ZNF263 JASPAR yes 70775314
chr5 180473281 180473302 ZNF263 JASPAR yes 70775315
chr5 180473296 180473302 MZF1 JASPAR yes 70775316
chr5 180473316 180473337 ZNF263 JASPAR yes 70775317
chr5 180473325 180473346 ZNF263 JASPAR yes 70775318
chr5 180473350 180473365 STAT1 JASPAR yes 70775319
chr5 180473352 180473363 STAT1 JASPAR yes 70775320
chr5 180473352 180473363 STAT3 JASPAR yes 70775321
chr5 180473365 180473376 FOXH1 JASPAR yes 70775322
chr5 180473369 180473375 ZNF354C JASPAR yes 70775323
chr5 180473377 180473392 ZIC3 JASPAR yes 70775324
chr5 180473402 180473413 STAT1 JASPAR yes 70775325
chr5 180473402 180473413 STAT3 JASPAR yes 70775326
chr5 180473408 180473418 RELA JASPAR yes 70775327
chr5 180473461 180473473 INSM1 JASPAR yes 70775328
chr5 180473481 180473497 POU4F3 JASPAR yes 70775329
chr5 180473484 180473490 TCF4 TRANSFAC yes 70775330
chr5 180473494 180473513 CTCF JASPAR yes 70775331
chr5 180473510 180473526 POU4F2 JASPAR yes 70775332
chr5 180473510 180473526 POU4F3 JASPAR yes 70775333
chr5 180473512 180473526 POU4F1 JASPAR yes 70775334
chr5 180473518 180473532 RXRB JASPAR yes 70775335
chr5 180473518 180473532 RXRG JASPAR yes 70775336
chr5 180473521 180473527 TCF1 TRANSFAC yes 70775337
chr5 180473527 180473538 NFKB1 JASPAR yes 70775338
chr5 180473531 180473539 FEV JASPAR yes 70775339
chr5 180473539 180473547 FEV JASPAR yes 70775340
chr5 180473565 180473576 ESRRA JASPAR yes 70775341
chr5 180473612 180473618 MAZ TRANSFAC yes 70775342
SNP sites on vista50417[chr5:180473265-180473624]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180473277 rs182950487 C T
RREB1 ZNF263
8751418
chr5 180473377 rs547503839 G A
ZIC3
8751419
chr5 180473396 rs116304124 C T no 8751420
chr5 180473399 rs183876968 G A no 8751421
chr5 180473452 rs79836491 G A no 8751422
chr5 180473468 rs75574444 C A,T
INSM1
8751423
chr5 180473471 rs114937501 G T
INSM1
8751424
chr5 180473507 rs115512433 G T
CTCF
8751425
chr5 180473601 rs76407835 G A no 8751426
Genes possibly regulated by vista50417[chr5:180473265-180473624]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180415845 180433727 + BTNL3 ENSG00000168903.8 180415845 0.99 1.0 6084 42580
chr5 180467225 180488523 + BTNL9 ENSG00000165810.12 180467225 0.91 1.0 6085 93960
chr5 180551357 180552304 - OR2V1 ENSG00000185372.2 180552304 0.97 1.0 6086 21320
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50417[chr5:180473265-180473624]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results