EnhancerDB
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  3. vista50800[chr6:11277838-11278167]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50800[chr6:11277838-11278167]
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Tissue distribution of vista50800
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Transcription factor that possibly regulate vista50800[chr6:11277838-11278167]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538354
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538355
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538356
chr6 11277721 11278159 EBF1 UCSC Txn Factor no Conserved 108538357
chr6 11277721 11278159 EBF1 UCSC Txn Factor no Conserved 108538358
chr6 11277818 11278253 RELA UCSC Txn Factor no Conserved 108538359
chr6 11277824 11278153 RUNX3 UCSC Txn Factor no Conserved 108538360
chr6 11277900 11278155 BATF UCSC Txn Factor no Conserved 108538361
chr6 11277826 11277844 ESR2 JASPAR yes 70307844
chr6 11277826 11277844 ESR2 JASPAR yes 99871932
chr6 11277828 11277843 ESR2 JASPAR yes 70307845
chr6 11277828 11277843 ESR2 JASPAR yes 99871933
chr6 11277828 11277848 ESR1 JASPAR yes 70307846
chr6 11277828 11277848 ESR1 JASPAR yes 99871934
chr6 11277836 11277845 THAP1 JASPAR yes 70307847
chr6 11277836 11277845 THAP1 JASPAR yes 99871935
chr6 11277837 11277849 TFAP2A JASPAR yes 70307848
chr6 11277837 11277849 TFAP2A JASPAR yes 99871936
chr6 11277837 11277852 NR2C2 JASPAR yes 70307849
chr6 11277837 11277852 NR2C2 JASPAR yes 99871937
chr6 11277877 11277883 TBP TRANSFAC yes 70307850
chr6 11277877 11277883 TBP TRANSFAC yes 99871938
chr6 11277884 11277899 HNF4A JASPAR yes 70307851
chr6 11277884 11277899 HNF4A JASPAR yes 99871939
chr6 11277892 11277901 THAP1 JASPAR yes 70307852
chr6 11277892 11277901 THAP1 JASPAR yes 99871940
chr6 11277913 11277933 TBX19 JASPAR yes 70307853
chr6 11277913 11277933 TBX19 JASPAR yes 99871941
chr6 11277915 11277931 T JASPAR yes 70307854
chr6 11277915 11277931 T JASPAR yes 99871942
chr6 11277950 11277954 YY1 TRANSFAC yes 70307855
chr6 11277950 11277954 YY1 TRANSFAC yes 99871943
chr6 11277959 11277979 TP63 JASPAR yes 70307856
chr6 11277959 11277979 TP63 JASPAR yes 99871944
chr6 11277960 11277978 TP63 JASPAR yes 70307857
chr6 11277960 11277978 TP73 JASPAR yes 70307858
chr6 11277960 11277978 TP63 JASPAR yes 99871945
chr6 11277960 11277978 TP73 JASPAR yes 99871946
chr6 11277962 11277977 TP53 JASPAR yes 70307859
chr6 11277962 11277977 TP53 JASPAR yes 99871947
chr6 11277978 11277982 LFA1 TRANSFAC yes 70307860
chr6 11277978 11277982 LFA1 TRANSFAC yes 99871948
chr6 11278002 11278012 ETV5 JASPAR yes 70307861
chr6 11278002 11278012 ETV5 JASPAR yes 99871949
chr6 11278033 11278037 LFA1 TRANSFAC yes 70307862
chr6 11278033 11278037 LFA1 TRANSFAC yes 99871950
chr6 11278041 11278051 NFKB1 JASPAR yes 70307863
chr6 11278041 11278051 NFKB1 JASPAR yes 99871951
chr6 11278081 11278102 MAFG JASPAR yes 70307864
chr6 11278081 11278102 MAFG JASPAR yes 99871952
chr6 11278088 11278091 MYB TRANSFAC yes 70307865
chr6 11278088 11278091 MYB TRANSFAC yes 99871953
chr6 11278100 11278114 SPI1 JASPAR yes 70307866
chr6 11278100 11278114 SPI1 JASPAR yes 99871954
chr6 11278101 11278122 ZNF263 JASPAR yes 70307867
chr6 11278101 11278122 ZNF263 JASPAR yes 99871955
chr6 11278108 11278112 YY1 TRANSFAC yes 70307868
chr6 11278108 11278112 YY1 TRANSFAC yes 99871956
chr6 11278115 11278128 SMAD2 JASPAR yes 70307869
chr6 11278115 11278128 SMAD2 JASPAR yes 99871957
chr6 11278117 11278128 E2F6 JASPAR yes 70307870
chr6 11278117 11278128 E2F6 JASPAR yes 99871958
chr6 11278119 11278139 RREB1 JASPAR yes 70307871
chr6 11278119 11278139 RREB1 JASPAR yes 99871959
chr6 11278132 11278153 IRF1 JASPAR yes 70307872
chr6 11278132 11278153 IRF1 JASPAR yes 99871960
chr6 11278148 11278153 ETS2 TRANSFAC yes 70307873
chr6 11278148 11278153 ETS2 TRANSFAC yes 99871961
chr6 11278166 11278177 EBF1 JASPAR yes 70307874
chr6 11278166 11278177 EBF1 JASPAR yes 99871962
SNP sites on vista50800[chr6:11277838-11278167]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11277906 rs1018374 T C
BATF EBF1 POLR2A RELA RUNX3
8829302
chr6 11277972 rs75529318 A C,G
BATF EBF1 POLR2A RELA RUNX3 TP53 TP63 TP73
8829303
chr6 11277975 rs77015102 T C
BATF EBF1 POLR2A RELA RUNX3 TP53 TP63 TP73
8829304
chr6 11278004 rs79232548 G A
BATF EBF1 ETV5 POLR2A RELA RUNX3
8829305
chr6 11278158 rs75272051 C T
EBF1 POLR2A RELA
8829306
Genes possibly regulated by vista50800[chr6:11277838-11278167]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista50800[chr6:11277838-11278167]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results