EnhancerDB
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  3. vista50425[chr5:180616521-180617006]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50425[chr5:180616521-180617006]
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Tissue distribution of vista50425
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Transcription factor that possibly regulate vista50425[chr5:180616521-180617006]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 180616527 180616537 SP1 JASPAR yes 68239793
chr5 180616527 180616537 SP1 JASPAR yes 70775453
chr5 180616541 180616552 NRF1 JASPAR yes 68239794
chr5 180616541 180616552 NRF1 JASPAR yes 70775454
chr5 180616542 180616553 NRF1 JASPAR yes 68239795
chr5 180616542 180616553 NRF1 JASPAR yes 70775455
chr5 180616544 180616555 NRF1 JASPAR yes 68239796
chr5 180616544 180616555 NRF1 JASPAR yes 70775456
chr5 180616550 180616561 E2F4 JASPAR yes 68239797
chr5 180616550 180616561 E2F4 JASPAR yes 70775457
chr5 180616572 180616576 H4TF2 TRANSFAC yes 68239798
chr5 180616572 180616576 H4TF2 TRANSFAC yes 70775458
chr5 180616572 180616589 PAX9 JASPAR yes 68239799
chr5 180616572 180616589 PAX9 JASPAR yes 70775459
chr5 180616573 180616592 PAX5 JASPAR yes 68239800
chr5 180616573 180616592 PAX5 JASPAR yes 70775460
chr5 180616576 180616589 SMAD2 JASPAR yes 68239801
chr5 180616576 180616589 SMAD2 JASPAR yes 70775461
chr5 180616597 180616611 EBF1 JASPAR yes 68239802
chr5 180616597 180616611 EBF1 JASPAR yes 70775462
chr5 180616604 180616617 NFKB2 JASPAR yes 68239803
chr5 180616604 180616617 NFKB2 JASPAR yes 70775463
chr5 180616607 180616622 TFAP2A JASPAR yes 68239804
chr5 180616607 180616622 TFAP2A JASPAR yes 70775464
chr5 180616608 180616623 TFAP2C JASPAR yes 68239805
chr5 180616608 180616623 TFAP2C JASPAR yes 70775465
chr5 180616610 180616622 TFAP2A JASPAR yes 68239806
chr5 180616610 180616622 TFAP2B JASPAR yes 68239807
chr5 180616610 180616622 TFAP2C JASPAR yes 68239808
chr5 180616610 180616622 TFAP2A JASPAR yes 70775466
chr5 180616610 180616622 TFAP2B JASPAR yes 70775467
chr5 180616610 180616622 TFAP2C JASPAR yes 70775468
chr5 180616610 180616625 TFAP2A JASPAR yes 68239809
chr5 180616610 180616625 TFAP2A JASPAR yes 70775469
chr5 180616611 180616620 TFAP2A JASPAR yes 68239810
chr5 180616611 180616620 TFAP2A JASPAR yes 70775470
chr5 180616612 180616621 TFAP2A JASPAR yes 68239811
chr5 180616612 180616621 TFAP2A JASPAR yes 70775471
chr5 180616621 180616632 TFAP2A JASPAR yes 68239812
chr5 180616621 180616632 TFAP2A JASPAR yes 70775472
chr5 180616634 180616638 LFA1 TRANSFAC yes 68239813
chr5 180616634 180616638 LFA1 TRANSFAC yes 70775473
chr5 180616638 180616653 TFAP2A JASPAR yes 68239814
chr5 180616638 180616653 TFAP2C JASPAR yes 68239815
chr5 180616638 180616653 TFAP2A JASPAR yes 70775474
chr5 180616638 180616653 TFAP2C JASPAR yes 70775475
chr5 180616639 180616650 TFAP2A JASPAR yes 68239816
chr5 180616639 180616650 TFAP2B JASPAR yes 68239817
