EnhancerDB
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  3. vista5043[chr1:213152730-213153023]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5043[chr1:213152730-213153023]
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Tissue distribution of vista5043
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Transcription factor that possibly regulate vista5043[chr1:213152730-213153023]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 213152938 213153280 RUNX3 UCSC Txn Factor no Conserved 107869539
chr1 213152953 213153407 EBF1 UCSC Txn Factor no Conserved 107869541
chr1 213152988 213153232 EGR1 UCSC Txn Factor no Conserved 107869548
chr1 213152716 213152734 MAFF JASPAR yes 35160353
chr1 213152716 213152734 MAFF JASPAR yes 118455910
chr1 213152717 213152732 MAFK JASPAR yes 35160354
chr1 213152717 213152732 MAFK JASPAR yes 118455911
chr1 213152721 213152732 NRL JASPAR yes 35160356
chr1 213152721 213152732 NRL JASPAR yes 118455912
chr1 213152725 213152736 NFIL3 JASPAR yes 35160357
chr1 213152725 213152736 NFIL3 JASPAR yes 118455913
chr1 213152726 213152730 YY1 TRANSFAC yes 35160358
chr1 213152726 213152730 YY1 TRANSFAC yes 118455914
chr1 213152726 213152738 DBP JASPAR yes 35160359
chr1 213152726 213152738 HLF JASPAR yes 35160360
chr1 213152726 213152738 TEF JASPAR yes 35160361
chr1 213152726 213152738 DBP JASPAR yes 118455915
chr1 213152726 213152738 HLF JASPAR yes 118455916
chr1 213152726 213152738 TEF JASPAR yes 118455917
chr1 213152728 213152739 NFIL3 JASPAR yes 35160362
chr1 213152728 213152739 NFIL3 JASPAR yes 118455918
chr1 213152737 213152743 YY1 JASPAR yes 35160363
chr1 213152737 213152743 YY1 JASPAR yes 118455919
chr1 213152747 213152751 YY1 TRANSFAC yes 35160364
chr1 213152747 213152751 YY1 TRANSFAC yes 118455920
chr1 213152780 213152790 SP1 JASPAR yes 35160365
chr1 213152780 213152790 SP1 JASPAR yes 118455921
chr1 213152782 213152788 MAZ TRANSFAC yes 35160366
chr1 213152782 213152788 MAZ TRANSFAC yes 118455922
chr1 213152786 213152791 SP1 TRANSFAC yes 35160367
chr1 213152786 213152791 SP1 TRANSFAC yes 118455923
chr1 213152786 213152800 PLAG1 JASPAR yes 35160368
chr1 213152786 213152800 PLAG1 JASPAR yes 118455924
chr1 213152787 213152801 PLAG1 JASPAR yes 35160369
chr1 213152787 213152801 PLAG1 JASPAR yes 118455925
chr1 213152797 213152807 NFATC3 JASPAR yes 35160370
chr1 213152797 213152807 NFATC3 JASPAR yes 118455926
chr1 213152799 213152806 NFATC2 JASPAR yes 35160371
chr1 213152799 213152806 NFATC2 JASPAR yes 118455927
chr1 213152802 213152816 POU1F1 JASPAR yes 35160372
chr1 213152802 213152816 POU1F1 JASPAR yes 118455928
chr1 213152803 213152815 POU3F1 JASPAR yes 35160373
chr1 213152803 213152815 POU3F2 JASPAR yes 35160374
chr1 213152803 213152815 POU3F1 JASPAR yes 118455929
chr1 213152803 213152815 POU3F2 JASPAR yes 118455930
chr1 213152803 213152816 POU3F3 JASPAR yes 35160375
chr1 213152803 213152816 POU3F3 JASPAR yes 118455931
chr1 213152804 213152816 POU2F1 JASPAR yes 35160376
chr1 213152804 213152816 POU2F1 JASPAR yes 118455932
chr1 213152804 213152822 SRF JASPAR yes 35160377
chr1 213152804 213152822 SRF JASPAR yes 118455933
chr1 213152805 213152814 POU3F4 JASPAR yes 35160378
chr1 213152805 213152814 POU5F1B JASPAR yes 35160379
chr1 213152805 213152814 POU3F4 JASPAR yes 118455934
chr1 213152805 213152814 POU5F1B JASPAR yes 118455935
chr1 213152812 213152815 MYB TRANSFAC yes 35160380
chr1 213152812 213152815 MYB TRANSFAC yes 118455936
chr1 213152828 213152840 NHLH1 JASPAR yes 35160381
chr1 213152828 213152840 NHLH1 JASPAR yes 118455937
