EnhancerDB
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  3. vista50778[chr6:10719904-10720278]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50778[chr6:10719904-10720278]
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Tissue distribution of vista50778
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Transcription factor that possibly regulate vista50778[chr6:10719904-10720278]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 10719820 10720351 NFYB UCSC Txn Factor no Conserved 108538317
chr6 10720006 10720304 MAFK UCSC Txn Factor no Conserved 108538318
chr6 10720020 10720300 MAFF UCSC Txn Factor no Conserved 108538319
chr6 10720194 10722593 POLR2A UCSC Txn Factor no Conserved 108538320
chr6 10719912 10719927 ZIC4 JASPAR yes 70306710
chr6 10719925 10719940 STAT2 JASPAR yes 70306711
chr6 10719933 10719951 SRF JASPAR yes 70306712
chr6 10719935 10719951 SRF JASPAR yes 70306713
chr6 10719935 10719953 SRF JASPAR yes 70306714
chr6 10719944 10719959 RUNX2 JASPAR yes 70306715
chr6 10719951 10719961 GCM2 JASPAR yes 70306716
chr6 10719958 10719976 NFYA JASPAR yes 70306717
chr6 10719959 10719969 TFAP4 JASPAR yes 70306718
chr6 10719961 10719977 NFYA JASPAR yes 70306719
chr6 10719964 10719979 NFYB JASPAR yes 70306720
chr6 10719966 10719971 NFY TRANSFAC yes 70306721
chr6 10719970 10719974 H4TF2 TRANSFAC yes 70306722
chr6 10719974 10719978 YY1 TRANSFAC yes 70306723
chr6 10719982 10720000 NFYA JASPAR yes 70306724
chr6 10719985 10720001 NFYA JASPAR yes 70306725
chr6 10719988 10720003 NFYB JASPAR yes 70306726
chr6 10719990 10719995 NFY TRANSFAC yes 70306727
chr6 10719998 10720002 YY1 TRANSFAC yes 70306728
chr6 10720023 10720038 MAFK JASPAR yes 70306729
chr6 10720023 10720041 NFYA JASPAR yes 70306730
chr6 10720026 10720042 NFYA JASPAR yes 70306731
chr6 10720029 10720044 NFYB JASPAR yes 70306732
chr6 10720031 10720036 NFY TRANSFAC yes 70306733
chr6 10720101 10720119 NFYA JASPAR yes 70306734
chr6 10720104 10720120 NFYA JASPAR yes 70306735
chr6 10720107 10720122 NFYB JASPAR yes 70306736
chr6 10720109 10720114 NFY TRANSFAC yes 70306737
chr6 10720141 10720159 MAFF JASPAR yes 70306738
chr6 10720143 10720154 NRL JASPAR yes 70306739
chr6 10720143 10720158 MAFK JASPAR yes 70306740
chr6 10720143 10720161 NFYA JASPAR yes 70306741
chr6 10720149 10720164 NFYB JASPAR yes 70306742
chr6 10720159 10720163 YY1 TRANSFAC yes 70306743
chr6 10720189 10720196 NFATC2 JASPAR yes 70306744
chr6 10720198 10720204 MZF1 JASPAR yes 70306745
chr6 10720215 10720228 TFAP2A JASPAR yes 70306746
chr6 10720215 10720228 TFAP2B JASPAR yes 70306747
chr6 10720215 10720228 TFAP2C JASPAR yes 70306748
chr6 10720248 10720253 SP1 TRANSFAC yes 70306749
chr6 10720257 10720267 NFIA JASPAR yes 70306750
chr6 10720258 10720267 NFIX JASPAR yes 70306751
chr6 10720259 10720265 NFIC JASPAR yes 70306752
chr6 10720259 10720273 TLX1 JASPAR yes 70306753
chr6 10720260 10720274 TLX1 JASPAR yes 70306754
chr6 10720273 10720277 LFA1 TRANSFAC yes 70306755
SNP sites on vista50778[chr6:10719904-10720278]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 10719915 rs202159579 G A
NFYB ZIC4
8826149
chr6 10719919 rs373030118 T TG
NFYB ZIC4
8826150
chr6 10719919 rs527369714 T TG,TGG
NFYB ZIC4
8826151
chr6 10719919 rs76660792 T C,G
NFYB ZIC4
8826152
chr6 10720034 rs111833446 T C
MAFF MAFK NFY NFYA NFYB
8826153
chr6 10720081 rs9461079 C T
MAFF MAFK NFYB
8826154
chr6 10720088 rs9461080 G A
MAFF MAFK NFYB
8826155
chr6 10720105 rs111575817 G A,T
MAFF MAFK NFYA NFYB
8826156
chr6 10720106 rs2003056 C T
MAFF MAFK NFYA NFYB
8826157
chr6 10720119 rs111536697 G A
MAFF MAFK NFYA NFYB
8826158
chr6 10720120 rs146659482 T C
MAFF MAFK NFYA NFYB
8826159
chr6 10720147 rs113713584 C G
MAFF MAFK NFYA NFYB NRL
8826160
chr6 10720170 rs150321545 C T
MAFF MAFK NFYB
8826161
chr6 10720207 rs532626281 C G
MAFF MAFK NFYB POLR2A
8826162
chr6 10720209 rs372936130 T C
MAFF MAFK NFYB POLR2A
8826163
chr6 10720212 rs113233028 C T
MAFF MAFK NFYB POLR2A
8826164
chr6 10720220 rs144926460 C G,T
MAFF MAFK NFYB POLR2A TFAP2A TFAP2B TFAP2C
8826165
chr6 10720223 rs2005481 C A,T
MAFF MAFK NFYB POLR2A TFAP2A TFAP2B TFAP2C
8826166
chr6 10720233 rs149060240 C T
MAFF MAFK NFYB POLR2A
8826167
chr6 10720249 rs145919172 G C
MAFF MAFK NFYB POLR2A SP1
8826168
Genes possibly regulated by vista50778[chr6:10719904-10720278]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 10633993 10647501 + GCNT6 ENSG00000205318.3 10633993 0.92 0.93 6147 14089
chr6 10671651 10695030 - C6orf52 ENSG00000137434.7 10695030 0.89 0.99 6148 75126
chr6 10694928 10710015 + PAK1IP1 ENSG00000111845.4 10694928 0.79 0.98 6149 75024
chr6 10723148 10731362 + TMEM14C ENSG00000111843.9 10723148 0.57 0.99 6150 97130
chr6 10747992 10852986 + TMEM14B ENSG00000137210.9 10747992 0.86 0.97 6151 72286
chr6 10748027 10930656 + RP11-637O19.3 ENSG00000272162.1 10748027 0.92 1.0 6153 72251
chr6 10748027 10979553 + SYCP2L ENSG00000153157.8 10748027 0.82 0.98 6152 72251
Expression level of Genes
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miRNAs possibly regulated by vista50778[chr6:10719904-10720278]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results