EnhancerDB
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  3. vista5042[chr1:213151011-213151388]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5042[chr1:213151011-213151388]
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Tissue distribution of vista5042
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Transcription factor that possibly regulate vista5042[chr1:213151011-213151388]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 213151078 213151416 RUNX3 UCSC Txn Factor no Conserved 107869496
chr1 213151157 213151381 BATF UCSC Txn Factor no Conserved 107869511
chr1 213150991 213151012 ZNF263 JASPAR yes 35160114
chr1 213150991 213151012 ZNF263 JASPAR yes 118455864
chr1 213151012 213151024 NHLH1 JASPAR yes 35160115
chr1 213151012 213151024 NHLH1 JASPAR yes 118455865
chr1 213151013 213151023 NHLH1 JASPAR yes 35160116
chr1 213151013 213151023 NHLH1 JASPAR yes 118455866
chr1 213151026 213151032 GATA3 JASPAR yes 35160117
chr1 213151026 213151032 GATA3 JASPAR yes 118455867
chr1 213151030 213151036 GATA3 JASPAR yes 35160118
chr1 213151030 213151036 GATA3 JASPAR yes 118455868
chr1 213151067 213151078 GCM1 JASPAR yes 35160119
chr1 213151067 213151078 GCM1 JASPAR yes 118455869
chr1 213151075 213151085 FIGLA JASPAR yes 35160120
chr1 213151075 213151085 FIGLA JASPAR yes 118455870
chr1 213151077 213151082 USF2 TRANSFAC yes 35160121
chr1 213151077 213151082 USF2 TRANSFAC yes 118455871
chr1 213151117 213151128 STAT1 JASPAR yes 35160122
chr1 213151117 213151128 STAT1 JASPAR yes 118455872
chr1 213151124 213151145 MAFG JASPAR yes 35160123
chr1 213151124 213151145 MAFG JASPAR yes 118455873
chr1 213151129 213151147 MAFF JASPAR yes 35160124
chr1 213151129 213151147 MAFF JASPAR yes 118455874
chr1 213151130 213151141 NFE2L2 JASPAR yes 35160125
chr1 213151130 213151141 NFE2L2 JASPAR yes 118455875
chr1 213151130 213151145 MAFK JASPAR yes 35160126
chr1 213151130 213151145 MAFK JASPAR yes 118455876
chr1 213151173 213151191 MAFF JASPAR yes 35160127
chr1 213151173 213151191 MAFF JASPAR yes 118455877
chr1 213151175 213151190 MAFK JASPAR yes 35160128
chr1 213151175 213151190 MAFK JASPAR yes 118455878
chr1 213151192 213151196 H4TF2 TRANSFAC yes 35160129
chr1 213151192 213151196 H4TF2 TRANSFAC yes 118455879
chr1 213151198 213151210 GLI2 JASPAR yes 35160130
chr1 213151198 213151210 GLI2 JASPAR yes 118455880
chr1 213151203 213151218 NR2C2 JASPAR yes 35160131
chr1 213151203 213151218 NR2C2 JASPAR yes 118455881
chr1 213151227 213151242 TFAP2C JASPAR yes 35160132
chr1 213151227 213151242 TFAP2C JASPAR yes 118455882
chr1 213151230 213151241 TFAP2A JASPAR yes 35160133
chr1 213151230 213151241 TFAP2B JASPAR yes 35160134
chr1 213151230 213151241 TFAP2C JASPAR yes 35160135
chr1 213151230 213151241 TFAP2A JASPAR yes 118455883
chr1 213151230 213151241 TFAP2B JASPAR yes 118455884
chr1 213151230 213151241 TFAP2C JASPAR yes 118455885
chr1 213151241 213151251 FIGLA JASPAR yes 35160136
chr1 213151241 213151251 FIGLA JASPAR yes 118455886
chr1 213151242 213151251 SNAI2 JASPAR yes 35160137
chr1 213151242 213151251 SNAI2 JASPAR yes 118455887