chr5 180616639 180616650 TFAP2C JASPAR yes 68239818
chr5 180616639 180616650 TFAP2A JASPAR yes 70775476
chr5 180616639 180616650 TFAP2B JASPAR yes 70775477
chr5 180616639 180616650 TFAP2C JASPAR yes 70775478
chr5 180616655 180616666 NRF1 JASPAR yes 68239819
chr5 180616655 180616666 NRF1 JASPAR yes 70775479
chr5 180616656 180616661 SP1 TRANSFAC yes 68239820
chr5 180616656 180616661 SP1 TRANSFAC yes 70775480
chr5 180616657 180616662 SP1 TRANSFAC yes 68239821
chr5 180616657 180616662 SP1 TRANSFAC yes 70775481
chr5 180616665 180616686 ZNF263 JASPAR yes 68239822
chr5 180616665 180616686 ZNF263 JASPAR yes 70775482
chr5 180616707 180616718 HOXA10 JASPAR yes 68239823
chr5 180616707 180616718 HOXA10 JASPAR yes 70775483
chr5 180616708 180616718 ALX3 JASPAR yes 68239824
chr5 180616708 180616718 GSX2 JASPAR yes 68239825
chr5 180616708 180616718 MNX1 JASPAR yes 68239826
chr5 180616708 180616718 ALX3 JASPAR yes 70775484
chr5 180616708 180616718 GSX2 JASPAR yes 70775485
chr5 180616708 180616718 MNX1 JASPAR yes 70775486
chr5 180616709 180616717 BARX1 JASPAR yes 68239827
chr5 180616709 180616717 BSX JASPAR yes 68239828
chr5 180616709 180616717 ISL2 JASPAR yes 68239829
chr5 180616709 180616717 LMX1B JASPAR yes 68239830
chr5 180616709 180616717 MSX1 JASPAR yes 68239831
chr5 180616709 180616717 MSX2 JASPAR yes 68239832
chr5 180616709 180616717 BARX1 JASPAR yes 70775487
chr5 180616709 180616717 BSX JASPAR yes 70775488
chr5 180616709 180616717 ISL2 JASPAR yes 70775489
chr5 180616709 180616717 LMX1B JASPAR yes 70775490
chr5 180616709 180616717 MSX1 JASPAR yes 70775491
chr5 180616709 180616717 MSX2 JASPAR yes 70775492
chr5 180616724 180616728 YY1 TRANSFAC yes 68239833
chr5 180616724 180616728 YY1 TRANSFAC yes 70775493
chr5 180616729 180616740 HOXA10 JASPAR yes 68239834
chr5 180616729 180616740 HOXC12 JASPAR yes 68239835
chr5 180616729 180616740 HOXA10 JASPAR yes 70775494
chr5 180616729 180616740 HOXC12 JASPAR yes 70775495
chr5 180616730 180616740 HOXC10 JASPAR yes 68239836
chr5 180616730 180616740 HOXD11 JASPAR yes 68239837
chr5 180616730 180616740 HOXC10 JASPAR yes 70775496
chr5 180616730 180616740 HOXD11 JASPAR yes 70775497
chr5 180616730 180616745 MEF2C JASPAR yes 68239838
chr5 180616730 180616745 MEF2C JASPAR yes 70775498
chr5 180616732 180616744 MEF2A JASPAR yes 68239839
chr5 180616732 180616744 MEF2A JASPAR yes 70775499
chr5 180616743 180616754 DUX4 JASPAR yes 68239840
chr5 180616743 180616754 DUX4 JASPAR yes 70775500
chr5 180616744 180616754 RUNX3 JASPAR yes 68239841
chr5 180616744 180616754 RUNX3 JASPAR yes 70775501
chr5 180616745 180616754 RUNX2 JASPAR yes 68239842
chr5 180616745 180616754 RUNX2 JASPAR yes 70775502
chr5 180616748 180616759 FLI1 JASPAR yes 68239843
chr5 180616748 180616759 FLI1 JASPAR yes 70775503
chr5 180616797 180616812 MEF2A JASPAR yes 68239844
chr5 180616797 180616812 MEF2A JASPAR yes 70775504
chr5 180616798 180616813 MEF2C JASPAR yes 68239845
