EnhancerDB
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  3. vista50788[chr6:11197003-11197299]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50788[chr6:11197003-11197299]
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Tissue distribution of vista50788
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Transcription factor that possibly regulate vista50788[chr6:11197003-11197299]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11197053 11197343 MAFK UCSC Txn Factor no Conserved 108538345
chr6 11197007 11197018 SPDEF JASPAR yes 70307171
chr6 11197007 11197018 SPDEF JASPAR yes 99862884
chr6 11197013 11197031 NR3C1 JASPAR yes 70307172
chr6 11197013 11197031 NR3C1 JASPAR yes 99862885
chr6 11197019 11197030 GCM1 JASPAR yes 70307173
chr6 11197019 11197030 GCM1 JASPAR yes 99862886
chr6 11197025 11197029 H4TF2 TRANSFAC yes 70307174
chr6 11197025 11197029 H4TF2 TRANSFAC yes 99862887
chr6 11197030 11197034 YY1 TRANSFAC yes 70307175
chr6 11197030 11197034 YY1 TRANSFAC yes 99862888
chr6 11197035 11197050 HNF4A JASPAR yes 70307176
chr6 11197035 11197050 HNF4A JASPAR yes 99862889
chr6 11197036 11197046 NFIA JASPAR yes 70307177
chr6 11197036 11197046 NFIA JASPAR yes 99862890
chr6 11197038 11197044 NFIC JASPAR yes 70307178
chr6 11197038 11197044 NFIC JASPAR yes 99862891
chr6 11197067 11197072 ATF1 TRANSFAC yes 70307179
chr6 11197067 11197072 ATF1 TRANSFAC yes 99862892
chr6 11197121 11197136 SCRT1 JASPAR yes 70307180
chr6 11197121 11197136 SCRT1 JASPAR yes 99862893
chr6 11197123 11197136 SCRT2 JASPAR yes 70307181
chr6 11197123 11197136 SCRT2 JASPAR yes 99862894
chr6 11197124 11197143 RFX2 JASPAR yes 70307182
chr6 11197124 11197143 RFX2 JASPAR yes 99862895
chr6 11197125 11197131 PTF TRANSFAC yes 70307183
chr6 11197125 11197131 PTF TRANSFAC yes 99862896
chr6 11197135 11197141 ESR1 TRANSFAC yes 70307184
chr6 11197135 11197141 ESR1 TRANSFAC yes 99862897
chr6 11197137 11197141 ESR1 TRANSFAC yes 70307185
chr6 11197137 11197141 ESR1 TRANSFAC yes 99862898
chr6 11197148 11197154 NFIC JASPAR yes 70307186
chr6 11197148 11197154 NFIC JASPAR yes 99862899
chr6 11197150 11197154 H1TF2 TRANSFAC yes 70307187
chr6 11197150 11197154 NFE TRANSFAC yes 70307188
chr6 11197150 11197154 SRF TRANSFAC yes 70307189
chr6 11197150 11197154 H1TF2 TRANSFAC yes 99862900
chr6 11197150 11197154 NFE TRANSFAC yes 99862901
chr6 11197150 11197154 SRF TRANSFAC yes 99862902
chr6 11197171 11197177 PEA3 TRANSFAC yes 70307190
chr6 11197171 11197177 PEA3 TRANSFAC yes 99862903
chr6 11197175 11197193 MAFF JASPAR yes 70307191
chr6 11197175 11197193 MAFF JASPAR yes 99862904
chr6 11197177 11197188 NRL JASPAR yes 70307192
chr6 11197177 11197188 NRL JASPAR yes 99862905
chr6 11197177 11197192 MAFK JASPAR yes 70307193
chr6 11197177 11197192 MAFK JASPAR yes 99862906
chr6 11197177 11197198 MAFG JASPAR yes 70307194
chr6 11197177 11197198 MAFG JASPAR yes 99862907
chr6 11197201 11197207 SOX10 JASPAR yes 70307195
chr6 11197201 11197207 SOX10 JASPAR yes 99862908
chr6 11197214 11197225 RUNX1 JASPAR yes 70307196
chr6 11197214 11197225 RUNX1 JASPAR yes 99862909
chr6 11197224 11197228 YY1 TRANSFAC yes 70307197
chr6 11197224 11197228 YY1 TRANSFAC yes 99862910
chr6 11197251 11197266 FOXA1 JASPAR yes 70307198
chr6 11197251 11197266 FOXA1 JASPAR yes 99862911
chr6 11197252 11197259 NKX3-1 JASPAR yes 70307199
chr6 11197252 11197259 NKX3-1 JASPAR yes 99862912
chr6 11197252 11197264 FOXC2 JASPAR yes 70307200
chr6 11197252 11197264 FOXC2 JASPAR yes 99862913
chr6 11197276 11197297 ZNF263 JASPAR yes 70307201
chr6 11197276 11197297 ZNF263 JASPAR yes 99862914
SNP sites on vista50788[chr6:11197003-11197299]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11197060 rs115085208 C T
MAFK
8828370
chr6 11197090 rs371487775 C T
MAFK
8828371
chr6 11197232 rs113200998 G C
MAFK
8828372
Genes possibly regulated by vista50788[chr6:11197003-11197299]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11102722 11111965 - ERVFRD-1 ENSG00000244476.2 11111965 0.98 1.0 6158 14962
Expression level of Genes
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miRNAs possibly regulated by vista50788[chr6:11197003-11197299]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results