EnhancerDB
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  3. vista50422[chr5:180611137-180611357]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50422[chr5:180611137-180611357]
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Tissue distribution of vista50422
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Transcription factor that possibly regulate vista50422[chr5:180611137-180611357]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180610804 180611601 E2F1 UCSC Txn Factor no Conserved 108537794
chr5 180610948 180611767 POLR2A UCSC Txn Factor no Conserved 108537795
chr5 180611058 180611553 MYC UCSC Txn Factor no Conserved 108537796
chr5 180611072 180611556 ATF3 UCSC Txn Factor no Conserved 108537797
chr5 180611090 180611650 CTCF UCSC Txn Factor no Conserved 108537798
chr5 180611092 180611535 MAX UCSC Txn Factor no Conserved 108537799
chr5 180611117 180611401 EGR1 UCSC Txn Factor no Conserved 108537800
chr5 180611123 180611453 BHLHE40 UCSC Txn Factor no Conserved 108537801
chr5 180611139 180611356 CTCFL UCSC Txn Factor no Conserved 108537802
chr5 180611140 180611446 USF2 UCSC Txn Factor no Conserved 108537803
chr5 180611146 180611419 TAF7 UCSC Txn Factor no Conserved 108537804
chr5 180611151 180611402 USF1 UCSC Txn Factor no Conserved 108537805
chr5 180611215 180611471 ATF1 UCSC Txn Factor no Conserved 108537806
chr5 180611182 180611191 SP1 TRANSFAC yes 68238999
chr5 180611182 180611191 SP1 TRANSFAC yes 70775403
chr5 180611183 180611188 SP1 TRANSFAC yes 68239000
chr5 180611183 180611188 SP1 TRANSFAC yes 70775404
chr5 180611217 180611228 NRF1 JASPAR yes 68239001
chr5 180611217 180611228 NRF1 JASPAR yes 70775405
chr5 180611219 180611227 WT1 TRANSFAC yes 68239002
chr5 180611219 180611227 WT1 TRANSFAC yes 70775406
chr5 180611222 180611228 SP1 TRANSFAC yes 68239003
chr5 180611222 180611228 SP1 TRANSFAC yes 70775407
chr5 180611259 180611278 CTCF JASPAR yes 68239004
chr5 180611259 180611278 CTCF JASPAR yes 70775408
chr5 180611273 180611277 ESR1 TRANSFAC yes 68239005
chr5 180611273 180611277 ESR1 TRANSFAC yes 70775409
chr5 180611273 180611283 MAX JASPAR yes 68239006
chr5 180611273 180611283 MAX JASPAR yes 70775410
chr5 180611273 180611284 USF1 JASPAR yes 68239007
chr5 180611273 180611284 USF2 JASPAR yes 68239008
chr5 180611273 180611284 USF1 JASPAR yes 70775411
chr5 180611273 180611284 USF2 JASPAR yes 70775412
chr5 180611274 180611284 BHLHE40 JASPAR yes 68239009
chr5 180611274 180611284 BHLHE41 JASPAR yes 68239010
chr5 180611274 180611284 HEY1 JASPAR yes 68239011
chr5 180611274 180611284 HEY2 JASPAR yes 68239012
chr5 180611274 180611284 MAX JASPAR yes 68239013
chr5 180611274 180611284 MLXIPL JASPAR yes 68239014
chr5 180611274 180611284 MNT JASPAR yes 68239015
chr5 180611274 180611284 SREBF2 JASPAR yes 68239016
chr5 180611274 180611284 TFE3 JASPAR yes 68239017
chr5 180611274 180611284 TFEB JASPAR yes 68239018
chr5 180611274 180611284 TFEC JASPAR yes 68239019
chr5 180611274 180611284 BHLHE40 JASPAR yes 70775413
chr5 180611274 180611284 BHLHE41 JASPAR yes 70775414
chr5 180611274 180611284 HEY1 JASPAR yes 70775415
chr5 180611274 180611284 HEY2 JASPAR yes 70775416
chr5 180611274 180611284 MAX JASPAR yes 70775417
chr5 180611274 180611284 MLXIPL JASPAR yes 70775418
chr5 180611274 180611284 MNT JASPAR yes 70775419
chr5 180611274 180611284 SREBF2 JASPAR yes 70775420
chr5 180611274 180611284 TFE3 JASPAR yes 70775421
chr5 180611274 180611284 TFEB JASPAR yes 70775422
chr5 180611274 180611284 TFEC JASPAR yes 70775423
chr5 180611275 180611285 MAX JASPAR yes 68239020
chr5 180611275 180611285 MAX JASPAR yes 70775424
chr5 180611276 180611281 MYC TRANSFAC yes 68239021
chr5 180611276 180611281 USF1 TRANSFAC yes 68239022
chr5 180611276 180611281 USF2 TRANSFAC yes 68239023
chr5 180611276 180611281 MYC TRANSFAC yes 70775425
chr5 180611276 180611281 USF1 TRANSFAC yes 70775426
chr5 180611276 180611281 USF2 TRANSFAC yes 70775427
chr5 180611314 180611320 ETS1 JASPAR yes 68239024
chr5 180611314 180611320 ETS1 JASPAR yes 70775428
SNP sites on vista50422[chr5:180611137-180611357]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180611165 rs7716844 T C
ATF3 BHLHE40 CTCF CTCFL E2F1 EGR1 MAX MYC POLR2A TAF7 USF1 USF2
8752345
chr5 180611186 rs146051680 GC G
ATF3 BHLHE40 CTCF CTCFL E2F1 EGR1 MAX MYC POLR2A SP1 TAF7 USF1 USF2
8752346
chr5 180611288 rs10038861 C T
ATF1 ATF3 BHLHE40 CTCF CTCFL E2F1 EGR1 MAX MYC POLR2A TAF7 USF1 USF2
8752347
chr5 180611340 rs7713229 A G
ATF1 ATF3 BHLHE40 CTCF CTCFL E2F1 EGR1 MAX MYC POLR2A TAF7 USF1 USF2
8752348
Genes possibly regulated by vista50422[chr5:180611137-180611357]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180551357 180552304 - OR2V1 ENSG00000185372.2 180552304 0.97 1.0 6086 41167
chr5 180581943 180582890 + OR2V2 ENSG00000182613.1 180581943 1.0 1.0 6087 70806
chr5 180620924 180632293 - TRIM7 ENSG00000146054.13 180632293 0.92 1.0 6088 79064
chr5 180649499 180662809 + TRIM41 ENSG00000146063.14 180649499 0.68 1.0 6089 61858
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0.76 1.0 6090 36261
chr5 180681417 180688119 - TRIM52 ENSG00000183718.4 180688119 0.69 0.99 6091 23238
chr5 180682720 180684578 + AC008443.1 ENSG00000268397.1 180682720 0.93 1.0 6092 28637
Expression level of Genes
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miRNAs possibly regulated by vista50422[chr5:180611137-180611357]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results