chr5 180616798 180616813 MEF2C JASPAR yes 70775505
chr5 180616801 180616805 YY1 TRANSFAC yes 68239846
chr5 180616801 180616805 YY1 TRANSFAC yes 70775506
chr5 180616824 180616828 YY1 TRANSFAC yes 68239847
chr5 180616824 180616828 YY1 TRANSFAC yes 70775507
chr5 180616825 180616833 FEV JASPAR yes 68239848
chr5 180616825 180616833 FEV JASPAR yes 70775508
chr5 180616849 180616865 ZNF143 JASPAR yes 68239849
chr5 180616849 180616865 ZNF143 JASPAR yes 70775509
chr5 180616876 180616885 SRY JASPAR yes 68239850
chr5 180616876 180616885 SRY JASPAR yes 70775510
chr5 180616878 180616887 SOX9 JASPAR yes 68239851
chr5 180616878 180616887 SOX9 JASPAR yes 70775511
chr5 180616879 180616895 SOX8 JASPAR yes 68239852
chr5 180616879 180616895 SOX8 JASPAR yes 70775512
chr5 180616888 180616892 YY1 TRANSFAC yes 68239853
chr5 180616888 180616892 YY1 TRANSFAC yes 70775513
chr5 180616890 180616900 NFATC3 JASPAR yes 68239854
chr5 180616890 180616900 NFATC3 JASPAR yes 70775514
chr5 180616891 180616898 NFATC2 JASPAR yes 68239855
chr5 180616891 180616898 NFATC2 JASPAR yes 70775515
chr5 180616940 180616944 NFE TRANSFAC yes 68239856
chr5 180616940 180616944 NFE TRANSFAC yes 70775516
chr5 180616946 180616967 ZNF263 JASPAR yes 68239857
chr5 180616946 180616967 ZNF263 JASPAR yes 70775517
chr5 180616949 180616955 SP1 TRANSFAC yes 68239858
chr5 180616949 180616955 SP1 TRANSFAC yes 70775518
chr5 180616949 180616959 SP1 JASPAR yes 68239859
chr5 180616949 180616959 SP1 JASPAR yes 70775519
chr5 180616949 180616970 ZNF263 JASPAR yes 68239860
chr5 180616949 180616970 ZNF263 JASPAR yes 70775520
chr5 180616976 180616990 EBF1 JASPAR yes 68239861
chr5 180616976 180616990 EBF1 JASPAR yes 70775521
chr5 180616977 180616988 EBF1 JASPAR yes 68239862
chr5 180616977 180616988 EBF1 JASPAR yes 70775522
SNP sites on vista50425[chr5:180616521-180617006]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 180616598 rs11960353 A G
EBF1
8752472
chr5 180616821 rs148818135 G C no 8752473
chr5 180616960 rs143621037 C T
ZNF263
8752474
Genes possibly regulated by vista50425[chr5:180616521-180617006]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 180551357 180552304 - OR2V1 ENSG00000185372.2 180552304 0.97 1.0 6086 35783
chr5 180581943 180582890 + OR2V2 ENSG00000182613.1 180581943 1.0 1.0 6087 65422
chr5 180620924 180632293 - TRIM7 ENSG00000146054.13 180632293 0.92 1.0 6088 84713
chr5 180649499 180662809 + TRIM41 ENSG00000146063.14 180649499 0.68 1.0 6089 67507
chr5 180663909 180675096 - GNB2L1 ENSG00000204628.7 180675096 0.76 1.0 6090 41910
chr5 180681417 180688119 - TRIM52 ENSG00000183718.4 180688119 0.69 0.99 6091 28887
chr5 180682720 180684578 + AC008443.1 ENSG00000268397.1 180682720 0.93 1.0 6092 34286
Expression level of Genes
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miRNAs possibly regulated by vista50425[chr5:180616521-180617006]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results