chr1 213151243 213151248 USF2 TRANSFAC yes 35160138
chr1 213151243 213151248 USF2 TRANSFAC yes 118455888
chr1 213151254 213151265 FOS JASPAR yes 35160139
chr1 213151254 213151265 FOSL1 JASPAR yes 35160140
chr1 213151254 213151265 JUND JASPAR yes 35160141
chr1 213151254 213151265 FOS JASPAR yes 118455889
chr1 213151254 213151265 FOSL1 JASPAR yes 118455890
chr1 213151254 213151265 JUND JASPAR yes 118455891
chr1 213151256 213151262 JUN TRANSFAC yes 35160142
chr1 213151256 213151262 JUN TRANSFAC yes 118455892
chr1 213151283 213151296 NR2F1 JASPAR yes 35160143
chr1 213151283 213151296 NR2F1 JASPAR yes 118455893
chr1 213151285 213151296 ESRRA JASPAR yes 35160144
chr1 213151285 213151296 ESRRB JASPAR yes 35160145
chr1 213151285 213151296 ESRRA JASPAR yes 118455894
chr1 213151285 213151296 ESRRB JASPAR yes 118455895
chr1 213151287 213151297 RORA JASPAR yes 35160146
chr1 213151287 213151297 RORA JASPAR yes 118455896
chr1 213151300 213151303 MYB TRANSFAC yes 35160147
chr1 213151300 213151303 MYB TRANSFAC yes 118455897
chr1 213151338 213151342 LFA1 TRANSFAC yes 35160148
chr1 213151338 213151342 LFA1 TRANSFAC yes 118455898
chr1 213151342 213151350 GATA3 JASPAR yes 35160149
chr1 213151342 213151350 GATA3 JASPAR yes 118455899
chr1 213151350 213151370 RREB1 JASPAR yes 35160150
chr1 213151350 213151370 RREB1 JASPAR yes 118455900
chr1 213151354 213151364 TBX21 JASPAR yes 35160151
chr1 213151354 213151364 TBX21 JASPAR yes 118455901
chr1 213151354 213151365 TBX20 JASPAR yes 35160152
chr1 213151354 213151365 TBX20 JASPAR yes 118455902
chr1 213151354 213151367 EOMES JASPAR yes 35160153
chr1 213151354 213151367 EOMES JASPAR yes 118455903
chr1 213151355 213151363 MGA JASPAR yes 35160154
chr1 213151355 213151363 TBX15 JASPAR yes 35160155
chr1 213151355 213151363 TBX1 JASPAR yes 35160156
chr1 213151355 213151363 TBX4 JASPAR yes 35160157
chr1 213151355 213151363 TBX5 JASPAR yes 35160158
chr1 213151355 213151363 MGA JASPAR yes 118455904
chr1 213151355 213151363 TBX15 JASPAR yes 118455905
chr1 213151355 213151363 TBX1 JASPAR yes 118455906
chr1 213151355 213151363 TBX4 JASPAR yes 118455907
chr1 213151355 213151363 TBX5 JASPAR yes 118455908
chr1 213151374 213151390 SOX8 JASPAR yes 35160159
chr1 213151374 213151390 SOX8 JASPAR yes 118455909
SNP sites on vista5042[chr1:213151011-213151388]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 213151180 rs80337695 T G
BATF MAFF MAFK RUNX3
926826
chr1 213151197 rs141879528 C T
BATF RUNX3
926827
chr1 213151354 rs188013279 T C
BATF EOMES RREB1 RUNX3 TBX20 TBX21
926828
Genes possibly regulated by vista5042[chr1:213151011-213151388]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 213123862 213165379 + VASH2 ENSG00000143494.11 213123862 0.87 0.99 1835 72851
chr1 213165524 213189168 - ANGEL2 ENSG00000174606.8 213189168 0.63 0.99 1836 62220
chr1 213224589 213448116 + RPS6KC1 ENSG00000136643.7 213224589 0.66 0.99 1837 26799
Expression level of Genes
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miRNAs possibly regulated by vista5042[chr1:213151011-213151388]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results