chr1 213152829 213152839 NHLH1 JASPAR yes 35160382
chr1 213152829 213152839 TFAP4 JASPAR yes 35160383
chr1 213152829 213152839 NHLH1 JASPAR yes 118455938
chr1 213152829 213152839 TFAP4 JASPAR yes 118455939
chr1 213152840 213152844 H4TF2 TRANSFAC yes 35160384
chr1 213152840 213152844 H4TF2 TRANSFAC yes 118455940
chr1 213152851 213152855 NFE TRANSFAC yes 35160385
chr1 213152851 213152855 NFE TRANSFAC yes 118455941
chr1 213152862 213152867 GATA2 JASPAR yes 35160386
chr1 213152862 213152867 GATA2 JASPAR yes 118455942
chr1 213152863 213152875 MEF2A JASPAR yes 35160387
chr1 213152863 213152875 MEF2B JASPAR yes 35160388
chr1 213152863 213152875 MEF2A JASPAR yes 118455943
chr1 213152863 213152875 MEF2B JASPAR yes 118455944
chr1 213152877 213152881 YY1 TRANSFAC yes 35160389
chr1 213152877 213152881 YY1 TRANSFAC yes 118455945
chr1 213152878 213152899 ZNF263 JASPAR yes 35160390
chr1 213152878 213152899 ZNF263 JASPAR yes 118455946
chr1 213152881 213152902 ZNF263 JASPAR yes 35160391
chr1 213152881 213152902 ZNF263 JASPAR yes 118455947
chr1 213152882 213152887 GATA2 JASPAR yes 35160392
chr1 213152882 213152887 GATA2 JASPAR yes 118455948
chr1 213152884 213152890 MZF1 JASPAR yes 35160393
chr1 213152884 213152890 MZF1 JASPAR yes 118455949
chr1 213152884 213152905 ZNF263 JASPAR yes 35160394
chr1 213152884 213152905 ZNF263 JASPAR yes 118455950
chr1 213152889 213152895 ZNF354C JASPAR yes 35160395
chr1 213152889 213152895 ZNF354C JASPAR yes 118455951
chr1 213152896 213152907 E2F6 JASPAR yes 35160396
chr1 213152896 213152907 E2F6 JASPAR yes 118455952
chr1 213152931 213152938 SPIB JASPAR yes 35160397
chr1 213152931 213152938 SPIB JASPAR yes 118455953
chr1 213152939 213152943 YY1 TRANSFAC yes 35160398
chr1 213152939 213152943 YY1 TRANSFAC yes 118455954
chr1 213152957 213152966 PITX3 JASPAR yes 35160399
chr1 213152957 213152966 PITX3 JASPAR yes 118455955
chr1 213152957 213152967 GSC JASPAR yes 35160400
chr1 213152957 213152967 GSC JASPAR yes 118455956
chr1 213152958 213152966 RHOXF1 JASPAR yes 35160401
chr1 213152958 213152966 RHOXF1 JASPAR yes 118455957
chr1 213152976 213152994 ESR1 JASPAR yes 35160402
chr1 213152976 213152994 ESR1 JASPAR yes 118455958
chr1 213153009 213153019 MZF1 JASPAR yes 35160403
chr1 213153009 213153019 MZF1 JASPAR yes 118455959
chr1 213153012 213153022 SP1 JASPAR yes 35160404
chr1 213153012 213153022 SP1 JASPAR yes 118455960
chr1 213153014 213153020 MAZ TRANSFAC yes 35160405
chr1 213153014 213153020 MAZ TRANSFAC yes 118455961
chr1 213153018 213153022 LFA1 TRANSFAC yes 35160406
chr1 213153018 213153022 LFA1 TRANSFAC yes 118455962
chr1 213153021 213153030 ZEB1 JASPAR yes 35160407
chr1 213153021 213153030 ZEB1 JASPAR yes 118455963
SNP sites on vista5043[chr1:213152730-213153023]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 213152821 rs186819463 G A
SRF
926844
chr1 213152902 rs190836648 C T
E2F6 ZNF263
926845
chr1 213152933 rs114679151 T C
SPIB
926846
chr1 213153000 rs115274499 A G
EBF1 EGR1 RUNX3
926847
Genes possibly regulated by vista5043[chr1:213152730-213153023]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 213123862 213165379 + VASH2 ENSG00000143494.11 213123862 0.87 0.99 1835 71132
chr1 213165524 213189168 - ANGEL2 ENSG00000174606.8 213189168 0.63 0.99 1836 63855
chr1 213224589 213448116 + RPS6KC1 ENSG00000136643.7 213224589 0.66 0.99 1837 28434
Expression level of Genes
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miRNAs possibly regulated by vista5043[chr1:213152730-213153023]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results